RNA–Protein interactions for RNA: YOR018W

ROD1, Transcript of Alpha-arrestin involved in ubiquitin-dependent endocytosis, yeastyeast

Gene ROD1, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROD1YOR018W WTM2Q12206 467 aa4.05□□□□□ -1.76
ROD1YOR018W LAA1P39526 2014 aa4.05□□□□□ -1.76
ROD1YOR018W ADK2P26364 225 aa4.05□□□□□ -1.76
ROD1YOR018W CAP1P28495 268 aaKnown RBP4.05□□□□□ -1.76
ROD1YOR018W TRM2P33753 639 aa4.05□□□□□ -1.76
ROD1YOR018W OCA5P38738 679 aa4.05□□□□□ -1.76
ROD1YOR018W YER189WP40104 122 aa4.05□□□□□ -1.76
ROD1YOR018W YGL036WP53185 909 aaPredicted RBP4.05□□□□□ -1.76
ROD1YOR018W SPC98P53540 846 aa4.05□□□□□ -1.76
ROD1YOR018W YNL011CP53980 444 aa4.05□□□□□ -1.76
ROD1YOR018W BET4Q00618 327 aa4.05□□□□□ -1.76
ROD1YOR018W STP1Q00947 519 aa4.05□□□□□ -1.76
ROD1YOR018W YPL034WQ03083 165 aa4.05□□□□□ -1.76
ROD1YOR018W RCR2Q03446 210 aaKnown RBP4.05□□□□□ -1.76
ROD1YOR018W EMI2Q04409 500 aaKnown RBP4.05□□□□□ -1.76
ROD1YOR018W PKH2Q12236 1081 aaKnown RBP4.05□□□□□ -1.76
ROD1YOR018W IRA1P18963 3092 aa4.05□□□□□ -1.76
ROD1YOR018W YLR462WO13556 202 aa4.04□□□□□ -1.76
ROD1YOR018W PUF4P25339 888 aaKnown RBP RIP-Chip data4.04□□□□□ -1.76 RIP-Chip
ROD1YOR018W RFS1P38234 210 aaKnown RBP4.04□□□□□ -1.76
ROD1YOR018W YHL049CP38722 271 aa4.04□□□□□ -1.76
ROD1YOR018W HXT8P40886 569 aa4.04□□□□□ -1.76
ROD1YOR018W MAF1P41910 395 aa4.04□□□□□ -1.76
ROD1YOR018W YNL320WP42840 284 aa4.04□□□□□ -1.76
ROD1YOR018W YFL064CP43540 174 aa4.04□□□□□ -1.76
ROD1YOR018W POL31P46957 487 aa4.04□□□□□ -1.76
ROD1YOR018W SMC3P47037 1230 aa4.04□□□□□ -1.76
ROD1YOR018W YGR111WP53265 400 aa4.04□□□□□ -1.76
ROD1YOR018W CWC22P53333 577 aaKnown RBP4.04□□□□□ -1.76
ROD1YOR018W SGT2Q12118 346 aaKnown RBP4.04□□□□□ -1.76
ROD1YOR018W RMP1Q12530 201 aa4.04□□□□□ -1.76
ROD1YOR018W YBL111CQ3E7Y5 667 aa4.04□□□□□ -1.76
ROD1YOR018W HSF1P10961 833 aa4.04□□□□□ -1.76
ROD1YOR018W COX11P19516 300 aaKnown RBP4.04□□□□□ -1.76
ROD1YOR018W CKI1P20485 582 aa4.04□□□□□ -1.76
ROD1YOR018W AFT1P22149 690 aa4.04□□□□□ -1.76
ROD1YOR018W SPC110P32380 944 aa4.04□□□□□ -1.76
ROD1YOR018W SRB4P32569 687 aa4.04□□□□□ -1.76
ROD1YOR018W FRE1P32791 686 aa4.04□□□□□ -1.76
ROD1YOR018W AIM26P32858 118 aa4.04□□□□□ -1.76
ROD1YOR018W MRP4P32902 394 aa4.04□□□□□ -1.76
ROD1YOR018W BCK2P33306 851 aa4.04□□□□□ -1.76
ROD1YOR018W VRP1P37370 817 aa4.04□□□□□ -1.76
ROD1YOR018W YNL144CP53907 740 aa4.04□□□□□ -1.76
ROD1YOR018W UFO1Q04511 668 aa4.04□□□□□ -1.76
ROD1YOR018W OPY2Q06810 360 aa4.04□□□□□ -1.76
ROD1YOR018W DIS3Q08162 1001 aaKnown RBP4.04□□□□□ -1.76
ROD1YOR018W PUS1Q12211 544 aaKnown RBP4.04□□□□□ -1.76
ROD1YOR018W SPO21Q12411 609 aa4.04□□□□□ -1.76
ROD1YOR018W IRA2P19158 3079 aa4.04□□□□□ -1.76
ROD1YOR018W TPK1P06244 397 aa4.03□□□□□ -1.76
ROD1YOR018W PRP9P19736 530 aaKnown RBP4.03□□□□□ -1.76
ROD1YOR018W MRPL33P20084 86 aa4.03□□□□□ -1.76
ROD1YOR018W LRE1P25579 583 aaKnown RBP4.03□□□□□ -1.76
ROD1YOR018W BUD2P33314 1104 aa4.03□□□□□ -1.76
ROD1YOR018W MKS1P34072 584 aa4.03□□□□□ -1.76
ROD1YOR018W YBP1P38315 674 aa4.03□□□□□ -1.76
ROD1YOR018W SLX1P38324 304 aa4.03□□□□□ -1.76
ROD1YOR018W YHR054CP38780 354 aa4.03□□□□□ -1.76
ROD1YOR018W FAF1P40546 346 aaPredicted RBP4.03□□□□□ -1.76
ROD1YOR018W YIR016WP40572 265 aa4.03□□□□□ -1.76
ROD1YOR018W FOL2P51601 243 aaKnown RBP4.03□□□□□ -1.76
ROD1YOR018W YMR018WQ04364 514 aa4.03□□□□□ -1.76
ROD1YOR018W ATG23Q06671 453 aa4.03□□□□□ -1.76
ROD1YOR018W ECM30Q06673 1274 aa4.03□□□□□ -1.76
ROD1YOR018W DNL4Q08387 944 aaPredicted RBP4.03□□□□□ -1.76
ROD1YOR018W MET32Q12041 191 aa4.03□□□□□ -1.76
ROD1YOR018W RPS31P05759 152 aaKnown RBP4.03□□□□□ -1.76
ROD1YOR018W SNF1P06782 633 aaKnown RBP4.03□□□□□ -1.76
ROD1YOR018W MCM1P11746 286 aa4.03□□□□□ -1.76
ROD1YOR018W TRX1P22217 103 aaKnown RBP4.03□□□□□ -1.76
ROD1YOR018W PEX1P24004 1043 aa4.03□□□□□ -1.76
ROD1YOR018W FUB1P25659 250 aa4.03□□□□□ -1.76
ROD1YOR018W ECM32P32644 1121 aaKnown RBP4.03□□□□□ -1.76
ROD1YOR018W BLI1P35727 113 aa4.03□□□□□ -1.76
ROD1YOR018W CCL1P37366 393 aa4.03□□□□□ -1.76
ROD1YOR018W APN2P38207 520 aa4.03□□□□□ -1.76
ROD1YOR018W BUD16P39988 312 aa4.03□□□□□ -1.76
ROD1YOR018W KHA1P40309 873 aa4.03□□□□□ -1.76
ROD1YOR018W ESL1P40456 1118 aa4.03□□□□□ -1.76
ROD1YOR018W OPT1P40897 799 aa4.03□□□□□ -1.76
ROD1YOR018W CEP3P40969 608 aa4.03□□□□□ -1.76
ROD1YOR018W MIC19P43594 170 aa4.03□□□□□ -1.76
ROD1YOR018W SUM1P46676 1062 aa4.03□□□□□ -1.76
ROD1YOR018W MZM1Q03429 123 aaPredicted RBP4.03□□□□□ -1.76
ROD1YOR018W POB3Q04636 552 aaKnown RBP4.03□□□□□ -1.76
ROD1YOR018W DFG5Q05031 458 aa4.03□□□□□ -1.76
ROD1YOR018W RCL1Q08096 367 aaPredicted RBP4.03□□□□□ -1.76
ROD1YOR018W TRE1Q08919 783 aa4.03□□□□□ -1.76
ROD1YOR018W DDC1Q08949 612 aa4.03□□□□□ -1.76
ROD1YOR018W ZRT2Q12436 422 aa4.03□□□□□ -1.76
ROD1YOR018W GAC1P28006 793 aa4.02□□□□□ -1.77
ROD1YOR018W DBF4P32325 704 aa4.02□□□□□ -1.77
ROD1YOR018W SEG2P34250 1132 aa4.02□□□□□ -1.77
ROD1YOR018W MRPL7P36519 292 aa4.02□□□□□ -1.77
ROD1YOR018W END3P39013 349 aa4.02□□□□□ -1.77
ROD1YOR018W FIR1P40020 876 aa4.02□□□□□ -1.77
ROD1YOR018W DSE1P40077 573 aa4.02□□□□□ -1.77
ROD1YOR018W PRK1P40494 810 aa4.02□□□□□ -1.77
ROD1YOR018W VPS60Q03390 229 aa4.02□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms