RNA–Protein interactions for RNA: YPL047W

SGF11, Transcript of Integral subunit of SAGA histone acetyltransferase complex, yeastyeast

Gene SGF11, Length 300 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGF11YPL047W YPT7P32939 208 aa1.95□□□□□ -2.1
SGF11YPL047W MAL31P38156 614 aa1.95□□□□□ -2.1
SGF11YPL047W PPE1P38796 400 aa1.95□□□□□ -2.1
SGF11YPL047W CCT4P39078 528 aaKnown RBP1.95□□□□□ -2.1
SGF11YPL047W NUG1P40010 520 aaKnown RBP1.95□□□□□ -2.1
SGF11YPL047W BFA1P47113 574 aa1.95□□□□□ -2.1
SGF11YPL047W YIP4P53093 235 aa1.95□□□□□ -2.1
SGF11YPL047W AIM14P53109 570 aa1.95□□□□□ -2.1
SGF11YPL047W NOP7P53261 605 aaKnown RBP1.95□□□□□ -2.1
SGF11YPL047W IDP3P53982 420 aaKnown RBP1.95□□□□□ -2.1
SGF11YPL047W MFM1Q02783 413 aa1.95□□□□□ -2.1
SGF11YPL047W RSC9Q03124 581 aa1.95□□□□□ -2.1
SGF11YPL047W CEF1Q03654 590 aaPredicted RBP1.95□□□□□ -2.1
SGF11YPL047W COG8Q04632 607 aa1.95□□□□□ -2.1
SGF11YPL047W ATG33Q06485 197 aa1.95□□□□□ -2.1
SGF11YPL047W YPL216WQ08964 1102 aa1.95□□□□□ -2.1
SGF11YPL047W GIN4Q12263 1142 aa1.95□□□□□ -2.1
SGF11YPL047W WHI2P12611 486 aa1.94□□□□□ -2.1
SGF11YPL047W NOP1P15646 327 aaKnown RBP1.94□□□□□ -2.1
SGF11YPL047W MEF1P25039 761 aa1.94□□□□□ -2.1
SGF11YPL047W IMG2P25642 146 aaPredicted RBP1.94□□□□□ -2.1
SGF11YPL047W GCS1P35197 352 aa1.94□□□□□ -2.1
SGF11YPL047W TMN3P40071 706 aa1.94□□□□□ -2.1
SGF11YPL047W COQ6P53318 479 aa1.94□□□□□ -2.1
SGF11YPL047W YMR210WQ03649 449 aa1.94□□□□□ -2.1
SGF11YPL047W NUP53Q03790 475 aa1.94□□□□□ -2.1
SGF11YPL047W GFD1Q04839 188 aaKnown RBP1.94□□□□□ -2.1
SGF11YPL047W DCS2Q12123 353 aa1.94□□□□□ -2.1
SGF11YPL047W YPR089WO13585 888 aa1.93□□□□□ -2.1
SGF11YPL047W HMG1P12683 1054 aa1.93□□□□□ -2.1
SGF11YPL047W YAP1P19880 650 aaKnown RBP1.93□□□□□ -2.1
SGF11YPL047W SSD1P24276 1250 aaKnown RBP RIP-Chip data1.93□□□□□ -2.1not detected
SGF11YPL047W CNE1P27825 502 aa1.93□□□□□ -2.1
SGF11YPL047W SRP40P32583 406 aaPredicted RBP1.93□□□□□ -2.1
SGF11YPL047W EXO1P39875 702 aa1.93□□□□□ -2.1
SGF11YPL047W PXA1P41909 870 aa1.93□□□□□ -2.1
SGF11YPL047W YNL018CP53976 612 aa1.93□□□□□ -2.1
SGF11YPL047W MRPL1Q04599 285 aa1.93□□□□□ -2.1
SGF11YPL047W CRC1Q12289 327 aa1.93□□□□□ -2.1
SGF11YPL047W PCL2P25693 308 aa1.92□□□□□ -2.1
SGF11YPL047W TIM23P32897 222 aa1.92□□□□□ -2.1
SGF11YPL047W PEX6P33760 1030 aa1.92□□□□□ -2.1
SGF11YPL047W PCM1P38628 557 aaKnown RBP1.92□□□□□ -2.1
SGF11YPL047W BEM4P39011 633 aa1.92□□□□□ -2.1
SGF11YPL047W MAF1P41910 395 aa1.92□□□□□ -2.1
SGF11YPL047W SPO1P53541 631 aa1.92□□□□□ -2.1
SGF11YPL047W BUD17P53727 317 aa1.92□□□□□ -2.1
SGF11YPL047W FDC1Q03034 503 aa1.92□□□□□ -2.1
SGF11YPL047W RCR2Q03446 210 aaKnown RBP1.92□□□□□ -2.1
SGF11YPL047W EFR3Q03653 782 aaKnown RBP1.92□□□□□ -2.1
SGF11YPL047W PPN1Q04119 674 aa1.92□□□□□ -2.1
SGF11YPL047W YLR407WQ06070 228 aa1.92□□□□□ -2.1
SGF11YPL047W BSP1Q06604 576 aa1.92□□□□□ -2.1
SGF11YPL047W TGS1Q12052 315 aa1.92□□□□□ -2.1
SGF11YPL047W HER1Q12276 1246 aa1.92□□□□□ -2.1
SGF11YPL047W SEC3P33332 1336 aaKnown RBP1.91□□□□□ -2.1
SGF11YPL047W SFL1P20134 766 aa1.91□□□□□ -2.1
SGF11YPL047W GSY2P27472 705 aa1.91□□□□□ -2.1
SGF11YPL047W MGM1P32266 881 aa1.91□□□□□ -2.1
SGF11YPL047W YKU70P32807 602 aa1.91□□□□□ -2.1
SGF11YPL047W LOT5P34234 306 aa1.91□□□□□ -2.1
SGF11YPL047W DHR2P36009 735 aaPredicted RBP1.91□□□□□ -2.1
SGF11YPL047W MRPL7P36519 292 aa1.91□□□□□ -2.1
SGF11YPL047W YAT2P40017 923 aa1.91□□□□□ -2.1
SGF11YPL047W OPT1P40897 799 aa1.91□□□□□ -2.1
SGF11YPL047W BST1P43571 1029 aa1.91□□□□□ -2.1
SGF11YPL047W YFL015CP43578 164 aa1.91□□□□□ -2.1
SGF11YPL047W NNF1P47149 201 aa1.91□□□□□ -2.1
SGF11YPL047W YGR054WP53235 642 aaKnown RBP1.91□□□□□ -2.1
SGF11YPL047W UGO1Q03327 502 aa1.91□□□□□ -2.1
SGF11YPL047W YLR125WQ12138 136 aa1.91□□□□□ -2.1
SGF11YPL047W RDL1Q12305 139 aaKnown RBP1.91□□□□□ -2.1
SGF11YPL047W YMR085WP0CF18 432 aa1.9□□□□□ -2.11
SGF11YPL047W IME1P21190 360 aa1.9□□□□□ -2.11
SGF11YPL047W YMR124WP39523 943 aaKnown RBP1.9□□□□□ -2.11
SGF11YPL047W YEL025CP39991 1188 aa1.9□□□□□ -2.11
SGF11YPL047W YIL092WP40497 633 aa1.9□□□□□ -2.11
SGF11YPL047W BUD8P41698 603 aa1.9□□□□□ -2.11
SGF11YPL047W YPS7Q06325 596 aa1.9□□□□□ -2.11
SGF11YPL047W TPO3Q06451 622 aa1.9□□□□□ -2.11
SGF11YPL047W BUD7Q08754 746 aa1.9□□□□□ -2.11
SGF11YPL047W YOR111WQ99210 232 aa1.9□□□□□ -2.11
SGF11YPL047W BI2P03873 423 aa1.89□□□□□ -2.11
SGF11YPL047W RNR3P21672 869 aaKnown RBP1.89□□□□□ -2.11
SGF11YPL047W MSH2P25847 964 aa1.89□□□□□ -2.11
SGF11YPL047W THI4P32318 326 aa1.89□□□□□ -2.11
SGF11YPL047W YKL091CP33324 310 aaKnown RBP1.89□□□□□ -2.11
SGF11YPL047W BRN1P38170 754 aa1.89□□□□□ -2.11
SGF11YPL047W CRG1P38892 291 aaRIP-Chip data1.89□□□□□ -2.11not detected
SGF11YPL047W NUP82P40368 713 aa1.89□□□□□ -2.11
SGF11YPL047W YIL024CP40543 189 aa1.89□□□□□ -2.11
SGF11YPL047W TIM50Q02776 476 aa1.89□□□□□ -2.11
SGF11YPL047W YPL071CQ02864 156 aa1.89□□□□□ -2.11
SGF11YPL047W WAR1Q03631 944 aa1.89□□□□□ -2.11
SGF11YPL047W GUD1Q07729 489 aa1.89□□□□□ -2.11
SGF11YPL047W YOL098CQ12496 1037 aa1.89□□□□□ -2.11
SGF11YPL047W YLR111WQ12528 110 aa1.89□□□□□ -2.11
SGF11YPL047W AIM44Q99299 758 aa1.89□□□□□ -2.11
SGF11YPL047W PHO8P11491 566 aa1.88□□□□□ -2.11
SGF11YPL047W CAP1P28495 268 aaKnown RBP1.88□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms