Protein–RNA interactions for Protein: Q8R2D3

Vmn1r4, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r4Q8R2D3 Gm25239-201ENSMUST00000174915 86 ntBASIC30.37■■■□□ 2.45
Vmn1r4Q8R2D3 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Vmn1r4Q8R2D3 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Vmn1r4Q8R2D3 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC28.12■■■□□ 2.09
Vmn1r4Q8R2D3 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
Vmn1r4Q8R2D3 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Vmn1r4Q8R2D3 Psd-208ENSMUST00000224556 2034 ntBASIC27.14■■□□□ 1.94
Vmn1r4Q8R2D3 Gm15042-201ENSMUST00000120212 883 ntBASIC27.11■■□□□ 1.93
Vmn1r4Q8R2D3 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Vmn1r4Q8R2D3 Gm15045-201ENSMUST00000117359 883 ntBASIC26.6■■□□□ 1.85
Vmn1r4Q8R2D3 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
Vmn1r4Q8R2D3 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Vmn1r4Q8R2D3 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC26.36■■□□□ 1.81
Vmn1r4Q8R2D3 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Vmn1r4Q8R2D3 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Vmn1r4Q8R2D3 Gm24109-201ENSMUST00000175489 103 ntBASIC26.07■■□□□ 1.76
Vmn1r4Q8R2D3 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Vmn1r4Q8R2D3 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Vmn1r4Q8R2D3 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Vmn1r4Q8R2D3 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Vmn1r4Q8R2D3 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
Vmn1r4Q8R2D3 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
Vmn1r4Q8R2D3 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
Vmn1r4Q8R2D3 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Vmn1r4Q8R2D3 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
Vmn1r4Q8R2D3 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC25.6■■□□□ 1.69
Vmn1r4Q8R2D3 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
Vmn1r4Q8R2D3 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Vmn1r4Q8R2D3 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
Vmn1r4Q8R2D3 Gm23366-201ENSMUST00000175022 89 ntBASIC25.44■■□□□ 1.66
Vmn1r4Q8R2D3 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Vmn1r4Q8R2D3 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC25.39■■□□□ 1.65
Vmn1r4Q8R2D3 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Vmn1r4Q8R2D3 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
Vmn1r4Q8R2D3 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Vmn1r4Q8R2D3 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Vmn1r4Q8R2D3 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Vmn1r4Q8R2D3 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Vmn1r4Q8R2D3 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.61
Vmn1r4Q8R2D3 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Vmn1r4Q8R2D3 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC24.93■■□□□ 1.58
Vmn1r4Q8R2D3 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC24.92■■□□□ 1.58
Vmn1r4Q8R2D3 AC153911.1-202ENSMUST00000218534 1034 ntBASIC24.89■■□□□ 1.58
Vmn1r4Q8R2D3 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC24.88■■□□□ 1.57
Vmn1r4Q8R2D3 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
Vmn1r4Q8R2D3 Gm10524-201ENSMUST00000181931 1893 ntBASIC24.82■■□□□ 1.56
Vmn1r4Q8R2D3 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Vmn1r4Q8R2D3 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Vmn1r4Q8R2D3 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Vmn1r4Q8R2D3 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Vmn1r4Q8R2D3 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Vmn1r4Q8R2D3 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Vmn1r4Q8R2D3 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Vmn1r4Q8R2D3 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC24.3■■□□□ 1.48
Vmn1r4Q8R2D3 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Vmn1r4Q8R2D3 CT025624.2-201ENSMUST00000223609 1909 ntBASIC24.25■■□□□ 1.47
Vmn1r4Q8R2D3 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Vmn1r4Q8R2D3 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.47
Vmn1r4Q8R2D3 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
Vmn1r4Q8R2D3 Gm42596-201ENSMUST00000196305 1958 ntBASIC24.12■■□□□ 1.45
Vmn1r4Q8R2D3 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Vmn1r4Q8R2D3 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC24.08■■□□□ 1.45
Vmn1r4Q8R2D3 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
Vmn1r4Q8R2D3 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Vmn1r4Q8R2D3 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Vmn1r4Q8R2D3 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC24.04■■□□□ 1.44
Vmn1r4Q8R2D3 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Vmn1r4Q8R2D3 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Vmn1r4Q8R2D3 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
Vmn1r4Q8R2D3 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Vmn1r4Q8R2D3 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
Vmn1r4Q8R2D3 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC23.91■■□□□ 1.42
Vmn1r4Q8R2D3 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Vmn1r4Q8R2D3 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Vmn1r4Q8R2D3 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Vmn1r4Q8R2D3 Gm27325-201ENSMUST00000175467 74 ntBASIC23.84■■□□□ 1.41
Vmn1r4Q8R2D3 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Vmn1r4Q8R2D3 Gm25238-201ENSMUST00000174914 89 ntBASIC23.79■■□□□ 1.4
Vmn1r4Q8R2D3 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Vmn1r4Q8R2D3 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Vmn1r4Q8R2D3 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Vmn1r4Q8R2D3 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC23.75■■□□□ 1.39
Vmn1r4Q8R2D3 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Vmn1r4Q8R2D3 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC23.7■■□□□ 1.38
Vmn1r4Q8R2D3 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Vmn1r4Q8R2D3 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC23.6■■□□□ 1.37
Vmn1r4Q8R2D3 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Vmn1r4Q8R2D3 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Vmn1r4Q8R2D3 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Vmn1r4Q8R2D3 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Vmn1r4Q8R2D3 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Vmn1r4Q8R2D3 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Vmn1r4Q8R2D3 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Vmn1r4Q8R2D3 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Vmn1r4Q8R2D3 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Vmn1r4Q8R2D3 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
Vmn1r4Q8R2D3 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Vmn1r4Q8R2D3 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Vmn1r4Q8R2D3 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Vmn1r4Q8R2D3 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC23.39■■□□□ 1.33
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms