RNA–Protein interactions for RNA: YNL242W

ATG2, Transcript of Peripheral membrane protein required for autophagic vesicle formation, yeast

Gene ATG2, Length 4,779 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG2	YNL242W	RPT5	P33297	434 aa	Known RBP	4.13	□□□□□ -1.75
ATG2	YNL242W	PTK1	P36002	662 aa	Predicted RBP	4.13	□□□□□ -1.75
ATG2	YNL242W	LDH1	P38139	375 aa		4.13	□□□□□ -1.75
ATG2	YNL242W	YJL206C	P39529	758 aa		4.13	□□□□□ -1.75
ATG2	YNL242W	BIM1	P40013	344 aa		4.13	□□□□□ -1.75
ATG2	YNL242W	YGL138C	P53122	345 aa		4.13	□□□□□ -1.75
ATG2	YNL242W	SPC105	P53148	917 aa		4.13	□□□□□ -1.75
ATG2	YNL242W	RPT4	P53549	437 aa	Known RBP	4.13	□□□□□ -1.75
ATG2	YNL242W	YNR063W	P53749	607 aa		4.13	□□□□□ -1.75
ATG2	YNL242W	ALD6	P54115	500 aa	Known RBP	4.13	□□□□□ -1.75
ATG2	YNL242W	OSH6	Q02201	448 aa		4.13	□□□□□ -1.75
ATG2	YNL242W	YMR226C	Q05016	267 aa	Known RBP	4.13	□□□□□ -1.75
ATG2	YNL242W	PET122	P10355	254 aa		4.12	□□□□□ -1.75
ATG2	YNL242W	SEC15	P22224	910 aa		4.12	□□□□□ -1.75
ATG2	YNL242W	MRPL32	P25348	183 aa		4.12	□□□□□ -1.75
ATG2	YNL242W	RPC34	P32910	317 aa		4.12	□□□□□ -1.75
ATG2	YNL242W	COY1	P34237	679 aa		4.12	□□□□□ -1.75
ATG2	YNL242W	POP4	P38336	279 aa		4.12	□□□□□ -1.75
ATG2	YNL242W	RCK2	P38623	610 aa		4.12	□□□□□ -1.75
ATG2	YNL242W	PIK1	P39104	1066 aa		4.12	□□□□□ -1.75
ATG2	YNL242W	FAR3	P46671	204 aa		4.12	□□□□□ -1.75
ATG2	YNL242W	COP1	P53622	1201 aa	Known RBP	4.12	□□□□□ -1.75
ATG2	YNL242W	ASI2	P53895	289 aa		4.12	□□□□□ -1.75
ATG2	YNL242W	SMC5	Q08204	1093 aa		4.12	□□□□□ -1.75
ATG2	YNL242W	POM152	P39685	1337 aa		4.12	□□□□□ -1.75
ATG2	YNL242W	RPL6B	P05739	176 aa	Known RBP	4.12	□□□□□ -1.75
ATG2	YNL242W	PRP6	P19735	899 aa	Predicted RBP	4.12	□□□□□ -1.75
ATG2	YNL242W	DBP5	P20449	482 aa	Known RBP	4.12	□□□□□ -1.75
ATG2	YNL242W	TRK2	P28584	889 aa		4.12	□□□□□ -1.75
ATG2	YNL242W	RME1	P32338	300 aa	Known RBP	4.12	□□□□□ -1.75
ATG2	YNL242W	PAM1	P37304	830 aa	Known RBP	4.12	□□□□□ -1.75
ATG2	YNL242W	CST26	P38226	397 aa		4.12	□□□□□ -1.75
ATG2	YNL242W	FRT2	P39734	528 aa		4.12	□□□□□ -1.75
ATG2	YNL242W	RIC1	P40395	1056 aa		4.12	□□□□□ -1.75
ATG2	YNL242W	NIT1	P40447	199 aa		4.12	□□□□□ -1.75
ATG2	YNL242W	DIM1	P41819	318 aa	Known RBP	4.12	□□□□□ -1.75
ATG2	YNL242W	RGD2	P43556	714 aa		4.12	□□□□□ -1.75
ATG2	YNL242W	BNA3	P47039	444 aa	Known RBP	4.12	□□□□□ -1.75
ATG2	YNL242W	EAF6	P47128	113 aa		4.12	□□□□□ -1.75
ATG2	YNL242W	NUP84	P52891	726 aa		4.12	□□□□□ -1.75
ATG2	YNL242W	UTP8	P53276	713 aa	Known RBP	4.12	□□□□□ -1.75
ATG2	YNL242W	BIO4	P53630	237 aa		4.12	□□□□□ -1.75
ATG2	YNL242W	PGA2	P53903	129 aa		4.12	□□□□□ -1.75
ATG2	YNL242W	YDR179W-A	Q03983	463 aa		4.12	□□□□□ -1.75
ATG2	YNL242W	MYO5	Q04439	1219 aa	Known RBP	4.12	□□□□□ -1.75
ATG2	YNL242W	MCM21	Q06675	368 aa		4.12	□□□□□ -1.75
ATG2	YNL242W	AVO1	Q08236	1176 aa		4.12	□□□□□ -1.75
ATG2	YNL242W	TY3A-G	Q12173	290 aa		4.12	□□□□□ -1.75
ATG2	YNL242W	TY3A-I	Q99219	290 aa		4.12	□□□□□ -1.75
ATG2	YNL242W	CAF20	P12962	161 aa	Known RBP	4.12	□□□□□ -1.75
ATG2	YNL242W	CHS2	P14180	963 aa		4.12	□□□□□ -1.75
ATG2	YNL242W	ADE2	P21264	571 aa	Known RBP	4.12	□□□□□ -1.75
ATG2	YNL242W	GFD2	P25370	566 aa	Known RBP	4.12	□□□□□ -1.75
ATG2	YNL242W	RAD14	P28519	371 aa		4.12	□□□□□ -1.75
ATG2	YNL242W	YMR134W	P40207	237 aa		4.12	□□□□□ -1.75
ATG2	YNL242W	ARF3	P40994	183 aa	RIP-Chip data	4.12	□□□□□ -1.75	not detected
ATG2	YNL242W	ISM1	P48526	1002 aa		4.12	□□□□□ -1.75
ATG2	YNL242W	CNM67	P53865	581 aa	Known RBP	4.12	□□□□□ -1.75
ATG2	YNL242W	YET2	Q04210	160 aa		4.12	□□□□□ -1.75
ATG2	YNL242W	VPS36	Q06696	566 aa		4.12	□□□□□ -1.75
ATG2	YNL242W	AAD15	Q08361	143 aa		4.12	□□□□□ -1.75
ATG2	YNL242W	ILV2	P07342	687 aa	Known RBP	4.11	□□□□□ -1.75
ATG2	YNL242W	TUB1	P09733	447 aa	Known RBP	4.11	□□□□□ -1.75
ATG2	YNL242W	YML002W	P0CF17	737 aa		4.11	□□□□□ -1.75
ATG2	YNL242W	ATR1	P13090	542 aa		4.11	□□□□□ -1.75
ATG2	YNL242W	LCB1	P25045	558 aa	Known RBP	4.11	□□□□□ -1.75
ATG2	YNL242W	NGG1	P32494	702 aa		4.11	□□□□□ -1.75
ATG2	YNL242W	UTP11	P34247	250 aa	Predicted RBP	4.11	□□□□□ -1.75
ATG2	YNL242W	CUE2	P36075	443 aa	Known RBP	4.11	□□□□□ -1.75
ATG2	YNL242W	SMF2	P38778	549 aa		4.11	□□□□□ -1.75
ATG2	YNL242W	PES4	P39684	611 aa		4.11	□□□□□ -1.75
ATG2	YNL242W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected
ATG2	YNL242W	YML6	P51998	286 aa		4.11	□□□□□ -1.75
ATG2	YNL242W	COG2	P53271	262 aa		4.11	□□□□□ -1.75
ATG2	YNL242W	NOG2	P53742	486 aa	Known RBP	4.11	□□□□□ -1.75
ATG2	YNL242W	NOP15	P53927	220 aa	Predicted RBP	4.11	□□□□□ -1.75
ATG2	YNL242W	KTR5	P53966	522 aa	Predicted RBP	4.11	□□□□□ -1.75
ATG2	YNL242W	INA17	Q02888	182 aa		4.11	□□□□□ -1.75
ATG2	YNL242W	RPL17A	P05740	184 aa	Known RBP	4.11	□□□□□ -1.75
ATG2	YNL242W	CDC33	P07260	213 aa	Known RBP	4.11	□□□□□ -1.75
ATG2	YNL242W	SPS1	P08458	490 aa		4.11	□□□□□ -1.75
ATG2	YNL242W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected
ATG2	YNL242W	PAT1	P25644	796 aa	Known RBP	4.11	□□□□□ -1.75
ATG2	YNL242W	TRZ1	P36159	838 aa	Predicted RBP	4.11	□□□□□ -1.75
ATG2	YNL242W	SPL2	P38839	148 aa		4.11	□□□□□ -1.75
ATG2	YNL242W	END3	P39013	349 aa		4.11	□□□□□ -1.75
ATG2	YNL242W	MAM33	P40513	266 aa		4.11	□□□□□ -1.75
ATG2	YNL242W	HXT8	P40886	569 aa		4.11	□□□□□ -1.75
ATG2	YNL242W	YGR153W	P48238	217 aa		4.11	□□□□□ -1.75
ATG2	YNL242W	HMO1	Q03973	246 aa	Known RBP	4.11	□□□□□ -1.75
ATG2	YNL242W	RTT10	Q08924	1013 aa		4.11	□□□□□ -1.75
ATG2	YNL242W	TUS1	Q06412	1307 aa		4.11	□□□□□ -1.75
ATG2	YNL242W	ILV1	P00927	576 aa	Known RBP	4.11	□□□□□ -1.75
ATG2	YNL242W	SEN2	P16658	377 aa		4.11	□□□□□ -1.75
ATG2	YNL242W	IRE1	P32361	1115 aa		4.11	□□□□□ -1.75
ATG2	YNL242W	HXT3	P32466	567 aa	Known RBP	4.11	□□□□□ -1.75
ATG2	YNL242W	KTR2	P33550	425 aa		4.11	□□□□□ -1.75
ATG2	YNL242W	YBR032W	P38223	100 aa		4.11	□□□□□ -1.75
ATG2	YNL242W	FMP32	P43557	207 aa		4.11	□□□□□ -1.75
ATG2	YNL242W	LIA1	P47120	325 aa	Known RBP	4.11	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms