RNA–Protein interactions for RNA: YMR288W

HSH155, Transcript of U2-snRNP associated splicing factor, yeastyeast

Gene HSH155, Length 2,916 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSH155YMR288W COG8Q04632 607 aa2.22□□□□□ -2.05
HSH155YMR288W CFT2Q12102 859 aaPredicted RBP2.22□□□□□ -2.05
HSH155YMR288W MDM12Q92328 271 aa2.22□□□□□ -2.05
HSH155YMR288W NOP14Q99207 810 aaKnown RBP2.22□□□□□ -2.05
HSH155YMR288W SSB1P11484 613 aaKnown RBP2.21□□□□□ -2.05
HSH155YMR288W RPA135P22138 1203 aaKnown RBP2.21□□□□□ -2.05
HSH155YMR288W YCL002CP25565 263 aa2.21□□□□□ -2.05
HSH155YMR288W NFU1P32860 256 aa2.21□□□□□ -2.05
HSH155YMR288W HSL7P38274 827 aa2.21□□□□□ -2.05
HSH155YMR288W CTF8P38877 133 aa2.21□□□□□ -2.05
HSH155YMR288W SSB2P40150 613 aaKnown RBP2.21□□□□□ -2.05
HSH155YMR288W DSD1P53095 428 aa2.21□□□□□ -2.05
HSH155YMR288W SDA1P53313 767 aaKnown RBP2.21□□□□□ -2.05
HSH155YMR288W NHX1Q04121 633 aa2.21□□□□□ -2.05
HSH155YMR288W YOL057WQ08225 711 aa2.21□□□□□ -2.05
HSH155YMR288W HAL9Q12180 1030 aa2.21□□□□□ -2.05
HSH155YMR288W KCS1Q12494 1050 aa2.21□□□□□ -2.05
HSH155YMR288W CDC9P04819 755 aa2.21□□□□□ -2.06
HSH155YMR288W POL3P15436 1097 aa2.21□□□□□ -2.06
HSH155YMR288W TSR4P25040 408 aa2.21□□□□□ -2.06
HSH155YMR288W MPE1P35728 441 aaKnown RBP2.21□□□□□ -2.06
HSH155YMR288W SPL2P38839 148 aa2.21□□□□□ -2.06
HSH155YMR288W NET1P47035 1189 aa2.21□□□□□ -2.06
HSH155YMR288W NRG1Q03125 231 aa2.21□□□□□ -2.06
HSH155YMR288W PRP42Q03776 544 aaKnown RBP2.21□□□□□ -2.06
HSH155YMR288W ENB1Q08299 606 aa2.21□□□□□ -2.06
HSH155YMR288W YEL1P34225 687 aa2.21□□□□□ -2.06
HSH155YMR288W THI80P35202 319 aa2.21□□□□□ -2.06
HSH155YMR288W VHR1P40522 640 aa2.21□□□□□ -2.06
HSH155YMR288W CAF16P43569 289 aa2.21□□□□□ -2.06
HSH155YMR288W RSC8P43609 557 aaKnown RBP2.21□□□□□ -2.06
HSH155YMR288W FCP1Q03254 732 aa2.21□□□□□ -2.06
HSH155YMR288W VPS64Q03944 604 aa2.21□□□□□ -2.06
HSH155YMR288W TRM11Q12463 433 aa2.21□□□□□ -2.06
HSH155YMR288W CDC6P09119 513 aa2.2□□□□□ -2.06
HSH155YMR288W SSD1P24276 1250 aaKnown RBP RIP-Chip data2.2□□□□□ -2.06not detected
HSH155YMR288W KAR4P25583 335 aa2.2□□□□□ -2.06
HSH155YMR288W CTS1P29029 562 aa2.2□□□□□ -2.06
HSH155YMR288W HOG1P32485 435 aa2.2□□□□□ -2.06
HSH155YMR288W TRM2P33753 639 aa2.2□□□□□ -2.06
HSH155YMR288W MTC2P34246 357 aa2.2□□□□□ -2.06
HSH155YMR288W KSP1P38691 1029 aaKnown RBP2.2□□□□□ -2.06
HSH155YMR288W PES4P39684 611 aa2.2□□□□□ -2.06
HSH155YMR288W ZIP2P53061 704 aa2.2□□□□□ -2.06
HSH155YMR288W DNM1P54861 757 aa2.2□□□□□ -2.06
HSH155YMR288W ECM16Q04217 1267 aaKnown RBP2.2□□□□□ -2.06
HSH155YMR288W EMI2Q04409 500 aaKnown RBP2.2□□□□□ -2.06
HSH155YMR288W GUD1Q07729 489 aa2.2□□□□□ -2.06
HSH155YMR288W MYO1P08964 1928 aa2.2□□□□□ -2.06
HSH155YMR288W MEC1P38111 2368 aa2.2□□□□□ -2.06
HSH155YMR288W SRD1P09007 221 aa2.2□□□□□ -2.06
HSH155YMR288W HEM1P09950 548 aaPredicted RBP2.2□□□□□ -2.06
HSH155YMR288W URK1P27515 501 aa2.2□□□□□ -2.06
HSH155YMR288W HRR25P29295 494 aaKnown RBP2.2□□□□□ -2.06
HSH155YMR288W LST4P34239 828 aa2.2□□□□□ -2.06
HSH155YMR288W RPT2P40327 437 aaKnown RBP2.2□□□□□ -2.06
HSH155YMR288W RPN7Q06103 429 aaKnown RBP2.2□□□□□ -2.06
HSH155YMR288W SWI1P09547 1314 aa2.19□□□□□ -2.06
HSH155YMR288W SEC21P32074 935 aaKnown RBP2.19□□□□□ -2.06
HSH155YMR288W FMP10P40098 244 aa2.19□□□□□ -2.06
HSH155YMR288W NOP2P40991 618 aaKnown RBP2.19□□□□□ -2.06
HSH155YMR288W YNL193WP53870 558 aa2.19□□□□□ -2.06
HSH155YMR288W GPD1Q00055 391 aaKnown RBP2.19□□□□□ -2.06
HSH155YMR288W DLT1Q04216 342 aa2.19□□□□□ -2.06
HSH155YMR288W TMA64Q04600 565 aaKnown RBP2.19□□□□□ -2.06
HSH155YMR288W NKP1Q12493 238 aa2.19□□□□□ -2.06
HSH155YMR288W RPP1P38786 293 aa2.19□□□□□ -2.06
HSH155YMR288W CRP1P38845 465 aaKnown RBP2.19□□□□□ -2.06
HSH155YMR288W RTR1P40084 226 aaPredicted RBP2.19□□□□□ -2.06
HSH155YMR288W FKH2P41813 862 aa2.19□□□□□ -2.06
HSH155YMR288W PMT3P47190 753 aa2.19□□□□□ -2.06
HSH155YMR288W EXG2P52911 562 aa2.19□□□□□ -2.06
HSH155YMR288W ASI2P53895 289 aa2.19□□□□□ -2.06
HSH155YMR288W IRC10Q08118 586 aa2.19□□□□□ -2.06
HSH155YMR288W YBR182C-AQ8TGU6 64 aa2.19□□□□□ -2.06
HSH155YMR288W MOT1P32333 1867 aa2.19□□□□□ -2.06
HSH155YMR288W YLR415CO13578 112 aa2.18□□□□□ -2.06
HSH155YMR288W SFL1P20134 766 aa2.18□□□□□ -2.06
HSH155YMR288W MEF1P25039 761 aa2.18□□□□□ -2.06
HSH155YMR288W PWP2P25635 923 aaKnown RBP2.18□□□□□ -2.06
HSH155YMR288W RPT3P33298 428 aaKnown RBP2.18□□□□□ -2.06
HSH155YMR288W OCT1P35999 772 aa2.18□□□□□ -2.06
HSH155YMR288W YBR259WP38338 688 aa2.18□□□□□ -2.06
HSH155YMR288W ACA1P39970 489 aa2.18□□□□□ -2.06
HSH155YMR288W MAM1P40065 302 aa2.18□□□□□ -2.06
HSH155YMR288W FAF1P40546 346 aaPredicted RBP2.18□□□□□ -2.06
HSH155YMR288W IRC4Q03036 179 aa2.18□□□□□ -2.06
HSH155YMR288W GAD1Q04792 585 aa2.18□□□□□ -2.06
HSH155YMR288W THI21Q08975 551 aa2.18□□□□□ -2.06
HSH155YMR288W PMI40P29952 429 aaKnown RBP2.18□□□□□ -2.06
HSH155YMR288W EFT1P32324 842 aaKnown RBP2.18□□□□□ -2.06
HSH155YMR288W STE14P32584 239 aa2.18□□□□□ -2.06
HSH155YMR288W FUI1P38196 639 aa2.18□□□□□ -2.06
HSH155YMR288W MSS4P38994 779 aa2.18□□□□□ -2.06
HSH155YMR288W ERP2P39704 215 aa2.18□□□□□ -2.06
HSH155YMR288W VPS27P40343 622 aaKnown RBP2.18□□□□□ -2.06
HSH155YMR288W PRP31P49704 494 aaPredicted RBP2.18□□□□□ -2.06
HSH155YMR288W YGL081WP53156 320 aa2.18□□□□□ -2.06
HSH155YMR288W COX18P53239 316 aa2.18□□□□□ -2.06
HSH155YMR288W MUS81Q04149 632 aaPredicted RBP2.18□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms