Protein–RNA interactions for Protein: Q8VCZ8

Rpusd1, RNA pseudouridylate synthase domain-containing protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpusd1Q8VCZ8 Gm25239-201ENSMUST00000174915 86 ntBASIC37.5■■■■□ 3.59
Rpusd1Q8VCZ8 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC34.7■■■■□ 3.15
Rpusd1Q8VCZ8 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
Rpusd1Q8VCZ8 Gm15042-201ENSMUST00000120212 883 ntBASIC32.72■■■□□ 2.83
Rpusd1Q8VCZ8 Gm24109-201ENSMUST00000175489 103 ntBASIC32.53■■■□□ 2.8
Rpusd1Q8VCZ8 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Rpusd1Q8VCZ8 Gm15045-201ENSMUST00000117359 883 ntBASIC31.99■■■□□ 2.71
Rpusd1Q8VCZ8 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
Rpusd1Q8VCZ8 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC31.67■■■□□ 2.66
Rpusd1Q8VCZ8 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Rpusd1Q8VCZ8 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
Rpusd1Q8VCZ8 Gm23366-201ENSMUST00000175022 89 ntBASIC31.33■■■□□ 2.61
Rpusd1Q8VCZ8 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Rpusd1Q8VCZ8 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31.06■■■□□ 2.56
Rpusd1Q8VCZ8 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Rpusd1Q8VCZ8 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Rpusd1Q8VCZ8 AC153911.1-202ENSMUST00000218534 1034 ntBASIC30.33■■■□□ 2.45
Rpusd1Q8VCZ8 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC30.23■■■□□ 2.43
Rpusd1Q8VCZ8 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30.19■■■□□ 2.42
Rpusd1Q8VCZ8 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC30.12■■■□□ 2.41
Rpusd1Q8VCZ8 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.09■■■□□ 2.41
Rpusd1Q8VCZ8 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC30.03■■■□□ 2.4
Rpusd1Q8VCZ8 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
Rpusd1Q8VCZ8 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Rpusd1Q8VCZ8 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
Rpusd1Q8VCZ8 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Rpusd1Q8VCZ8 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Rpusd1Q8VCZ8 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Rpusd1Q8VCZ8 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29.7■■■□□ 2.35
Rpusd1Q8VCZ8 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC29.69■■■□□ 2.34
Rpusd1Q8VCZ8 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC29.63■■■□□ 2.33
Rpusd1Q8VCZ8 Gm25238-201ENSMUST00000174914 89 ntBASIC29.61■■■□□ 2.33
Rpusd1Q8VCZ8 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Rpusd1Q8VCZ8 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29.59■■■□□ 2.33
Rpusd1Q8VCZ8 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29.58■■■□□ 2.33
Rpusd1Q8VCZ8 Psd-208ENSMUST00000224556 2034 ntBASIC29.5■■■□□ 2.31
Rpusd1Q8VCZ8 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29.34■■■□□ 2.29
Rpusd1Q8VCZ8 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC29.08■■■□□ 2.25
Rpusd1Q8VCZ8 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29.04■■■□□ 2.24
Rpusd1Q8VCZ8 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Rpusd1Q8VCZ8 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC28.87■■■□□ 2.21
Rpusd1Q8VCZ8 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
Rpusd1Q8VCZ8 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Rpusd1Q8VCZ8 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28.73■■■□□ 2.19
Rpusd1Q8VCZ8 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC28.73■■■□□ 2.19
Rpusd1Q8VCZ8 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC28.72■■■□□ 2.19
Rpusd1Q8VCZ8 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Rpusd1Q8VCZ8 Gm27325-201ENSMUST00000175467 74 ntBASIC28.66■■■□□ 2.18
Rpusd1Q8VCZ8 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Rpusd1Q8VCZ8 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC28.54■■■□□ 2.16
Rpusd1Q8VCZ8 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC28.52■■■□□ 2.16
Rpusd1Q8VCZ8 Gm25262-201ENSMUST00000174934 133 ntBASIC28.41■■■□□ 2.14
Rpusd1Q8VCZ8 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Rpusd1Q8VCZ8 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
Rpusd1Q8VCZ8 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28.23■■■□□ 2.11
Rpusd1Q8VCZ8 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Rpusd1Q8VCZ8 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Rpusd1Q8VCZ8 Rab21-202ENSMUST00000218831 843 ntBASIC28.2■■■□□ 2.1
Rpusd1Q8VCZ8 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC28.19■■■□□ 2.1
Rpusd1Q8VCZ8 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Rpusd1Q8VCZ8 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC28.12■■■□□ 2.09
Rpusd1Q8VCZ8 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC28■■■□□ 2.07
Rpusd1Q8VCZ8 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
Rpusd1Q8VCZ8 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
Rpusd1Q8VCZ8 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Rpusd1Q8VCZ8 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC27.93■■■□□ 2.06
Rpusd1Q8VCZ8 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Rpusd1Q8VCZ8 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC27.87■■■□□ 2.05
Rpusd1Q8VCZ8 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Rpusd1Q8VCZ8 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC27.85■■■□□ 2.05
Rpusd1Q8VCZ8 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC27.84■■■□□ 2.05
Rpusd1Q8VCZ8 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
Rpusd1Q8VCZ8 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC27.81■■■□□ 2.04
Rpusd1Q8VCZ8 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC27.79■■■□□ 2.04
Rpusd1Q8VCZ8 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC27.78■■■□□ 2.04
Rpusd1Q8VCZ8 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Rpusd1Q8VCZ8 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC27.76■■■□□ 2.03
Rpusd1Q8VCZ8 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Rpusd1Q8VCZ8 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Rpusd1Q8VCZ8 Gm26115-201ENSMUST00000175605 87 ntBASIC27.72■■■□□ 2.03
Rpusd1Q8VCZ8 Gm10524-201ENSMUST00000181931 1893 ntBASIC27.7■■■□□ 2.03
Rpusd1Q8VCZ8 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC27.68■■■□□ 2.02
Rpusd1Q8VCZ8 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
Rpusd1Q8VCZ8 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Rpusd1Q8VCZ8 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC27.63■■■□□ 2.01
Rpusd1Q8VCZ8 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
Rpusd1Q8VCZ8 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Rpusd1Q8VCZ8 Gm8109-201ENSMUST00000194076 746 ntBASIC27.55■■■□□ 2
Rpusd1Q8VCZ8 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Rpusd1Q8VCZ8 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.55■■■□□ 2
Rpusd1Q8VCZ8 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC27.49■■□□□ 1.99
Rpusd1Q8VCZ8 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC27.49■■□□□ 1.99
Rpusd1Q8VCZ8 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC27.46■■□□□ 1.99
Rpusd1Q8VCZ8 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC27.46■■□□□ 1.99
Rpusd1Q8VCZ8 CT025624.2-201ENSMUST00000223609 1909 ntBASIC27.43■■□□□ 1.98
Rpusd1Q8VCZ8 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC27.4■■□□□ 1.98
Rpusd1Q8VCZ8 Gm42596-201ENSMUST00000196305 1958 ntBASIC27.37■■□□□ 1.97
Rpusd1Q8VCZ8 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Rpusd1Q8VCZ8 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.96
Rpusd1Q8VCZ8 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Retrieved 100 of 76,532 protein–RNA pairs in 10 ms