Protein–RNA interactions for Protein: Q8R1E9

Scgb2b27, ABPBG27, mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scgb2b27Q8R1E9 Gm25239-201ENSMUST00000174915 86 ntBASIC31,75■■■□□ 2,67
Scgb2b27Q8R1E9 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC29,41■■■□□ 2,3
Scgb2b27Q8R1E9 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC29,14■■■□□ 2,26
Scgb2b27Q8R1E9 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC28,84■■■□□ 2,21
Scgb2b27Q8R1E9 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC28,67■■■□□ 2,18
Scgb2b27Q8R1E9 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC28,44■■■□□ 2,14
Scgb2b27Q8R1E9 Gm15042-201ENSMUST00000120212 883 ntBASIC28,17■■■□□ 2,1
Scgb2b27Q8R1E9 Gm15045-201ENSMUST00000117359 883 ntBASIC27,57■■■□□ 2
Scgb2b27Q8R1E9 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC27,47■■□□□ 1,99
Scgb2b27Q8R1E9 Gm24109-201ENSMUST00000175489 103 ntBASIC27,28■■□□□ 1,96
Scgb2b27Q8R1E9 Psd-208ENSMUST00000224556 2034 ntBASIC27,27■■□□□ 1,96
Scgb2b27Q8R1E9 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC27,2■■□□□ 1,94
Scgb2b27Q8R1E9 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC26,96■■□□□ 1,91
Scgb2b27Q8R1E9 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC26,92■■□□□ 1,9
Scgb2b27Q8R1E9 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC26,88■■□□□ 1,89
Scgb2b27Q8R1E9 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC26,76■■□□□ 1,87
Scgb2b27Q8R1E9 Gm23366-201ENSMUST00000175022 89 ntBASIC26,6■■□□□ 1,85
Scgb2b27Q8R1E9 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC26,58■■□□□ 1,85
Scgb2b27Q8R1E9 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC26,51■■□□□ 1,83
Scgb2b27Q8R1E9 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC26,46■■□□□ 1,83
Scgb2b27Q8R1E9 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC26,42■■□□□ 1,82
Scgb2b27Q8R1E9 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC26,42■■□□□ 1,82
Scgb2b27Q8R1E9 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC26,41■■□□□ 1,82
Scgb2b27Q8R1E9 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26,36■■□□□ 1,81
Scgb2b27Q8R1E9 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC26,34■■□□□ 1,81
Scgb2b27Q8R1E9 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC26,32■■□□□ 1,8
Scgb2b27Q8R1E9 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC26,25■■□□□ 1,79
Scgb2b27Q8R1E9 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC26,23■■□□□ 1,79
Scgb2b27Q8R1E9 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC26,19■■□□□ 1,78
Scgb2b27Q8R1E9 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC26,12■■□□□ 1,77
Scgb2b27Q8R1E9 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC26,05■■□□□ 1,76
Scgb2b27Q8R1E9 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC25,97■■□□□ 1,75
Scgb2b27Q8R1E9 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC25,93■■□□□ 1,74
Scgb2b27Q8R1E9 AC153911.1-202ENSMUST00000218534 1034 ntBASIC25,87■■□□□ 1,73
Scgb2b27Q8R1E9 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC25,85■■□□□ 1,73
Scgb2b27Q8R1E9 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC25,72■■□□□ 1,71
Scgb2b27Q8R1E9 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC25,7■■□□□ 1,7
Scgb2b27Q8R1E9 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC25,67■■□□□ 1,7
Scgb2b27Q8R1E9 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC25,53■■□□□ 1,68
Scgb2b27Q8R1E9 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC25,52■■□□□ 1,68
Scgb2b27Q8R1E9 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC25,43■■□□□ 1,66
Scgb2b27Q8R1E9 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC25,27■■□□□ 1,64
Scgb2b27Q8R1E9 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC25,22■■□□□ 1,63
Scgb2b27Q8R1E9 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC25,21■■□□□ 1,63
Scgb2b27Q8R1E9 Gm10524-201ENSMUST00000181931 1893 ntBASIC25,21■■□□□ 1,63
Scgb2b27Q8R1E9 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC25,18■■□□□ 1,62
Scgb2b27Q8R1E9 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC25,18■■□□□ 1,62
Scgb2b27Q8R1E9 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC25,09■■□□□ 1,61
Scgb2b27Q8R1E9 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC25,09■■□□□ 1,61
Scgb2b27Q8R1E9 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC25,08■■□□□ 1,61
Scgb2b27Q8R1E9 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC25■■□□□ 1,59
Scgb2b27Q8R1E9 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC24,99■■□□□ 1,59
Scgb2b27Q8R1E9 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC24,99■■□□□ 1,59
Scgb2b27Q8R1E9 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC24,94■■□□□ 1,58
Scgb2b27Q8R1E9 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC24,92■■□□□ 1,58
Scgb2b27Q8R1E9 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC24,91■■□□□ 1,58
Scgb2b27Q8R1E9 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC24,9■■□□□ 1,58
Scgb2b27Q8R1E9 Gm25238-201ENSMUST00000174914 89 ntBASIC24,89■■□□□ 1,58
Scgb2b27Q8R1E9 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC24,82■■□□□ 1,56
Scgb2b27Q8R1E9 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC24,78■■□□□ 1,56
Scgb2b27Q8R1E9 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC24,78■■□□□ 1,56
Scgb2b27Q8R1E9 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC24,75■■□□□ 1,55
Scgb2b27Q8R1E9 Gm27325-201ENSMUST00000175467 74 ntBASIC24,74■■□□□ 1,55
Scgb2b27Q8R1E9 CT025624.2-201ENSMUST00000223609 1909 ntBASIC24,73■■□□□ 1,55
Scgb2b27Q8R1E9 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC24,71■■□□□ 1,55
Scgb2b27Q8R1E9 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC24,7■■□□□ 1,55
Scgb2b27Q8R1E9 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC24,7■■□□□ 1,54
Scgb2b27Q8R1E9 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC24,69■■□□□ 1,54
Scgb2b27Q8R1E9 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC24,67■■□□□ 1,54
Scgb2b27Q8R1E9 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC24,62■■□□□ 1,53
Scgb2b27Q8R1E9 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC24,58■■□□□ 1,53
Scgb2b27Q8R1E9 Gm42596-201ENSMUST00000196305 1958 ntBASIC24,58■■□□□ 1,52
Scgb2b27Q8R1E9 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC24,51■■□□□ 1,51
Scgb2b27Q8R1E9 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC24,49■■□□□ 1,51
Scgb2b27Q8R1E9 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC24,44■■□□□ 1,5
Scgb2b27Q8R1E9 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC24,35■■□□□ 1,49
Scgb2b27Q8R1E9 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC24,35■■□□□ 1,49
Scgb2b27Q8R1E9 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC24,3■■□□□ 1,48
Scgb2b27Q8R1E9 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC24,29■■□□□ 1,48
Scgb2b27Q8R1E9 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC24,26■■□□□ 1,47
Scgb2b27Q8R1E9 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC24,21■■□□□ 1,47
Scgb2b27Q8R1E9 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC24,2■■□□□ 1,46
Scgb2b27Q8R1E9 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC24,2■■□□□ 1,46
Scgb2b27Q8R1E9 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC24,19■■□□□ 1,46
Scgb2b27Q8R1E9 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC24,19■■□□□ 1,46
Scgb2b27Q8R1E9 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC24,19■■□□□ 1,46
Scgb2b27Q8R1E9 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC24,16■■□□□ 1,46
Scgb2b27Q8R1E9 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC24,15■■□□□ 1,46
Scgb2b27Q8R1E9 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC24,1■■□□□ 1,45
Scgb2b27Q8R1E9 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC24,08■■□□□ 1,45
Scgb2b27Q8R1E9 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC24,07■■□□□ 1,44
Scgb2b27Q8R1E9 Rab21-202ENSMUST00000218831 843 ntBASIC24,05■■□□□ 1,44
Scgb2b27Q8R1E9 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC24,05■■□□□ 1,44
Scgb2b27Q8R1E9 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC24,02■■□□□ 1,44
Scgb2b27Q8R1E9 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC24,02■■□□□ 1,44
Scgb2b27Q8R1E9 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1,43
Scgb2b27Q8R1E9 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC23,99■■□□□ 1,43
Scgb2b27Q8R1E9 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC23,99■■□□□ 1,43
Scgb2b27Q8R1E9 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC23,95■■□□□ 1,42
Scgb2b27Q8R1E9 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC23,92■■□□□ 1,42
Retrieved 100 of 76,532 protein–RNA pairs in 11,4 ms