RNA–Protein interactions for RNA: YNL317W

PFS2, Transcript of Integral subunit of the pre-mRNA CPF complex, yeastyeast

Gene PFS2, Length 1,398 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PFS2YNL317W SEN54Q02825 467 aaPredicted RBP8.04□□□□□ -1.12
PFS2YNL317W ADI1Q03677 179 aa8.04□□□□□ -1.12
PFS2YNL317W SEC10Q06245 871 aa8.04□□□□□ -1.12
PFS2YNL317W RRD2Q12461 358 aa8.04□□□□□ -1.12
PFS2YNL317W RRP36Q12481 300 aaPredicted RBP8.04□□□□□ -1.12
PFS2YNL317W VCX1Q99385 411 aa8.04□□□□□ -1.12
PFS2YNL317W TUB1P09733 447 aaKnown RBP8.03□□□□□ -1.12
PFS2YNL317W SSC1P0CS90 654 aaKnown RBP8.03□□□□□ -1.12
PFS2YNL317W GDA1P32621 518 aa8.03□□□□□ -1.12
PFS2YNL317W YBR138CP38277 524 aa8.03□□□□□ -1.12
PFS2YNL317W AST2P39945 430 aaKnown RBP8.03□□□□□ -1.12
PFS2YNL317W FIG4P42837 879 aa8.03□□□□□ -1.12
PFS2YNL317W IRC5P43610 853 aa8.03□□□□□ -1.12
PFS2YNL317W TRF5P48561 642 aaKnown RBP8.03□□□□□ -1.12
PFS2YNL317W NUT1P53114 1132 aa8.03□□□□□ -1.12
PFS2YNL317W MRM2P53123 320 aa8.03□□□□□ -1.12
PFS2YNL317W UBP3Q01477 912 aaKnown RBP RIP-Chip data8.03□□□□□ -1.12not detected
PFS2YNL317W KIN4Q01919 800 aa8.03□□□□□ -1.12
PFS2YNL317W GYP1Q08484 637 aa8.03□□□□□ -1.12
PFS2YNL317W NTO1Q12311 748 aa8.03□□□□□ -1.12
PFS2YNL317W EMP46Q12396 444 aa8.03□□□□□ -1.12
PFS2YNL317W SFL1P20134 766 aa8.02□□□□□ -1.13
PFS2YNL317W URE2P23202 354 aaKnown RBP8.02□□□□□ -1.13
PFS2YNL317W HSP30P25619 332 aa8.02□□□□□ -1.13
PFS2YNL317W ZIP1P31111 875 aa8.02□□□□□ -1.13
PFS2YNL317W NTR2P36118 322 aaPredicted RBP8.02□□□□□ -1.13
PFS2YNL317W GIP1P38229 639 aa8.02□□□□□ -1.13
PFS2YNL317W PFF1P38244 976 aa8.02□□□□□ -1.13
PFS2YNL317W YBR242WP38331 238 aa8.02□□□□□ -1.13
PFS2YNL317W SMF2P38778 549 aa8.02□□□□□ -1.13
PFS2YNL317W APE4P38821 490 aa8.02□□□□□ -1.13
PFS2YNL317W UTP9P38882 575 aaKnown RBP8.02□□□□□ -1.13
PFS2YNL317W SBE2P42223 864 aaKnown RBP8.02□□□□□ -1.13
PFS2YNL317W SAD1P43589 448 aa8.02□□□□□ -1.13
PFS2YNL317W DAN4P47179 1161 aa8.02□□□□□ -1.13
PFS2YNL317W NUP84P52891 726 aa8.02□□□□□ -1.13
PFS2YNL317W COG2P53271 262 aa8.02□□□□□ -1.13
PFS2YNL317W YMR111CQ04461 462 aaPredicted RBP8.02□□□□□ -1.13
PFS2YNL317W COQ9Q05779 260 aa8.02□□□□□ -1.13
PFS2YNL317W UTP4Q06679 776 aaKnown RBP8.02□□□□□ -1.13
PFS2YNL317W DNL4Q08387 944 aaPredicted RBP8.02□□□□□ -1.13
PFS2YNL317W MCH5Q08777 521 aa8.02□□□□□ -1.13
PFS2YNL317W NHA1Q99271 985 aa8.02□□□□□ -1.13
PFS2YNL317W ILS1P09436 1072 aaKnown RBP8.01□□□□□ -1.13
PFS2YNL317W PMS1P14242 873 aa8.01□□□□□ -1.13
PFS2YNL317W HSC82P15108 705 aaKnown RBP8.01□□□□□ -1.13
PFS2YNL317W MGT1P26188 188 aa8.01□□□□□ -1.13
PFS2YNL317W MGM1P32266 881 aa8.01□□□□□ -1.13
PFS2YNL317W RAD54P32863 898 aa8.01□□□□□ -1.13
PFS2YNL317W PTK1P36002 662 aaPredicted RBP8.01□□□□□ -1.13
PFS2YNL317W DUG2P38149 878 aa8.01□□□□□ -1.13
PFS2YNL317W GOS1P38736 223 aa8.01□□□□□ -1.13
PFS2YNL317W NAB3P38996 802 aaKnown RBP RIP-Chip data8.01□□□□□ -1.13not detected
PFS2YNL317W DLD3P39976 496 aaKnown RBP8.01□□□□□ -1.13
PFS2YNL317W FTR1P40088 404 aa8.01□□□□□ -1.13
PFS2YNL317W UBP7P40453 1071 aa8.01□□□□□ -1.13
PFS2YNL317W YGR266WP53326 701 aa8.01□□□□□ -1.13
PFS2YNL317W SED5Q01590 340 aa8.01□□□□□ -1.13
PFS2YNL317W YMR226CQ05016 267 aaKnown RBP8.01□□□□□ -1.13
PFS2YNL317W FUS2Q05670 677 aa8.01□□□□□ -1.13
PFS2YNL317W COA4Q05809 96 aa8.01□□□□□ -1.13
PFS2YNL317W SGO1Q08490 590 aa8.01□□□□□ -1.13
PFS2YNL317W TRE1Q08919 783 aa8.01□□□□□ -1.13
PFS2YNL317W YPL260WQ08977 551 aa8.01□□□□□ -1.13
PFS2YNL317W GPM3Q12326 303 aa8.01□□□□□ -1.13
PFS2YNL317W HRT3Q12347 344 aa8.01□□□□□ -1.13
PFS2YNL317W FLO11P08640 1367 aa8.01□□□□□ -1.13
PFS2YNL317W ATP2P00830 511 aaKnown RBP8□□□□□ -1.13
PFS2YNL317W COR1P07256 457 aa8□□□□□ -1.13
PFS2YNL317W PFK1P16861 987 aaKnown RBP8□□□□□ -1.13
PFS2YNL317W PRP6P19735 899 aaPredicted RBP8□□□□□ -1.13
PFS2YNL317W RET1P22276 1149 aaKnown RBP8□□□□□ -1.13
PFS2YNL317W CAD1P24813 409 aaKnown RBP8□□□□□ -1.13
PFS2YNL317W YJU2P28320 278 aaPredicted RBP8□□□□□ -1.13
PFS2YNL317W MUM2P38236 366 aa8□□□□□ -1.13
PFS2YNL317W ORC6P38826 435 aa8□□□□□ -1.13
PFS2YNL317W YHB1P39676 399 aaKnown RBP8□□□□□ -1.13
PFS2YNL317W PSP1P50896 841 aaKnown RBP8□□□□□ -1.13
PFS2YNL317W YGR111WP53265 400 aa8□□□□□ -1.13
PFS2YNL317W BIO4P53630 237 aa8□□□□□ -1.13
PFS2YNL317W CLU1Q03690 1277 aaKnown RBP8□□□□□ -1.13
PFS2YNL317W BUL2Q03758 920 aaKnown RBP8□□□□□ -1.13
PFS2YNL317W SPC2Q04969 178 aa8□□□□□ -1.13
PFS2YNL317W YDL057WQ07379 328 aa8□□□□□ -1.13
PFS2YNL317W YPL277CQ08989 487 aa8□□□□□ -1.13
PFS2YNL317W FAP7Q12055 197 aaPredicted RBP8□□□□□ -1.13
PFS2YNL317W PMD1P32634 1753 aa8□□□□□ -1.13
PFS2YNL317W MF(ALPHA)1P01149 165 aa7.99□□□□□ -1.13
PFS2YNL317W RPL6BP05739 176 aaKnown RBP7.99□□□□□ -1.13
PFS2YNL317W SEC2P17065 759 aa7.99□□□□□ -1.13
PFS2YNL317W SAN1P22470 610 aa7.99□□□□□ -1.13
PFS2YNL317W VPS34P22543 875 aa7.99□□□□□ -1.13
PFS2YNL317W TFB1P32776 642 aa7.99□□□□□ -1.13
PFS2YNL317W RRN6P32786 894 aa7.99□□□□□ -1.13
PFS2YNL317W AFG2P32794 780 aa7.99□□□□□ -1.13
PFS2YNL317W VPS21P36017 210 aaKnown RBP7.99□□□□□ -1.13
PFS2YNL317W ETR1P38071 380 aa7.99□□□□□ -1.13
PFS2YNL317W KAP104P38217 918 aaKnown RBP7.99□□□□□ -1.13
PFS2YNL317W MPT5P39016 859 aaKnown RBP RIP-Chip data7.99□□□□□ -1.13not detected
PFS2YNL317W AVT6P40074 448 aa7.99□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 99.7 ms