RNA–Protein interactions for RNA: snR38

snR38, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR38, Length 95 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR38	snR38	TAD1	P53065	400 aa		0.21	□□□□□ -2.38
snR38	snR38	COX18	P53239	316 aa		0.21	□□□□□ -2.38
snR38	snR38	SNF12	P53628	566 aa		0.21	□□□□□ -2.38
snR38	snR38	DIG1	Q03063	452 aa	Known RBP	0.21	□□□□□ -2.38
snR38	snR38	REH1	Q06709	432 aa		0.21	□□□□□ -2.38
snR38	snR38	YBR298C-A	Q8TGK4	73 aa		0.21	□□□□□ -2.38
snR38	snR38	SEC3	P33332	1336 aa	Known RBP	0.2	□□□□□ -2.38
snR38	snR38	PMS1	P14242	873 aa		0.2	□□□□□ -2.38
snR38	snR38	AGP1	P25376	633 aa		0.2	□□□□□ -2.38
snR38	snR38	FEN2	P25621	512 aa	Known RBP	0.2	□□□□□ -2.38
snR38	snR38	CDC11	P32458	415 aa		0.2	□□□□□ -2.38
snR38	snR38	MSN2	P33748	704 aa		0.2	□□□□□ -2.38
snR38	snR38	MGE1	P38523	228 aa		0.2	□□□□□ -2.38
snR38	snR38	SPG5	P42933	373 aa		0.2	□□□□□ -2.38
snR38	snR38	YPI1	P43587	155 aa		0.2	□□□□□ -2.38
snR38	snR38	NOP9	P47077	666 aa	Known RBP	0.2	□□□□□ -2.38
snR38	snR38	CUL3	P53202	744 aa		0.2	□□□□□ -2.38
snR38	snR38	RBG2	P53295	368 aa	Known RBP	0.2	□□□□□ -2.38
snR38	snR38	YML020W	Q03722	664 aa		0.2	□□□□□ -2.38
snR38	snR38	MSC6	Q08818	692 aa	Known RBP	0.2	□□□□□ -2.38
snR38	snR38	ENV7	Q12003	364 aa		0.2	□□□□□ -2.38
snR38	snR38	PPT2	Q12036	173 aa		0.2	□□□□□ -2.38
snR38	snR38	YRM1	Q12340	786 aa		0.2	□□□□□ -2.38
snR38	snR38	DIF1	O13577	133 aa		0.19	□□□□□ -2.38
snR38	snR38	ILS1	P09436	1072 aa	Known RBP	0.19	□□□□□ -2.38
snR38	snR38	YFL068W	P0CX99	160 aa		0.19	□□□□□ -2.38
snR38	snR38	YLL066W-A	P0CY00	160 aa		0.19	□□□□□ -2.38
snR38	snR38	YLL067W-A	P0CY01	160 aa		0.19	□□□□□ -2.38
snR38	snR38	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	0.19	□□□□□ -2.38	not detected
snR38	snR38	GSH1	P32477	678 aa		0.19	□□□□□ -2.38
snR38	snR38	PRE5	P40302	234 aa	Known RBP	0.19	□□□□□ -2.38
snR38	snR38	RSC8	P43609	557 aa	Known RBP	0.19	□□□□□ -2.38
snR38	snR38	RFX1	P48743	811 aa		0.19	□□□□□ -2.38
snR38	snR38	YGL039W	P53183	348 aa	Known RBP	0.19	□□□□□ -2.38
snR38	snR38	YNL018C	P53976	612 aa		0.19	□□□□□ -2.38
snR38	snR38	BUL2	Q03758	920 aa	Known RBP	0.19	□□□□□ -2.38
snR38	snR38	HMO1	Q03973	246 aa	Known RBP	0.19	□□□□□ -2.38
snR38	snR38	LRS4	Q04087	347 aa	Known RBP	0.19	□□□□□ -2.38
snR38	snR38	SVF1	Q05515	481 aa		0.19	□□□□□ -2.38
snR38	snR38	YPL216W	Q08964	1102 aa		0.19	□□□□□ -2.38
snR38	snR38	TGS1	Q12052	315 aa		0.19	□□□□□ -2.38
snR38	snR38	RAD4	P14736	754 aa		0.18	□□□□□ -2.38
snR38	snR38	CDC23	P16522	626 aa		0.18	□□□□□ -2.38
snR38	snR38	SEC20	P28791	383 aa		0.18	□□□□□ -2.38
snR38	snR38	SEC6	P32844	805 aa		0.18	□□□□□ -2.38
snR38	snR38	PRS1	P32895	427 aa	Known RBP	0.18	□□□□□ -2.38
snR38	snR38	DUT1	P33317	147 aa		0.18	□□□□□ -2.38
snR38	snR38	KRE9	P39005	276 aa		0.18	□□□□□ -2.38
snR38	snR38	RLP7	P40693	322 aa	Known RBP	0.18	□□□□□ -2.38
snR38	snR38	TDA10	P42938	290 aa		0.18	□□□□□ -2.38
snR38	snR38	YFL015C	P43578	164 aa		0.18	□□□□□ -2.38
snR38	snR38	SAE2	P46946	345 aa		0.18	□□□□□ -2.38
snR38	snR38	YPT11	P48559	417 aa		0.18	□□□□□ -2.38
snR38	snR38	RMD1	Q03441	430 aa		0.18	□□□□□ -2.38
snR38	snR38	CEF1	Q03654	590 aa	Predicted RBP	0.18	□□□□□ -2.38
snR38	snR38	PAL1	Q05518	499 aa	Known RBP	0.18	□□□□□ -2.38
snR38	snR38	RPN7	Q06103	429 aa	Known RBP	0.18	□□□□□ -2.38
snR38	snR38	ESC2	Q06340	456 aa		0.18	□□□□□ -2.38
snR38	snR38	GSH2	Q08220	491 aa		0.18	□□□□□ -2.38
snR38	snR38	CRT10	Q08226	957 aa		0.18	□□□□□ -2.38
snR38	snR38	WHI5	Q12416	295 aa		0.18	□□□□□ -2.38
snR38	snR38	ECM3	Q99252	613 aa		0.18	□□□□□ -2.38
snR38	snR38	CET1	O13297	549 aa	Predicted RBP	0.17	□□□□□ -2.38
snR38	snR38	YCL002C	P25565	263 aa		0.17	□□□□□ -2.38
snR38	snR38	SWC3	P31376	625 aa		0.17	□□□□□ -2.38
snR38	snR38	ERT1	P38140	529 aa		0.17	□□□□□ -2.38
snR38	snR38	YBP1	P38315	674 aa		0.17	□□□□□ -2.38
snR38	snR38	YIL077C	P40508	320 aa		0.17	□□□□□ -2.38
snR38	snR38	YIP4	P53093	235 aa		0.17	□□□□□ -2.38
snR38	snR38	SPO1	P53541	631 aa		0.17	□□□□□ -2.38
snR38	snR38	YNL144C	P53907	740 aa		0.17	□□□□□ -2.38
snR38	snR38	OYE2	Q03558	400 aa	Known RBP	0.17	□□□□□ -2.38
snR38	snR38	SNU56	Q03782	492 aa	Known RBP	0.17	□□□□□ -2.38
snR38	snR38	SHE9	Q04172	456 aa		0.17	□□□□□ -2.38
snR38	snR38	ECM16	Q04217	1267 aa	Known RBP	0.17	□□□□□ -2.38
snR38	snR38	YDL012C	Q12489	107 aa		0.17	□□□□□ -2.38
snR38	snR38	YBR182C-A	Q8TGU6	64 aa		0.17	□□□□□ -2.38
snR38	snR38	BI3	Q9ZZW7	517 aa		0.17	□□□□□ -2.38
snR38	snR38	SOD1	P00445	154 aa	Known RBP	0.16	□□□□□ -2.38
snR38	snR38	PER1	P25625	357 aa		0.16	□□□□□ -2.38
snR38	snR38	PPG1	P32838	368 aa		0.16	□□□□□ -2.38
snR38	snR38	OCT1	P35999	772 aa		0.16	□□□□□ -2.38
snR38	snR38	BRN1	P38170	754 aa		0.16	□□□□□ -2.38
snR38	snR38	COS111	P38308	924 aa		0.16	□□□□□ -2.38
snR38	snR38	MIP6	P38760	659 aa	Known RBP	0.16	□□□□□ -2.38
snR38	snR38	TIF4631	P39935	952 aa	Known RBP	0.16	□□□□□ -2.38
snR38	snR38	PCL6	P40038	420 aa		0.16	□□□□□ -2.38
snR38	snR38	SMK1	P41808	388 aa		0.16	□□□□□ -2.38
snR38	snR38	MFM1	Q02783	413 aa		0.16	□□□□□ -2.38
snR38	snR38	WAR1	Q03631	944 aa		0.16	□□□□□ -2.38
snR38	snR38	YDR514C	Q04408	483 aa		0.16	□□□□□ -2.38
snR38	snR38	COG8	Q04632	607 aa		0.16	□□□□□ -2.38
snR38	snR38	ECM22	Q05958	814 aa	Predicted RBP	0.16	□□□□□ -2.38
snR38	snR38	YFT2	Q06676	274 aa		0.16	□□□□□ -2.38
snR38	snR38	SPO75	Q07798	868 aa		0.16	□□□□□ -2.38
snR38	snR38	POM34	Q12445	299 aa		0.16	□□□□□ -2.38
snR38	snR38	RNR3	P21672	869 aa	Known RBP	0.15	□□□□□ -2.39
snR38	snR38	MSS1	P32559	526 aa	Predicted RBP	0.15	□□□□□ -2.39
snR38	snR38	MNR2	P35724	969 aa		0.15	□□□□□ -2.39
snR38	snR38	EMC3	P36039	253 aa		0.15	□□□□□ -2.39

Retrieved 100 of 5,963 RNA–protein pairs in 30 ms