RNA–Protein interactions for RNA: YNL287W

SEC21, Transcript of Gamma subunit of coatomer, yeastyeast

Gene SEC21, Length 2,808 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC21YNL287W MDM10P18409 493 aa1.5□□□□□ -2.17
SEC21YNL287W EMP70P32802 667 aa1.5□□□□□ -2.17
SEC21YNL287W EFM2P38347 419 aa1.5□□□□□ -2.17
SEC21YNL287W LRP1P38801 184 aaKnown RBP1.5□□□□□ -2.17
SEC21YNL287W POP2P39008 433 aa1.5□□□□□ -2.17
SEC21YNL287W RAD26P40352 1085 aa1.5□□□□□ -2.17
SEC21YNL287W MNT3P40549 630 aa1.5□□□□□ -2.17
SEC21YNL287W HUL4P40985 892 aa1.5□□□□□ -2.17
SEC21YNL287W RET2P43621 546 aa1.5□□□□□ -2.17
SEC21YNL287W YJL055WP47044 245 aa1.5□□□□□ -2.17
SEC21YNL287W YGR153WP48238 217 aa1.5□□□□□ -2.17
SEC21YNL287W UBC11P52492 156 aa1.5□□□□□ -2.17
SEC21YNL287W TEL2P53038 688 aa1.5□□□□□ -2.17
SEC21YNL287W UTP8P53276 713 aaKnown RBP1.5□□□□□ -2.17
SEC21YNL287W COG6P53959 839 aa1.5□□□□□ -2.17
SEC21YNL287W PNG1Q02890 363 aa1.5□□□□□ -2.17
SEC21YNL287W FDC1Q03034 503 aa1.5□□□□□ -2.17
SEC21YNL287W YML131WQ03102 365 aa1.5□□□□□ -2.17
SEC21YNL287W CWC21Q03375 135 aaKnown RBP1.5□□□□□ -2.17
SEC21YNL287W ATG38Q05789 226 aaKnown RBP1.5□□□□□ -2.17
SEC21YNL287W YDR056CQ12025 205 aa1.5□□□□□ -2.17
SEC21YNL287W NYV1Q12255 253 aa1.5□□□□□ -2.17
SEC21YNL287W YOR131CQ12486 218 aa1.5□□□□□ -2.17
SEC21YNL287W YBL111CQ3E7Y5 667 aa1.5□□□□□ -2.17
SEC21YNL287W MPD2Q99316 277 aa1.5□□□□□ -2.17
SEC21YNL287W SST2P11972 698 aaKnown RBP1.5□□□□□ -2.17
SEC21YNL287W SPO16P17122 198 aa1.5□□□□□ -2.17
SEC21YNL287W RPB4P20433 221 aaPredicted RBP1.5□□□□□ -2.17
SEC21YNL287W HCA4P20448 770 aaKnown RBP1.5□□□□□ -2.17
SEC21YNL287W CDC60P26637 1090 aaKnown RBP1.5□□□□□ -2.17
SEC21YNL287W AAR2P32357 355 aaPredicted RBP1.5□□□□□ -2.17
SEC21YNL287W TMT1P32643 299 aa1.5□□□□□ -2.17
SEC21YNL287W COY1P34237 679 aa1.5□□□□□ -2.17
SEC21YNL287W PET10P36139 283 aa1.5□□□□□ -2.17
SEC21YNL287W BCD1P38772 366 aa1.5□□□□□ -2.17
SEC21YNL287W PCL5P38794 229 aa1.5□□□□□ -2.17
SEC21YNL287W PEX18P38855 283 aa1.5□□□□□ -2.17
SEC21YNL287W STN1P38960 494 aa1.5□□□□□ -2.17
SEC21YNL287W UTP18P40362 594 aaPredicted RBP1.5□□□□□ -2.17
SEC21YNL287W PFA3P42836 336 aa1.5□□□□□ -2.17
SEC21YNL287W SET2P46995 733 aaKnown RBP1.5□□□□□ -2.17
SEC21YNL287W SGM1P47166 707 aa1.5□□□□□ -2.17
SEC21YNL287W PIP2P52960 996 aa1.5□□□□□ -2.17
SEC21YNL287W SPO1P53541 631 aa1.5□□□□□ -2.17
SEC21YNL287W YNL050CP53952 270 aa1.5□□□□□ -2.17
SEC21YNL287W YNL034WP53963 612 aa1.5□□□□□ -2.17
SEC21YNL287W YNL018CP53976 612 aa1.5□□□□□ -2.17
SEC21YNL287W SPC19Q03954 165 aa1.5□□□□□ -2.17
SEC21YNL287W COG8Q04632 607 aa1.5□□□□□ -2.17
SEC21YNL287W ARP9Q05123 467 aa1.5□□□□□ -2.17
SEC21YNL287W TSR2Q06672 205 aaKnown RBP1.5□□□□□ -2.17
SEC21YNL287W YOR389WQ08912 624 aa1.5□□□□□ -2.17
SEC21YNL287W BRR1Q99177 341 aaPredicted RBP1.5□□□□□ -2.17
SEC21YNL287W ADR1P07248 1323 aa1.49□□□□□ -2.17
SEC21YNL287W RPB2P08518 1224 aaKnown RBP1.49□□□□□ -2.17
SEC21YNL287W HMG1P12683 1054 aa1.49□□□□□ -2.17
SEC21YNL287W PMS1P14242 873 aa1.49□□□□□ -2.17
SEC21YNL287W APA1P16550 321 aaKnown RBP1.49□□□□□ -2.17
SEC21YNL287W PRP9P19736 530 aaKnown RBP1.49□□□□□ -2.17
SEC21YNL287W GFD2P25370 566 aaKnown RBP1.49□□□□□ -2.17
SEC21YNL287W GRX1P25373 110 aaKnown RBP1.49□□□□□ -2.17
SEC21YNL287W MCM10P32354 571 aa1.49□□□□□ -2.17
SEC21YNL287W SCT1P32784 759 aa1.49□□□□□ -2.17
SEC21YNL287W PEX2P32800 271 aa1.49□□□□□ -2.17
SEC21YNL287W RIB7P33312 244 aa1.49□□□□□ -2.17
SEC21YNL287W PPZ2P33329 710 aa1.49□□□□□ -2.17
SEC21YNL287W MIC60P36112 540 aa1.49□□□□□ -2.17
SEC21YNL287W CTM1P38818 585 aa1.49□□□□□ -2.17
SEC21YNL287W ECM1P39715 212 aa1.49□□□□□ -2.17
SEC21YNL287W MAD1P40957 749 aa1.49□□□□□ -2.17
SEC21YNL287W AGX1P43567 385 aa1.49□□□□□ -2.17
SEC21YNL287W MDE1P47095 244 aa1.49□□□□□ -2.17
SEC21YNL287W GPG1P53130 126 aa1.49□□□□□ -2.17
SEC21YNL287W NCS2P53923 493 aaPredicted RBP1.49□□□□□ -2.17
SEC21YNL287W SEC5P89102 971 aa1.49□□□□□ -2.17
SEC21YNL287W ARR2Q06597 130 aa1.49□□□□□ -2.17
SEC21YNL287W FMP25Q08023 583 aa1.49□□□□□ -2.17
SEC21YNL287W SSP2Q08646 371 aa1.49□□□□□ -2.17
SEC21YNL287W MRN1Q08925 612 aaKnown RBP RIP-Chip data1.49□□□□□ -2.17not detected
SEC21YNL287W AFT2Q08957 416 aa1.49□□□□□ -2.17
SEC21YNL287W TGL5Q12043 749 aa1.49□□□□□ -2.17
SEC21YNL287W LSP1Q12230 341 aaKnown RBP1.49□□□□□ -2.17
SEC21YNL287W HAP1P0CE41 1502 aa1.49□□□□□ -2.17
SEC21YNL287W YMR084WA2P2R3 262 aa1.49□□□□□ -2.17
SEC21YNL287W ERR1P0CX10 437 aa1.49□□□□□ -2.17
SEC21YNL287W ERR2P0CX11 437 aa1.49□□□□□ -2.17
SEC21YNL287W RFA1P22336 621 aaKnown RBP1.49□□□□□ -2.17
SEC21YNL287W EFB1P32471 206 aaKnown RBP1.49□□□□□ -2.17
SEC21YNL287W PXA2P34230 853 aa1.49□□□□□ -2.17
SEC21YNL287W TEF4P36008 412 aaKnown RBP1.49□□□□□ -2.17
SEC21YNL287W TRZ1P36159 838 aaPredicted RBP1.49□□□□□ -2.17
SEC21YNL287W UBP13P38187 747 aa1.49□□□□□ -2.17
SEC21YNL287W YLF2P38746 405 aa1.49□□□□□ -2.17
SEC21YNL287W VPS8P39702 1274 aa1.49□□□□□ -2.17
SEC21YNL287W CHZ1P40019 153 aaPredicted RBP1.49□□□□□ -2.17
SEC21YNL287W TMA108P40462 946 aa1.49□□□□□ -2.17
SEC21YNL287W CEP3P40969 608 aa1.49□□□□□ -2.17
SEC21YNL287W PXA1P41909 870 aa1.49□□□□□ -2.17
SEC21YNL287W GPD2P41911 440 aaKnown RBP1.49□□□□□ -2.17
SEC21YNL287W HXT16P47185 567 aa1.49□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 83.1 ms