RNA–Protein interactions for RNA: YOR339C

UBC11, Transcript of Ubiquitin-conjugating enzyme, yeastyeast

Gene UBC11, Length 471 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC11YOR339C YIL054WP40524 105 aa6.11□□□□□ -1.43
UBC11YOR339C GUF1P46943 645 aa6.11□□□□□ -1.43
UBC11YOR339C VPS25P47142 202 aa6.11□□□□□ -1.43
UBC11YOR339C YNL034WP53963 612 aa6.11□□□□□ -1.43
UBC11YOR339C YNL018CP53976 612 aa6.11□□□□□ -1.43
UBC11YOR339C VPS60Q03390 229 aa6.11□□□□□ -1.43
UBC11YOR339C ECI1Q05871 280 aa6.11□□□□□ -1.43
UBC11YOR339C VPS5Q92331 675 aa6.11□□□□□ -1.43
UBC11YOR339C SPE1P08432 466 aa6.1□□□□□ -1.43
UBC11YOR339C PET111P08468 800 aa6.1□□□□□ -1.43
UBC11YOR339C SWC5P38326 303 aa6.1□□□□□ -1.43
UBC11YOR339C RIM4P38741 713 aa6.1□□□□□ -1.43
UBC11YOR339C NMD3P38861 518 aaKnown RBP6.1□□□□□ -1.43
UBC11YOR339C VTC4P47075 721 aa6.1□□□□□ -1.43
UBC11YOR339C YGR283CP53336 341 aaPredicted RBP6.1□□□□□ -1.43
UBC11YOR339C CEG1Q01159 459 aaPredicted RBP6.1□□□□□ -1.43
UBC11YOR339C MTD1Q02046 320 aaKnown RBP6.1□□□□□ -1.43
UBC11YOR339C YVH1Q02256 364 aaKnown RBP6.1□□□□□ -1.43
UBC11YOR339C HOS3Q02959 697 aaKnown RBP6.1□□□□□ -1.43
UBC11YOR339C HER2Q03557 464 aa6.1□□□□□ -1.43
UBC11YOR339C HRD3Q05787 833 aa6.1□□□□□ -1.43
UBC11YOR339C THI20Q08224 551 aa6.1□□□□□ -1.43
UBC11YOR339C APC5Q08683 685 aa6.1□□□□□ -1.43
UBC11YOR339C IOC2Q12072 812 aa6.1□□□□□ -1.43
UBC11YOR339C ZRT2Q12436 422 aa6.1□□□□□ -1.43
UBC11YOR339C DSS4P32601 143 aa6.09□□□□□ -1.43
UBC11YOR339C YEL043WP32618 956 aa6.09□□□□□ -1.43
UBC11YOR339C PTC3P34221 468 aaKnown RBP6.09□□□□□ -1.43
UBC11YOR339C TSA1P34760 196 aaKnown RBP6.09□□□□□ -1.43
UBC11YOR339C EAP1P36041 632 aaKnown RBP6.09□□□□□ -1.43
UBC11YOR339C LYS9P38999 446 aa6.09□□□□□ -1.43
UBC11YOR339C END3P39013 349 aa6.09□□□□□ -1.43
UBC11YOR339C SAP185P40856 1058 aa6.09□□□□□ -1.43
UBC11YOR339C CEP3P40969 608 aa6.09□□□□□ -1.43
UBC11YOR339C RPC17P47076 161 aa6.09□□□□□ -1.43
UBC11YOR339C MAL13P53338 473 aa6.09□□□□□ -1.43
UBC11YOR339C YNL040WP53960 456 aaPredicted RBP6.09□□□□□ -1.43
UBC11YOR339C CDC55Q00362 526 aa6.09□□□□□ -1.43
UBC11YOR339C INA17Q02888 182 aa6.09□□□□□ -1.43
UBC11YOR339C GCN5Q03330 439 aa6.09□□□□□ -1.43
UBC11YOR339C RKM2Q03942 479 aa6.09□□□□□ -1.43
UBC11YOR339C URH1Q04179 340 aa6.09□□□□□ -1.43
UBC11YOR339C RRB1Q04225 511 aaKnown RBP6.09□□□□□ -1.43
UBC11YOR339C ECM22Q05958 814 aaPredicted RBP6.09□□□□□ -1.43
UBC11YOR339C AIM41Q12032 185 aa6.09□□□□□ -1.43
UBC11YOR339C YDR034W-BQ6Q5X2 51 aa6.09□□□□□ -1.43
UBC11YOR339C PAB1P04147 577 aaKnown RBP RIP-Chip data6.08□□□□□ -1.44not detected
UBC11YOR339C RAD10P06838 210 aa6.08□□□□□ -1.44
UBC11YOR339C PDR1P12383 1068 aa6.08□□□□□ -1.44
UBC11YOR339C YPK1P12688 680 aaKnown RBP6.08□□□□□ -1.44
UBC11YOR339C PMS1P14242 873 aa6.08□□□□□ -1.44
UBC11YOR339C RGR1P19263 1082 aa6.08□□□□□ -1.44
UBC11YOR339C MEI4P29467 408 aa6.08□□□□□ -1.44
UBC11YOR339C SYN8P31377 255 aa6.08□□□□□ -1.44
UBC11YOR339C DAL1P32375 460 aa6.08□□□□□ -1.44
UBC11YOR339C BYE1P36106 594 aa6.08□□□□□ -1.44
UBC11YOR339C YKR051WP36142 418 aa6.08□□□□□ -1.44
UBC11YOR339C YBR225WP38321 900 aa6.08□□□□□ -1.44
UBC11YOR339C TMA108P40462 946 aa6.08□□□□□ -1.44
UBC11YOR339C MAD1P40957 749 aa6.08□□□□□ -1.44
UBC11YOR339C RIM8P53179 542 aa6.08□□□□□ -1.44
UBC11YOR339C UTP8P53276 713 aaKnown RBP6.08□□□□□ -1.44
UBC11YOR339C YNL144CP53907 740 aa6.08□□□□□ -1.44
UBC11YOR339C YNL108CP53929 270 aa6.08□□□□□ -1.44
UBC11YOR339C BET4Q00618 327 aa6.08□□□□□ -1.44
UBC11YOR339C YMR187CQ03236 431 aa6.08□□□□□ -1.44
UBC11YOR339C SPG3Q04398 127 aaPredicted RBP6.08□□□□□ -1.44
UBC11YOR339C TDA9Q04545 1251 aa6.08□□□□□ -1.44
UBC11YOR339C KAP95Q06142 861 aaKnown RBP6.08□□□□□ -1.44
UBC11YOR339C PIG1Q06216 648 aa6.08□□□□□ -1.44
UBC11YOR339C FMP25Q08023 583 aa6.08□□□□□ -1.44
UBC11YOR339C CIR2Q08822 631 aa6.08□□□□□ -1.44
UBC11YOR339C THI21Q08975 551 aa6.08□□□□□ -1.44
UBC11YOR339C ARP7Q12406 477 aa6.08□□□□□ -1.44
UBC11YOR339C NOP14Q99207 810 aaKnown RBP6.08□□□□□ -1.44
UBC11YOR339C CCP1P00431 361 aa6.07□□□□□ -1.44
UBC11YOR339C TUB3P09734 445 aaKnown RBP6.07□□□□□ -1.44
UBC11YOR339C SFL1P20134 766 aa6.07□□□□□ -1.44
UBC11YOR339C GCG1P32656 232 aaKnown RBP6.07□□□□□ -1.44
UBC11YOR339C DCW1P36091 449 aa6.07□□□□□ -1.44
UBC11YOR339C PCA1P38360 1216 aa6.07□□□□□ -1.44
UBC11YOR339C CCT4P39078 528 aaKnown RBP6.07□□□□□ -1.44
UBC11YOR339C ERP2P39704 215 aa6.07□□□□□ -1.44
UBC11YOR339C MKT1P40850 830 aaKnown RBP6.07□□□□□ -1.44
UBC11YOR339C ALY2P47029 1046 aa6.07□□□□□ -1.44
UBC11YOR339C YJL045WP47052 634 aa6.07□□□□□ -1.44
UBC11YOR339C BFA1P47113 574 aa6.07□□□□□ -1.44
UBC11YOR339C YML6P51998 286 aa6.07□□□□□ -1.44
UBC11YOR339C KTR6P54070 446 aa6.07□□□□□ -1.44
UBC11YOR339C MTG1Q03151 367 aaPredicted RBP6.07□□□□□ -1.44
UBC11YOR339C VTI1Q04338 217 aa6.07□□□□□ -1.44
UBC11YOR339C AIM32Q04689 311 aa6.07□□□□□ -1.44
UBC11YOR339C THI7Q05998 598 aa6.07□□□□□ -1.44
UBC11YOR339C ATG23Q06671 453 aa6.07□□□□□ -1.44
UBC11YOR339C NDJ1Q12366 352 aa6.07□□□□□ -1.44
UBC11YOR339C SFI1Q12369 946 aa6.07□□□□□ -1.44
UBC11YOR339C RMP1Q12530 201 aa6.07□□□□□ -1.44
UBC11YOR339C PUF4P25339 888 aaKnown RBP RIP-Chip data6.06□□□□□ -1.44not detected
UBC11YOR339C YCR015CP25616 317 aa6.06□□□□□ -1.44
UBC11YOR339C YIH1P25637 258 aa6.06□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms