RNA–Protein interactions for RNA: YPR173C

VPS4, Transcript of AAA-ATPase involved in multivesicular body (MVB) protein sorting, yeastyeast

Gene VPS4, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS4YPR173C VPH2P32341 215 aa6.24□□□□□ -1.41
VPS4YPR173C CBF2P32504 956 aa6.24□□□□□ -1.41
VPS4YPR173C UBP13P38187 747 aa6.24□□□□□ -1.41
VPS4YPR173C NCL1P38205 684 aaKnown RBP6.24□□□□□ -1.41
VPS4YPR173C POP4P38336 279 aa6.24□□□□□ -1.41
VPS4YPR173C BSD2P38356 321 aa6.24□□□□□ -1.41
VPS4YPR173C YMR134WP40207 237 aa6.24□□□□□ -1.41
VPS4YPR173C YTA12P40341 825 aa6.24□□□□□ -1.41
VPS4YPR173C LCB2P40970 561 aa6.24□□□□□ -1.41
VPS4YPR173C RPN11P43588 306 aaKnown RBP6.24□□□□□ -1.41
VPS4YPR173C COG6P53959 839 aa6.24□□□□□ -1.41
VPS4YPR173C OYE2Q03558 400 aaKnown RBP6.24□□□□□ -1.41
VPS4YPR173C ARO80Q04052 950 aa6.24□□□□□ -1.41
VPS4YPR173C PPM1Q04081 328 aa6.24□□□□□ -1.41
VPS4YPR173C YDR278CQ05612 105 aa6.24□□□□□ -1.41
VPS4YPR173C MEU1Q07938 337 aaKnown RBP RIP-Chip data6.24□□□□□ -1.41not detected
VPS4YPR173C OXR1Q08952 273 aa6.24□□□□□ -1.41
VPS4YPR173C RTP1Q12751 981 aa6.24□□□□□ -1.41
VPS4YPR173C CAF20P12962 161 aaKnown RBP6.23□□□□□ -1.41
VPS4YPR173C PMS1P14242 873 aa6.23□□□□□ -1.41
VPS4YPR173C ADE2P21264 571 aaKnown RBP6.23□□□□□ -1.41
VPS4YPR173C DIT1P21623 536 aa6.23□□□□□ -1.41
VPS4YPR173C SPS22P25380 463 aa6.23□□□□□ -1.41
VPS4YPR173C GPI10P30777 616 aa6.23□□□□□ -1.41
VPS4YPR173C MET4P32389 672 aa6.23□□□□□ -1.41
VPS4YPR173C NAB2P32505 525 aaKnown RBP RIP-Chip data6.23□□□□□ -1.41not detected
VPS4YPR173C YEL1P34225 687 aa6.23□□□□□ -1.41
VPS4YPR173C COY1P34237 679 aa6.23□□□□□ -1.41
VPS4YPR173C ECM4P36156 370 aa6.23□□□□□ -1.41
VPS4YPR173C SCS2P40075 244 aaKnown RBP6.23□□□□□ -1.41
VPS4YPR173C RGD2P43556 714 aa6.23□□□□□ -1.41
VPS4YPR173C MIG2P53035 382 aa6.23□□□□□ -1.41
VPS4YPR173C YGR111WP53265 400 aa6.23□□□□□ -1.41
VPS4YPR173C MSH6Q03834 1242 aa6.23□□□□□ -1.41
VPS4YPR173C HMO1Q03973 246 aaKnown RBP6.23□□□□□ -1.41
VPS4YPR173C RUP1Q12242 671 aa6.23□□□□□ -1.41
VPS4YPR173C RPL24AP04449 155 aaKnown RBP6.22□□□□□ -1.41
VPS4YPR173C CMD1P06787 147 aaKnown RBP6.22□□□□□ -1.41
VPS4YPR173C SRD1P09007 221 aa6.22□□□□□ -1.41
VPS4YPR173C NAT1P12945 854 aaKnown RBP6.22□□□□□ -1.41
VPS4YPR173C EXO70P19658 623 aa6.22□□□□□ -1.41
VPS4YPR173C URA4P20051 364 aa6.22□□□□□ -1.41
VPS4YPR173C MSB1P21339 1137 aaKnown RBP6.22□□□□□ -1.41
VPS4YPR173C RPC19P28000 142 aaKnown RBP6.22□□□□□ -1.41
VPS4YPR173C LHS1P36016 881 aa6.22□□□□□ -1.41
VPS4YPR173C IRS4P36115 615 aaKnown RBP6.22□□□□□ -1.41
VPS4YPR173C PGM2P37012 569 aaKnown RBP6.22□□□□□ -1.41
VPS4YPR173C APM2P38700 605 aa6.22□□□□□ -1.41
VPS4YPR173C PMC1P38929 1173 aaPredicted RBP6.22□□□□□ -1.41
VPS4YPR173C NPR2P39923 615 aa6.22□□□□□ -1.41
VPS4YPR173C ASG1P40467 964 aa6.22□□□□□ -1.41
VPS4YPR173C IAH1P41734 238 aa6.22□□□□□ -1.41
VPS4YPR173C LIA1P47120 325 aaKnown RBP6.22□□□□□ -1.41
VPS4YPR173C NOP15P53927 220 aaPredicted RBP6.22□□□□□ -1.41
VPS4YPR173C ORC4P54791 529 aa6.22□□□□□ -1.41
VPS4YPR173C DAK1P54838 584 aaKnown RBP6.22□□□□□ -1.41
VPS4YPR173C TIM8P57744 87 aa6.22□□□□□ -1.41
VPS4YPR173C CDC55Q00362 526 aa6.22□□□□□ -1.41
VPS4YPR173C FMN1Q03778 218 aa6.22□□□□□ -1.41
VPS4YPR173C DON1Q05610 365 aa6.22□□□□□ -1.41
VPS4YPR173C ATG17Q06410 417 aa6.22□□□□□ -1.41
VPS4YPR173C SLP1Q12232 587 aa6.22□□□□□ -1.41
VPS4YPR173C TAF3Q12297 353 aa6.22□□□□□ -1.41
VPS4YPR173C TRM11Q12463 433 aa6.22□□□□□ -1.41
VPS4YPR173C RKM4Q12504 494 aa6.22□□□□□ -1.41
VPS4YPR173C CCP1P00431 361 aa6.21□□□□□ -1.42
VPS4YPR173C ADE3P07245 946 aaKnown RBP6.21□□□□□ -1.42
VPS4YPR173C SAM2P19358 384 aaKnown RBP6.21□□□□□ -1.42
VPS4YPR173C KAR4P25583 335 aa6.21□□□□□ -1.42
VPS4YPR173C GAR1P28007 205 aaKnown RBP6.21□□□□□ -1.42
VPS4YPR173C EFT1P32324 842 aaKnown RBP6.21□□□□□ -1.42
VPS4YPR173C PGM1P33401 570 aaKnown RBP6.21□□□□□ -1.42
VPS4YPR173C OAF1P39720 1047 aaPredicted RBP6.21□□□□□ -1.42
VPS4YPR173C RPN3P40016 523 aaKnown RBP6.21□□□□□ -1.42
VPS4YPR173C ULP2P40537 1034 aaPredicted RBP6.21□□□□□ -1.42
VPS4YPR173C YIR007WP40566 764 aa6.21□□□□□ -1.42
VPS4YPR173C FMP33P46998 180 aa6.21□□□□□ -1.42
VPS4YPR173C USE1P53146 245 aa6.21□□□□□ -1.42
VPS4YPR173C LSC1P53598 329 aaKnown RBP6.21□□□□□ -1.42
VPS4YPR173C CNM67P53865 581 aaKnown RBP6.21□□□□□ -1.42
VPS4YPR173C CUZ1P53899 274 aa6.21□□□□□ -1.42
VPS4YPR173C ASI1P54074 624 aa6.21□□□□□ -1.42
VPS4YPR173C UBX4P54730 416 aa6.21□□□□□ -1.42
VPS4YPR173C RSC4Q02206 625 aa6.21□□□□□ -1.42
VPS4YPR173C YMR265CQ03508 461 aaKnown RBP6.21□□□□□ -1.42
VPS4YPR173C ACL4Q03771 387 aa6.21□□□□□ -1.42
VPS4YPR173C YDR222WQ04925 415 aa6.21□□□□□ -1.42
VPS4YPR173C SUE1Q06524 206 aa6.21□□□□□ -1.42
VPS4YPR173C ACK1Q07622 623 aaPredicted RBP6.21□□□□□ -1.42
VPS4YPR173C RIX7Q07844 837 aaKnown RBP6.21□□□□□ -1.42
VPS4YPR173C TIF6Q12522 245 aaKnown RBP6.21□□□□□ -1.42
VPS4YPR173C FLO11P08640 1367 aa6.2□□□□□ -1.42
VPS4YPR173C PMD1P32634 1753 aa6.2□□□□□ -1.42
VPS4YPR173C TUB3P09734 445 aaKnown RBP6.2□□□□□ -1.42
VPS4YPR173C TPS2P31688 896 aaKnown RBP6.2□□□□□ -1.42
VPS4YPR173C SEC6P32844 805 aa6.2□□□□□ -1.42
VPS4YPR173C RRP14P36080 434 aaKnown RBP6.2□□□□□ -1.42
VPS4YPR173C PFF1P38244 976 aa6.2□□□□□ -1.42
VPS4YPR173C STN1P38960 494 aa6.2□□□□□ -1.42
VPS4YPR173C PFK26P40433 827 aaKnown RBP6.2□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms