RNA–Protein interactions for RNA: YLR363C

NMD4, Transcript of Protein that may be involved in nonsense-mediated mRNA decay, yeast

Gene NMD4, Length 657 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NMD4	YLR363C	MRH1	Q12117	320 aa	Predicted RBP	6.15	□□□□□ -1.42
NMD4	YLR363C	PRP19	P32523	503 aa	Known RBP	6.14	□□□□□ -1.43
NMD4	YLR363C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	6.14	□□□□□ -1.43	not detected
NMD4	YLR363C	BEM4	P39011	633 aa		6.14	□□□□□ -1.43
NMD4	YLR363C	NUG1	P40010	520 aa	Known RBP	6.14	□□□□□ -1.43
NMD4	YLR363C	YNL195C	P40168	261 aa		6.14	□□□□□ -1.43
NMD4	YLR363C	PMT3	P47190	753 aa		6.14	□□□□□ -1.43
NMD4	YLR363C	DOS2	P54858	310 aa		6.14	□□□□□ -1.43
NMD4	YLR363C	ZRT2	Q12436	422 aa		6.14	□□□□□ -1.43
NMD4	YLR363C	ECM3	Q99252	613 aa		6.14	□□□□□ -1.43
NMD4	YLR363C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	6.13	□□□□□ -1.43	not detected
NMD4	YLR363C	PHO11	P35842	467 aa		6.13	□□□□□ -1.43
NMD4	YLR363C	PHO12	P38693	467 aa		6.13	□□□□□ -1.43
NMD4	YLR363C	FHN1	P53279	174 aa		6.13	□□□□□ -1.43
NMD4	YLR363C	VHS3	Q08438	674 aa		6.13	□□□□□ -1.43
NMD4	YLR363C	RRP5	Q05022	1729 aa	Known RBP	6.13	□□□□□ -1.43
NMD4	YLR363C	KIN3	P22209	435 aa		6.12	□□□□□ -1.43
NMD4	YLR363C	NDC80	P40460	691 aa		6.12	□□□□□ -1.43
NMD4	YLR363C	RGC1	Q06108	1083 aa	Known RBP	6.12	□□□□□ -1.43
NMD4	YLR363C	THI22	Q06490	572 aa		6.12	□□□□□ -1.43
NMD4	YLR363C	AIM44	Q99299	758 aa		6.12	□□□□□ -1.43
NMD4	YLR363C	ADE6	P38972	1358 aa	Known RBP	6.11	□□□□□ -1.43
NMD4	YLR363C	ERG20	P08524	352 aa	Known RBP	6.11	□□□□□ -1.43
NMD4	YLR363C	BIT2	P38346	545 aa		6.11	□□□□□ -1.43
NMD4	YLR363C	ARG2	P40360	574 aa		6.11	□□□□□ -1.43
NMD4	YLR363C	UME1	Q03010	460 aa		6.11	□□□□□ -1.43
NMD4	YLR363C	YMR210W	Q03649	449 aa		6.11	□□□□□ -1.43
NMD4	YLR363C	MTQ2	Q03920	221 aa	Predicted RBP	6.11	□□□□□ -1.43
NMD4	YLR363C	MLH3	Q12083	715 aa		6.11	□□□□□ -1.43
NMD4	YLR363C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	6.11	□□□□□ -1.43	not detected
NMD4	YLR363C	PSK1	P31374	1356 aa		6.1	□□□□□ -1.43
NMD4	YLR363C	NUP145	P49687	1317 aa		6.1	□□□□□ -1.43
NMD4	YLR363C	GFA1	P14742	717 aa	Known RBP	6.1	□□□□□ -1.43
NMD4	YLR363C	IMG2	P25642	146 aa	Predicted RBP	6.1	□□□□□ -1.43
NMD4	YLR363C	PET127	P32606	800 aa		6.1	□□□□□ -1.43
NMD4	YLR363C	BCS1	P32839	456 aa		6.1	□□□□□ -1.43
NMD4	YLR363C	PIG2	P40187	538 aa		6.1	□□□□□ -1.43
NMD4	YLR363C	CCT5	P40413	562 aa	Known RBP	6.1	□□□□□ -1.43
NMD4	YLR363C	YGR153W	P48238	217 aa		6.1	□□□□□ -1.43
NMD4	YLR363C	CTR1	P49573	406 aa		6.1	□□□□□ -1.43
NMD4	YLR363C	ATG4	P53867	494 aa		6.1	□□□□□ -1.43
NMD4	YLR363C	POM34	Q12445	299 aa		6.1	□□□□□ -1.43
NMD4	YLR363C	ROM2	P51862	1356 aa	Known RBP	6.09	□□□□□ -1.43
NMD4	YLR363C	FRS1	P15624	595 aa	Known RBP	6.09	□□□□□ -1.43
NMD4	YLR363C	PRP28	P23394	588 aa		6.09	□□□□□ -1.43
NMD4	YLR363C	DMC1	P25453	334 aa		6.09	□□□□□ -1.43
NMD4	YLR363C	SEC6	P32844	805 aa		6.09	□□□□□ -1.43
NMD4	YLR363C	GLG1	P36143	616 aa		6.09	□□□□□ -1.43
NMD4	YLR363C	BRN1	P38170	754 aa		6.09	□□□□□ -1.43
NMD4	YLR363C	YJL206C	P39529	758 aa		6.09	□□□□□ -1.43
NMD4	YLR363C	GZF3	P42944	551 aa	Known RBP	6.09	□□□□□ -1.43
NMD4	YLR363C	YLR407W	Q06070	228 aa		6.09	□□□□□ -1.43
NMD4	YLR363C	VPS36	Q06696	566 aa		6.09	□□□□□ -1.43
NMD4	YLR363C	YKU70	P32807	602 aa		6.08	□□□□□ -1.44
NMD4	YLR363C	VPS73	P53142	486 aa	Known RBP	6.08	□□□□□ -1.44
NMD4	YLR363C	YTM1	Q12024	460 aa	Predicted RBP	6.08	□□□□□ -1.44
NMD4	YLR363C	TAF3	Q12297	353 aa		6.08	□□□□□ -1.44
NMD4	YLR363C	SWI6	P09959	803 aa		6.07	□□□□□ -1.44
NMD4	YLR363C	YEF3	P16521	1044 aa	Known RBP	6.07	□□□□□ -1.44
NMD4	YLR363C	THR1	P17423	357 aa	Known RBP	6.07	□□□□□ -1.44
NMD4	YLR363C	HCA4	P20448	770 aa	Known RBP	6.07	□□□□□ -1.44
NMD4	YLR363C	SEC15	P22224	910 aa		6.07	□□□□□ -1.44
NMD4	YLR363C	YPT7	P32939	208 aa		6.07	□□□□□ -1.44
NMD4	YLR363C	TDP1	P38319	544 aa		6.07	□□□□□ -1.44
NMD4	YLR363C	BIT61	P47041	543 aa		6.07	□□□□□ -1.44
NMD4	YLR363C	HFD1	Q04458	532 aa		6.07	□□□□□ -1.44
NMD4	YLR363C	VBA4	Q04602	768 aa	Known RBP	6.07	□□□□□ -1.44
NMD4	YLR363C	CHS5	Q12114	671 aa	Known RBP	6.07	□□□□□ -1.44
NMD4	YLR363C	USV1	Q12132	391 aa		6.07	□□□□□ -1.44
NMD4	YLR363C	RSF2	P46974	1380 aa		6.06	□□□□□ -1.44
NMD4	YLR363C	ABF1	P14164	731 aa		6.06	□□□□□ -1.44
NMD4	YLR363C	SPE2	P21182	396 aa		6.06	□□□□□ -1.44
NMD4	YLR363C	KIN82	P25341	720 aa		6.06	□□□□□ -1.44
NMD4	YLR363C	FEN2	P25621	512 aa	Known RBP	6.06	□□□□□ -1.44
NMD4	YLR363C	BDH2	P39713	417 aa		6.06	□□□□□ -1.44
NMD4	YLR363C	RPN11	P43588	306 aa	Known RBP	6.06	□□□□□ -1.44
NMD4	YLR363C	YGR237C	P50089	785 aa		6.06	□□□□□ -1.44
NMD4	YLR363C	UBS1	P38290	277 aa		6.05	□□□□□ -1.44
NMD4	YLR363C	CCT7	P42943	550 aa	Known RBP	6.05	□□□□□ -1.44
NMD4	YLR363C	YGL081W	P53156	320 aa		6.05	□□□□□ -1.44
NMD4	YLR363C	ECM9	Q02202	377 aa		6.05	□□□□□ -1.44
NMD4	YLR363C	FAP7	Q12055	197 aa	Predicted RBP	6.05	□□□□□ -1.44
NMD4	YLR363C	LEU2	P04173	364 aa	Predicted RBP	6.04	□□□□□ -1.44
NMD4	YLR363C	RPS9B	P05755	195 aa	Known RBP	6.04	□□□□□ -1.44
NMD4	YLR363C	PRP22	P24384	1145 aa	Known RBP	6.04	□□□□□ -1.44
NMD4	YLR363C	OAF1	P39720	1047 aa	Predicted RBP	6.04	□□□□□ -1.44
NMD4	YLR363C	YIL077C	P40508	320 aa		6.04	□□□□□ -1.44
NMD4	YLR363C	DOT5	P40553	215 aa		6.04	□□□□□ -1.44
NMD4	YLR363C	GPP1	P41277	250 aa	Known RBP	6.04	□□□□□ -1.44
NMD4	YLR363C	MNN11	P46985	422 aa	Known RBP	6.04	□□□□□ -1.44
NMD4	YLR363C	TAH11	P47112	604 aa		6.04	□□□□□ -1.44
NMD4	YLR363C	GPG1	P53130	126 aa		6.04	□□□□□ -1.44
NMD4	YLR363C	GIS1	Q03833	894 aa		6.04	□□□□□ -1.44
NMD4	YLR363C	RPS21B	Q3E754	87 aa	Known RBP	6.04	□□□□□ -1.44
NMD4	YLR363C	SEC65	P29478	273 aa		6.03	□□□□□ -1.44
NMD4	YLR363C	DID4	P36108	232 aa		6.03	□□□□□ -1.44
NMD4	YLR363C	HXT6	P39003	570 aa	Known RBP	6.03	□□□□□ -1.44
NMD4	YLR363C	HXT7	P39004	570 aa		6.03	□□□□□ -1.44
NMD4	YLR363C	PXA1	P41909	870 aa		6.03	□□□□□ -1.44
NMD4	YLR363C	MPS3	P47069	682 aa		6.03	□□□□□ -1.44

Retrieved 100 of 5,963 RNA–protein pairs in 23 ms