Protein–RNA interactions for Protein: P56280

Tcl1a, T-cell leukemia/lymphoma protein 1A, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcl1aP56280 Gm25239-201ENSMUST00000174915 86 ntBASIC33,66■■■□□ 2,98
Tcl1aP56280 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC30,98■■■□□ 2,55
Tcl1aP56280 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC30,6■■■□□ 2,49
Tcl1aP56280 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC30,43■■■□□ 2,46
Tcl1aP56280 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC29,73■■■□□ 2,35
Tcl1aP56280 Gm15042-201ENSMUST00000120212 883 ntBASIC29,72■■■□□ 2,35
Tcl1aP56280 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC29,42■■■□□ 2,3
Tcl1aP56280 Gm15045-201ENSMUST00000117359 883 ntBASIC29,08■■■□□ 2,25
Tcl1aP56280 Gm24109-201ENSMUST00000175489 103 ntBASIC29,01■■■□□ 2,23
Tcl1aP56280 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC28,72■■■□□ 2,19
Tcl1aP56280 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC28,53■■■□□ 2,16
Tcl1aP56280 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC28,38■■■□□ 2,13
Tcl1aP56280 Gm23366-201ENSMUST00000175022 89 ntBASIC28,17■■■□□ 2,1
Tcl1aP56280 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC28,17■■■□□ 2,1
Tcl1aP56280 Psd-208ENSMUST00000224556 2034 ntBASIC28,14■■■□□ 2,09
Tcl1aP56280 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC28,12■■■□□ 2,09
Tcl1aP56280 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC27,99■■■□□ 2,07
Tcl1aP56280 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC27,91■■■□□ 2,06
Tcl1aP56280 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC27,89■■■□□ 2,06
Tcl1aP56280 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC27,79■■■□□ 2,04
Tcl1aP56280 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC27,71■■■□□ 2,03
Tcl1aP56280 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC27,68■■■□□ 2,02
Tcl1aP56280 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC27,58■■■□□ 2,01
Tcl1aP56280 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC27,56■■■□□ 2
Tcl1aP56280 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC27,48■■□□□ 1,99
Tcl1aP56280 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC27,45■■□□□ 1,98
Tcl1aP56280 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC27,43■■□□□ 1,98
Tcl1aP56280 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC27,36■■□□□ 1,97
Tcl1aP56280 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC27,3■■□□□ 1,96
Tcl1aP56280 AC153911.1-202ENSMUST00000218534 1034 ntBASIC27,28■■□□□ 1,96
Tcl1aP56280 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC27,21■■□□□ 1,95
Tcl1aP56280 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC27,06■■□□□ 1,92
Tcl1aP56280 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1,91
Tcl1aP56280 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC26,92■■□□□ 1,9
Tcl1aP56280 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC26,84■■□□□ 1,89
Tcl1aP56280 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC26,63■■□□□ 1,85
Tcl1aP56280 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC26,61■■□□□ 1,85
Tcl1aP56280 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC26,61■■□□□ 1,85
Tcl1aP56280 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC26,58■■□□□ 1,85
Tcl1aP56280 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC26,57■■□□□ 1,84
Tcl1aP56280 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26,56■■□□□ 1,84
Tcl1aP56280 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC26,56■■□□□ 1,84
Tcl1aP56280 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC26,5■■□□□ 1,83
Tcl1aP56280 Gm25238-201ENSMUST00000174914 89 ntBASIC26,45■■□□□ 1,82
Tcl1aP56280 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC26,44■■□□□ 1,82
Tcl1aP56280 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC26,43■■□□□ 1,82
Tcl1aP56280 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC26,35■■□□□ 1,81
Tcl1aP56280 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC26,33■■□□□ 1,8
Tcl1aP56280 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC26,32■■□□□ 1,8
Tcl1aP56280 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC26,26■■□□□ 1,79
Tcl1aP56280 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC26,25■■□□□ 1,79
Tcl1aP56280 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC26,21■■□□□ 1,79
Tcl1aP56280 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC26,15■■□□□ 1,78
Tcl1aP56280 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC26,12■■□□□ 1,77
Tcl1aP56280 Gm10524-201ENSMUST00000181931 1893 ntBASIC26,12■■□□□ 1,77
Tcl1aP56280 Gm27325-201ENSMUST00000175467 74 ntBASIC26,08■■□□□ 1,77
Tcl1aP56280 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC26,04■■□□□ 1,76
Tcl1aP56280 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC26,02■■□□□ 1,76
Tcl1aP56280 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC26,01■■□□□ 1,75
Tcl1aP56280 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC25,98■■□□□ 1,75
Tcl1aP56280 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC25,93■■□□□ 1,74
Tcl1aP56280 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC25,92■■□□□ 1,74
Tcl1aP56280 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC25,91■■□□□ 1,74
Tcl1aP56280 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC25,86■■□□□ 1,73
Tcl1aP56280 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC25,85■■□□□ 1,73
Tcl1aP56280 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC25,79■■□□□ 1,72
Tcl1aP56280 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC25,76■■□□□ 1,71
Tcl1aP56280 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC25,73■■□□□ 1,71
Tcl1aP56280 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC25,73■■□□□ 1,71
Tcl1aP56280 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC25,71■■□□□ 1,71
Tcl1aP56280 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC25,71■■□□□ 1,71
Tcl1aP56280 CT025624.2-201ENSMUST00000223609 1909 ntBASIC25,71■■□□□ 1,71
Tcl1aP56280 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC25,7■■□□□ 1,7
Tcl1aP56280 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC25,7■■□□□ 1,7
Tcl1aP56280 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC25,68■■□□□ 1,7
Tcl1aP56280 Gm42596-201ENSMUST00000196305 1958 ntBASIC25,6■■□□□ 1,69
Tcl1aP56280 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC25,54■■□□□ 1,68
Tcl1aP56280 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC25,51■■□□□ 1,67
Tcl1aP56280 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC25,5■■□□□ 1,67
Tcl1aP56280 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC25,44■■□□□ 1,66
Tcl1aP56280 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC25,43■■□□□ 1,66
Tcl1aP56280 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC25,43■■□□□ 1,66
Tcl1aP56280 Rab21-202ENSMUST00000218831 843 ntBASIC25,42■■□□□ 1,66
Tcl1aP56280 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC25,37■■□□□ 1,65
Tcl1aP56280 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC25,3■■□□□ 1,64
Tcl1aP56280 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC25,3■■□□□ 1,64
Tcl1aP56280 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC25,27■■□□□ 1,64
Tcl1aP56280 Gm25262-201ENSMUST00000174934 133 ntBASIC25,21■■□□□ 1,63
Tcl1aP56280 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC25,18■■□□□ 1,62
Tcl1aP56280 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC25,17■■□□□ 1,62
Tcl1aP56280 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC25,15■■□□□ 1,62
Tcl1aP56280 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC25,15■■□□□ 1,62
Tcl1aP56280 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC25,13■■□□□ 1,61
Tcl1aP56280 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC25,13■■□□□ 1,61
Tcl1aP56280 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC25,11■■□□□ 1,61
Tcl1aP56280 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC25,08■■□□□ 1,61
Tcl1aP56280 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC25,04■■□□□ 1,6
Tcl1aP56280 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC25,01■■□□□ 1,59
Tcl1aP56280 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC25,01■■□□□ 1,59
Tcl1aP56280 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC24,98■■□□□ 1,59
Retrieved 100 of 76,532 protein–RNA pairs in 11,5 ms