RNA–Protein interactions for RNA: YNL124W

NAF1, Transcript of RNA-binding protein required for the assembly of box H/ACA snoRNPs, yeast

Gene NAF1, Length 1,479 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NAF1	YNL124W	NMD3	P38861	518 aa	Known RBP	7.37	□□□□□ -1.23
NAF1	YNL124W	TMN3	P40071	706 aa		7.37	□□□□□ -1.23
NAF1	YNL124W	SEC9	P40357	651 aa		7.37	□□□□□ -1.23
NAF1	YNL124W	YNR014W	P53719	212 aa		7.37	□□□□□ -1.23
NAF1	YNL124W	YPL062W	Q02781	134 aa		7.37	□□□□□ -1.23
NAF1	YNL124W	RKM2	Q03942	479 aa		7.37	□□□□□ -1.23
NAF1	YNL124W	YDR344C	Q05510	147 aa		7.37	□□□□□ -1.23
NAF1	YNL124W	YDR278C	Q05612	105 aa		7.37	□□□□□ -1.23
NAF1	YNL124W	YCG1	Q06680	1035 aa		7.37	□□□□□ -1.23
NAF1	YNL124W	IRC10	Q08118	586 aa		7.37	□□□□□ -1.23
NAF1	YNL124W	AIM39	Q08223	395 aa		7.37	□□□□□ -1.23
NAF1	YNL124W	YOR387C	Q08910	206 aa		7.37	□□□□□ -1.23
NAF1	YNL124W	LPX1	Q12405	387 aa	Known RBP	7.37	□□□□□ -1.23
NAF1	YNL124W	ARP7	Q12406	477 aa		7.37	□□□□□ -1.23
NAF1	YNL124W	MTF1	P14908	341 aa	Known RBP	7.36	□□□□□ -1.23
NAF1	YNL124W	MSH1	P25846	959 aa		7.36	□□□□□ -1.23
NAF1	YNL124W	POL12	P38121	705 aa	Predicted RBP	7.36	□□□□□ -1.23
NAF1	YNL124W	SSP1	P38871	571 aa		7.36	□□□□□ -1.23
NAF1	YNL124W	KHA1	P40309	873 aa		7.36	□□□□□ -1.23
NAF1	YNL124W	SNZ3	P43545	298 aa		7.36	□□□□□ -1.23
NAF1	YNL124W	CNN1	P43618	361 aa		7.36	□□□□□ -1.23
NAF1	YNL124W	COQ6	P53318	479 aa		7.36	□□□□□ -1.23
NAF1	YNL124W	SNZ2	P53824	298 aa		7.36	□□□□□ -1.23
NAF1	YNL124W	JJJ1	P53863	590 aa		7.36	□□□□□ -1.23
NAF1	YNL124W	DIG1	Q03063	452 aa	Known RBP	7.36	□□□□□ -1.23
NAF1	YNL124W	PIR3	Q03180	325 aa		7.36	□□□□□ -1.23
NAF1	YNL124W	YMR018W	Q04364	514 aa		7.36	□□□□□ -1.23
NAF1	YNL124W	SOV1	Q04748	898 aa		7.36	□□□□□ -1.23
NAF1	YNL124W	SPE3	Q12074	293 aa	Known RBP	7.36	□□□□□ -1.23
NAF1	YNL124W	MCM16	Q12262	181 aa		7.36	□□□□□ -1.23
NAF1	YNL124W	YKL068W-A	Q3E826	78 aa		7.36	□□□□□ -1.23
NAF1	YNL124W	ERG11	P10614	530 aa		7.36	□□□□□ -1.23
NAF1	YNL124W	PET123	P17558	318 aa		7.36	□□□□□ -1.23
NAF1	YNL124W	SPT5	P27692	1063 aa	Known RBP	7.36	□□□□□ -1.23
NAF1	YNL124W	ISF1	P32488	338 aa		7.36	□□□□□ -1.23
NAF1	YNL124W	URA8	P38627	578 aa	Predicted RBP	7.36	□□□□□ -1.23
NAF1	YNL124W	YIL161W	P40449	235 aa	Known RBP	7.36	□□□□□ -1.23
NAF1	YNL124W	SAP185	P40856	1058 aa		7.36	□□□□□ -1.23
NAF1	YNL124W	UFE1	P41834	346 aa		7.36	□□□□□ -1.23
NAF1	YNL124W	BRO1	P48582	844 aa		7.36	□□□□□ -1.23
NAF1	YNL124W	YGR021W	P53212	290 aa		7.36	□□□□□ -1.23
NAF1	YNL124W	YGR283C	P53336	341 aa	Predicted RBP	7.36	□□□□□ -1.23
NAF1	YNL124W	PDH1	Q12428	516 aa	Known RBP	7.36	□□□□□ -1.23
NAF1	YNL124W	RPS14A	P06367	137 aa	Known RBP	7.35	□□□□□ -1.23
NAF1	YNL124W	HSF1	P10961	833 aa		7.35	□□□□□ -1.23
NAF1	YNL124W	PUT4	P15380	627 aa		7.35	□□□□□ -1.23
NAF1	YNL124W	SIS1	P25294	352 aa	Known RBP	7.35	□□□□□ -1.23
NAF1	YNL124W	DBF4	P32325	704 aa		7.35	□□□□□ -1.23
NAF1	YNL124W	PSE1	P32337	1089 aa	Known RBP	7.35	□□□□□ -1.23
NAF1	YNL124W	STE5	P32917	917 aa		7.35	□□□□□ -1.23
NAF1	YNL124W	HIS2	P38635	335 aa		7.35	□□□□□ -1.23
NAF1	YNL124W	RPS14B	P39516	138 aa	Known RBP	7.35	□□□□□ -1.23
NAF1	YNL124W	PSY2	P40164	858 aa		7.35	□□□□□ -1.23
NAF1	YNL124W	YIL054W	P40524	105 aa		7.35	□□□□□ -1.23
NAF1	YNL124W	CHS6	P40955	746 aa		7.35	□□□□□ -1.23
NAF1	YNL124W	LSB6	P42951	607 aa		7.35	□□□□□ -1.23
NAF1	YNL124W	TRM112	P53738	135 aa	Predicted RBP	7.35	□□□□□ -1.23
NAF1	YNL124W	BIO5	P53744	561 aa	Known RBP	7.35	□□□□□ -1.23
NAF1	YNL124W	SFB2	P53953	876 aa		7.35	□□□□□ -1.23
NAF1	YNL124W	KTR6	P54070	446 aa		7.35	□□□□□ -1.23
NAF1	YNL124W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	7.35	□□□□□ -1.23	not detected
NAF1	YNL124W	VPS5	Q92331	675 aa		7.35	□□□□□ -1.23
NAF1	YNL124W	MET16	P18408	261 aa	Predicted RBP	7.34	□□□□□ -1.23
NAF1	YNL124W	YIH1	P25637	258 aa		7.34	□□□□□ -1.23
NAF1	YNL124W	ABD1	P32783	436 aa	Predicted RBP	7.34	□□□□□ -1.23
NAF1	YNL124W	HSP78	P33416	811 aa		7.34	□□□□□ -1.23
NAF1	YNL124W	STO1	P34160	861 aa	Known RBP	7.34	□□□□□ -1.23
NAF1	YNL124W	ECM13	P38195	257 aa		7.34	□□□□□ -1.23
NAF1	YNL124W	ASG1	P40467	964 aa		7.34	□□□□□ -1.23
NAF1	YNL124W	MVP1	P40959	511 aa	Known RBP	7.34	□□□□□ -1.23
NAF1	YNL124W	NOG2	P53742	486 aa	Known RBP	7.34	□□□□□ -1.23
NAF1	YNL124W	SYH1	Q02875	849 aa	Known RBP	7.34	□□□□□ -1.23
NAF1	YNL124W	SML1	Q04964	104 aa		7.34	□□□□□ -1.23
NAF1	YNL124W	APC5	Q08683	685 aa		7.34	□□□□□ -1.23
NAF1	YNL124W	LCB4	Q12246	624 aa		7.34	□□□□□ -1.23
NAF1	YNL124W	CCP1	P00431	361 aa		7.33	□□□□□ -1.24
NAF1	YNL124W	SEC23	P15303	768 aa	Known RBP	7.33	□□□□□ -1.24
NAF1	YNL124W	EST1	P17214	699 aa	Predicted RBP	7.33	□□□□□ -1.24
NAF1	YNL124W	SWE1	P32944	819 aa		7.33	□□□□□ -1.24
NAF1	YNL124W	RRT2	P38332	387 aa		7.33	□□□□□ -1.24
NAF1	YNL124W	UBP7	P40453	1071 aa		7.33	□□□□□ -1.24
NAF1	YNL124W	TMA108	P40462	946 aa		7.33	□□□□□ -1.24
NAF1	YNL124W	MRS2	Q01926	470 aa		7.33	□□□□□ -1.24
NAF1	YNL124W	SEG1	Q04279	960 aa		7.33	□□□□□ -1.24
NAF1	YNL124W	UFO1	Q04511	668 aa		7.33	□□□□□ -1.24
NAF1	YNL124W	AAD4	Q07747	329 aa		7.33	□□□□□ -1.24
NAF1	YNL124W	SVS1	Q12254	260 aa		7.33	□□□□□ -1.24
NAF1	YNL124W	FAB1	P34756	2278 aa		7.32	□□□□□ -1.24
NAF1	YNL124W	ENO2	P00925	437 aa	Known RBP	7.32	□□□□□ -1.24
NAF1	YNL124W	TRX1	P22217	103 aa	Known RBP	7.32	□□□□□ -1.24
NAF1	YNL124W	BLI1	P35727	113 aa		7.32	□□□□□ -1.24
NAF1	YNL124W	KTR4	P38131	464 aa		7.32	□□□□□ -1.24
NAF1	YNL124W	LYS9	P38999	446 aa		7.32	□□□□□ -1.24
NAF1	YNL124W	EFM4	P40516	257 aa		7.32	□□□□□ -1.24
NAF1	YNL124W	YJR079W	P47126	109 aa		7.32	□□□□□ -1.24
NAF1	YNL124W	APT1	P49435	187 aa	Known RBP	7.32	□□□□□ -1.24
NAF1	YNL124W	KAP114	P53067	1004 aa		7.32	□□□□□ -1.24
NAF1	YNL124W	YNR061C	P53747	219 aa		7.32	□□□□□ -1.24
NAF1	YNL124W	ALF1	P53904	254 aa		7.32	□□□□□ -1.24
NAF1	YNL124W	RPN4	Q03465	531 aa		7.32	□□□□□ -1.24

Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms