Protein–RNA interactions for Protein: P56280

Tcl1a, T-cell leukemia/lymphoma protein 1A, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcl1aP56280 Gm25239-201ENSMUST00000174915 86 ntBASIC33.66■■■□□ 2.98
Tcl1aP56280 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
Tcl1aP56280 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Tcl1aP56280 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Tcl1aP56280 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Tcl1aP56280 Gm15042-201ENSMUST00000120212 883 ntBASIC29.72■■■□□ 2.35
Tcl1aP56280 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC29.42■■■□□ 2.3
Tcl1aP56280 Gm15045-201ENSMUST00000117359 883 ntBASIC29.08■■■□□ 2.25
Tcl1aP56280 Gm24109-201ENSMUST00000175489 103 ntBASIC29.01■■■□□ 2.23
Tcl1aP56280 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Tcl1aP56280 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Tcl1aP56280 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC28.38■■■□□ 2.13
Tcl1aP56280 Gm23366-201ENSMUST00000175022 89 ntBASIC28.17■■■□□ 2.1
Tcl1aP56280 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Tcl1aP56280 Psd-208ENSMUST00000224556 2034 ntBASIC28.14■■■□□ 2.09
Tcl1aP56280 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC28.12■■■□□ 2.09
Tcl1aP56280 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Tcl1aP56280 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Tcl1aP56280 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC27.89■■■□□ 2.06
Tcl1aP56280 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC27.79■■■□□ 2.04
Tcl1aP56280 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Tcl1aP56280 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Tcl1aP56280 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC27.58■■■□□ 2.01
Tcl1aP56280 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC27.56■■■□□ 2
Tcl1aP56280 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC27.48■■□□□ 1.99
Tcl1aP56280 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Tcl1aP56280 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC27.43■■□□□ 1.98
Tcl1aP56280 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC27.36■■□□□ 1.97
Tcl1aP56280 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Tcl1aP56280 AC153911.1-202ENSMUST00000218534 1034 ntBASIC27.28■■□□□ 1.96
Tcl1aP56280 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Tcl1aP56280 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC27.06■■□□□ 1.92
Tcl1aP56280 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Tcl1aP56280 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
Tcl1aP56280 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC26.84■■□□□ 1.89
Tcl1aP56280 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC26.63■■□□□ 1.85
Tcl1aP56280 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Tcl1aP56280 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Tcl1aP56280 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC26.58■■□□□ 1.85
Tcl1aP56280 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Tcl1aP56280 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
Tcl1aP56280 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Tcl1aP56280 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Tcl1aP56280 Gm25238-201ENSMUST00000174914 89 ntBASIC26.45■■□□□ 1.82
Tcl1aP56280 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Tcl1aP56280 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC26.43■■□□□ 1.82
Tcl1aP56280 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Tcl1aP56280 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
Tcl1aP56280 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC26.32■■□□□ 1.8
Tcl1aP56280 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Tcl1aP56280 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Tcl1aP56280 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Tcl1aP56280 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
Tcl1aP56280 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Tcl1aP56280 Gm10524-201ENSMUST00000181931 1893 ntBASIC26.12■■□□□ 1.77
Tcl1aP56280 Gm27325-201ENSMUST00000175467 74 ntBASIC26.08■■□□□ 1.77
Tcl1aP56280 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC26.04■■□□□ 1.76
Tcl1aP56280 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Tcl1aP56280 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Tcl1aP56280 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC25.98■■□□□ 1.75
Tcl1aP56280 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Tcl1aP56280 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC25.92■■□□□ 1.74
Tcl1aP56280 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Tcl1aP56280 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC25.86■■□□□ 1.73
Tcl1aP56280 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
Tcl1aP56280 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC25.79■■□□□ 1.72
Tcl1aP56280 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Tcl1aP56280 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Tcl1aP56280 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
Tcl1aP56280 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Tcl1aP56280 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Tcl1aP56280 CT025624.2-201ENSMUST00000223609 1909 ntBASIC25.71■■□□□ 1.71
Tcl1aP56280 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC25.7■■□□□ 1.7
Tcl1aP56280 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC25.7■■□□□ 1.7
Tcl1aP56280 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Tcl1aP56280 Gm42596-201ENSMUST00000196305 1958 ntBASIC25.6■■□□□ 1.69
Tcl1aP56280 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Tcl1aP56280 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
Tcl1aP56280 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Tcl1aP56280 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC25.44■■□□□ 1.66
Tcl1aP56280 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC25.43■■□□□ 1.66
Tcl1aP56280 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Tcl1aP56280 Rab21-202ENSMUST00000218831 843 ntBASIC25.42■■□□□ 1.66
Tcl1aP56280 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Tcl1aP56280 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Tcl1aP56280 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC25.3■■□□□ 1.64
Tcl1aP56280 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Tcl1aP56280 Gm25262-201ENSMUST00000174934 133 ntBASIC25.21■■□□□ 1.63
Tcl1aP56280 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Tcl1aP56280 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Tcl1aP56280 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC25.15■■□□□ 1.62
Tcl1aP56280 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Tcl1aP56280 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
Tcl1aP56280 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
Tcl1aP56280 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Tcl1aP56280 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Tcl1aP56280 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC25.04■■□□□ 1.6
Tcl1aP56280 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Tcl1aP56280 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC25.01■■□□□ 1.59
Tcl1aP56280 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms