RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Acer1Q8R4X1 273 aa9.88□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Prss42Q8VIF2 335 aa9.88□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Srp19Q9D7A6 144 aa9.88□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Fxyd1Q9Z239 92 aa9.88□□□□□ -0.83
Topbp1-201ENSMUST00000035164 2410004P03RikA0A087WQY2 205 aa9.88□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Tex38A2A8T7 201 aa9.88□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Arxes1C0HK79 180 aa9.88□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Arxes2C0HK80 180 aa9.88□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Tmem200bD3Z0P8 284 aa9.88□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Gm3676D3Z236 184 aa9.88□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Nxpe5E0CX47 564 aa9.88□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Fabp4P04117 132 aa9.88□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Ifna7P06799 190 aa9.88□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Hoxa5P09021 270 aa9.88□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Upk2P38575 184 aa9.88□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Tcl1aP56280 116 aa9.88□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Scgb2b27Q8R1E9 112 aa9.88□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Abhd14aQ922Q6 247 aa9.88□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Q9CRC3 126 aa9.88□□□□□ -0.83
Topbp1-201ENSMUST00000035164 MyofQ69ZN7 2048 aaKnown RBP9.87□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Greb1Q3UHK3 1954 aa9.87□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Gm9964E9Q9S5 144 aa9.87□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Tnfrsf26P83626 204 aa9.87□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Mindy2Q6PDI6 601 aa9.87□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Zfp677Q6PEP4 634 aa9.87□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Gm10600Q8BQ57 223 aa9.87□□□□□ -0.83
Topbp1-201ENSMUST00000035164 PigtQ8BXQ2 582 aa9.87□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Tmem41bQ8K1A5 291 aa9.87□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Slc6a8Q8VBW1 640 aa9.87□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Pnpla3Q91WW7 413 aa9.87□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Tm4sf5Q91XF2 196 aa9.87□□□□□ -0.83
Topbp1-201ENSMUST00000035164 LitafQ9JLJ0 161 aa9.87□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Ighv5-12A0A075B5Q4 117 aa9.87□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Gm42420A0A0J9YUQ2 99 aa9.87□□□□□ -0.83
Topbp1-201ENSMUST00000035164 2010106E10RikA2ANY3 279 aa9.87□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Aadacl4B1AVU5 407 aa9.87□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Klk1b5P15945 261 aa9.87□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Tnfrsf4P47741 272 aa9.87□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Ube2g2P60605 165 aa9.87□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Cypt4Q6P925 153 aa9.87□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Zfp85Q7TMC9 473 aa9.87□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Ntng2Q8R4F1 589 aaKnown RBP9.87□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Olfr786Q8VFH8 312 aa9.87□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Olfr979Q8VH10 311 aa9.87□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Shisal2bQ9D1Y9 158 aa9.87□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Wnk2Q3UH66 2149 aa9.87□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Olfr1438-ps1A0A140LHS9 319 aa9.87□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Hist1h2bmP10854 126 aa9.87□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Drd3P30728 446 aa9.87□□□□□ -0.83
Topbp1-201ENSMUST00000035164 ShbgP97497 403 aa9.87□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Hist1h2bhQ64478 126 aa9.87□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Hist2h2bbQ64525 126 aa9.87□□□□□ -0.83
Topbp1-201ENSMUST00000035164 IslrQ6GU68 428 aa9.87□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Hist1h2bcQ6ZWY9 126 aaKnown RBP9.87□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Olfr1299Q7TQX5 312 aa9.87□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Olfr1440Q8VFV4 315 aa9.87□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Olfr181Q8VGQ7 317 aa9.87□□□□□ -0.83
Topbp1-201ENSMUST00000035164 PigcQ9CXR4 297 aa9.87□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Ighv1-54A0A075B5W5 117 aa9.87□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Wnt1P04426 370 aa9.87□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Isoc2aP85094 206 aa9.87□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Taar6Q5QD13 345 aa9.87□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Tgfbr1Q64729 503 aa9.87□□□□□ -0.83
Topbp1-201ENSMUST00000035164 H2-M10.6Q85ZW5 330 aa9.87□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Olfr588-ps1A0A1B0GSZ2 313 aa9.86□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Vmn1r138D3YTY2 306 aa9.86□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Gm8693E9PW18 306 aa9.86□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Gm4498K9J7G4 306 aa9.86□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Olfr194L7N1Y8 306 aa9.86□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Olfr203L7N205 307 aa9.86□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Vmn1r118L7N273 306 aa9.86□□□□□ -0.83
Topbp1-201ENSMUST00000035164 SellP18337 372 aa9.86□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Rab4aP56371 218 aa9.86□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Ctf2P83714 204 aa9.86□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Mrgprb2Q3KNA1 338 aa9.86□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Znf48Q3US17 591 aa9.86□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Cstl1Q80Y72 140 aa9.86□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Vmn1r4Q8R2D3 297 aa9.86□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Rpusd1Q8VCZ8 306 aa9.86□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Ear10Q923L6 156 aa9.86□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Plxna2P70207 1894 aa9.86□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Cisd3B1AR13 137 aa9.86□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Olfr196E9PYP4 309 aa9.86□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Olfr142Q60881 305 aa9.86□□□□□ -0.83
Topbp1-201ENSMUST00000035164 AtcayQ8BHE3 372 aa9.86□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Q8CF25 301 aa9.86□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Rpl7l1Q9D8M4 246 aaKnown RBP9.86□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Wdfy1E9Q4P1 410 aa9.86□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Gm5218F6YH22 154 aa9.86□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Arg2O08691 354 aa9.86□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Adcyap1O70176 175 aa9.86□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Gdf1P20863 357 aa9.86□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Q3U595 105 aa9.86□□□□□ -0.83
Topbp1-201ENSMUST00000035164 PifoQ9D9W1 207 aa9.86□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Olfr934Q9EQ87 310 aa9.86□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Scgb1b12A0A087WP21 93 aa9.86□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Slc18b1D3Z5L6 459 aa9.86□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Cited1P97769 203 aa9.86□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Sdr39u1Q5M8N4 308 aa9.86□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Olfr324Q5NCC7 333 aa9.86□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 48 ms