RNA–Protein interactions for RNA: YLL002W

RTT109, Transcript of Histone acetyltransferase, yeast

Gene RTT109, Length 1,311 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTT109	YLL002W	YIR042C	P40586	236 aa		4.14	□□□□□ -1.75
RTT109	YLL002W	MUP1	P50276	574 aa		4.14	□□□□□ -1.75
RTT109	YLL002W	HEF3	P53978	1044 aa	Known RBP	4.14	□□□□□ -1.75
RTT109	YLL002W	RNT1	Q02555	471 aa		4.14	□□□□□ -1.75
RTT109	YLL002W	THI22	Q06490	572 aa		4.14	□□□□□ -1.75
RTT109	YLL002W	APL2	P36000	726 aa	Predicted RBP	4.13	□□□□□ -1.75
RTT109	YLL002W	TRZ1	P36159	838 aa	Predicted RBP	4.13	□□□□□ -1.75
RTT109	YLL002W	ECM1	P39715	212 aa		4.13	□□□□□ -1.75
RTT109	YLL002W	PIL1	P53252	339 aa	Known RBP	4.13	□□□□□ -1.75
RTT109	YLL002W	RIA1	P53893	1110 aa		4.13	□□□□□ -1.75
RTT109	YLL002W	ARP4	P80428	489 aa		4.13	□□□□□ -1.75
RTT109	YLL002W	REC102	Q02721	264 aa		4.13	□□□□□ -1.75
RTT109	YLL002W	CTK1	Q03957	528 aa	Known RBP	4.13	□□□□□ -1.75
RTT109	YLL002W	MCM21	Q06675	368 aa		4.13	□□□□□ -1.75
RTT109	YLL002W	YTM1	Q12024	460 aa	Predicted RBP	4.13	□□□□□ -1.75
RTT109	YLL002W	PRD1	P25375	712 aa		4.12	□□□□□ -1.75
RTT109	YLL002W	PRP45	P28004	379 aa	Predicted RBP	4.12	□□□□□ -1.75
RTT109	YLL002W	HIS7	P33734	552 aa	Known RBP	4.12	□□□□□ -1.75
RTT109	YLL002W	SSZ1	P38788	538 aa	Known RBP	4.12	□□□□□ -1.75
RTT109	YLL002W	YHR202W	P38887	602 aa		4.12	□□□□□ -1.75
RTT109	YLL002W	YIL089W	P40500	205 aa		4.12	□□□□□ -1.75
RTT109	YLL002W	GZF3	P42944	551 aa	Known RBP	4.12	□□□□□ -1.75
RTT109	YLL002W	SET2	P46995	733 aa	Known RBP	4.12	□□□□□ -1.75
RTT109	YLL002W	YJR039W	P47107	1121 aa		4.12	□□□□□ -1.75
RTT109	YLL002W	BUL1	P48524	976 aa		4.12	□□□□□ -1.75
RTT109	YLL002W	RSC1	P53236	928 aa		4.12	□□□□□ -1.75
RTT109	YLL002W	ERG5	P54781	538 aa		4.12	□□□□□ -1.75
RTT109	YLL002W	ARG5,6	Q01217	863 aa		4.12	□□□□□ -1.75
RTT109	YLL002W	ECM16	Q04217	1267 aa	Known RBP	4.12	□□□□□ -1.75
RTT109	YLL002W	YLR040C	Q07988	224 aa		4.12	□□□□□ -1.75
RTT109	YLL002W	SGO1	Q08490	590 aa		4.12	□□□□□ -1.75
RTT109	YLL002W	FRE5	Q08908	694 aa		4.12	□□□□□ -1.75
RTT109	YLL002W	DCS2	Q12123	353 aa		4.12	□□□□□ -1.75
RTT109	YLL002W	YDR034W-B	Q6Q5X2	51 aa		4.12	□□□□□ -1.75
RTT109	YLL002W	ALG7	P07286	448 aa		4.11	□□□□□ -1.75
RTT109	YLL002W	PYC1	P11154	1178 aa	Known RBP	4.11	□□□□□ -1.75
RTT109	YLL002W	LAT1	P12695	482 aa	Known RBP	4.11	□□□□□ -1.75
RTT109	YLL002W	RKM3	P38222	552 aa		4.11	□□□□□ -1.75
RTT109	YLL002W	GPP1	P41277	250 aa	Known RBP	4.11	□□□□□ -1.75
RTT109	YLL002W	GPG1	P53130	126 aa		4.11	□□□□□ -1.75
RTT109	YLL002W	ISA1	Q07821	250 aa	Predicted RBP	4.11	□□□□□ -1.75
RTT109	YLL002W	ATG11	Q12527	1178 aa		4.11	□□□□□ -1.75
RTT109	YLL002W	YHR112C	P38716	378 aa		4.1	□□□□□ -1.75
RTT109	YLL002W	OAF1	P39720	1047 aa	Predicted RBP	4.1	□□□□□ -1.75
RTT109	YLL002W	TPM2	P40414	161 aa		4.1	□□□□□ -1.75
RTT109	YLL002W	BRE5	P53741	515 aa	Known RBP	4.1	□□□□□ -1.75
RTT109	YLL002W	TEX1	P53851	422 aa	Known RBP	4.1	□□□□□ -1.75
RTT109	YLL002W	PTA1	Q01329	785 aa	Predicted RBP	4.1	□□□□□ -1.75
RTT109	YLL002W	LEE1	Q02799	301 aa	Known RBP	4.1	□□□□□ -1.75
RTT109	YLL002W	YMR210W	Q03649	449 aa		4.1	□□□□□ -1.75
RTT109	YLL002W	YMR206W	Q03695	313 aa		4.1	□□□□□ -1.75
RTT109	YLL002W	YHM2	Q04013	314 aa		4.1	□□□□□ -1.75
RTT109	YLL002W	RTT109	Q07794	436 aa		4.1	□□□□□ -1.75
RTT109	YLL002W	TRM13	Q12383	476 aa		4.1	□□□□□ -1.75
RTT109	YLL002W	FMP27	Q06179	2628 aa		4.1	□□□□□ -1.75
RTT109	YLL002W	PPR1	P07272	904 aa	Predicted RBP	4.09	□□□□□ -1.75
RTT109	YLL002W	SSB1	P11484	613 aa	Known RBP	4.09	□□□□□ -1.75
RTT109	YLL002W	RNR1	P21524	888 aa	Known RBP	4.09	□□□□□ -1.75
RTT109	YLL002W	SEC15	P22224	910 aa		4.09	□□□□□ -1.75
RTT109	YLL002W	MVD1	P32377	396 aa	Known RBP	4.09	□□□□□ -1.75
RTT109	YLL002W	UTP20	P35194	2493 aa	Known RBP	4.09	□□□□□ -1.75
RTT109	YLL002W	DID4	P36108	232 aa		4.09	□□□□□ -1.75
RTT109	YLL002W	YBR053C	P38235	358 aa		4.09	□□□□□ -1.75
RTT109	YLL002W	CHS7	P38843	316 aa		4.09	□□□□□ -1.75
RTT109	YLL002W	BDH2	P39713	417 aa		4.09	□□□□□ -1.75
RTT109	YLL002W	NUG1	P40010	520 aa	Known RBP	4.09	□□□□□ -1.75
RTT109	YLL002W	SSB2	P40150	613 aa	Known RBP	4.09	□□□□□ -1.75
RTT109	YLL002W	MNN11	P46985	422 aa	Known RBP	4.09	□□□□□ -1.75
RTT109	YLL002W	YJL163C	P46996	555 aa		4.09	□□□□□ -1.75
RTT109	YLL002W	SMC3	P47037	1230 aa		4.09	□□□□□ -1.75
RTT109	YLL002W	CTF4	Q01454	927 aa		4.09	□□□□□ -1.75
RTT109	YLL002W	YOL073C	Q08232	322 aa		4.09	□□□□□ -1.75
RTT109	YLL002W	DIA2	Q08496	732 aa	Predicted RBP	4.09	□□□□□ -1.75
RTT109	YLL002W	TRE2	Q08693	809 aa		4.09	□□□□□ -1.75
RTT109	YLL002W	ECM3	Q99252	613 aa		4.09	□□□□□ -1.75
RTT109	YLL002W	TY4B-H	P0C2J7	1802 aa		4.09	□□□□□ -1.76
RTT109	YLL002W	TY4B-J	P47024	1803 aa		4.09	□□□□□ -1.76
RTT109	YLL002W	ERG20	P08524	352 aa	Known RBP	4.08	□□□□□ -1.76
RTT109	YLL002W	SEC65	P29478	273 aa		4.08	□□□□□ -1.76
RTT109	YLL002W	AKL1	P38080	1108 aa	Known RBP	4.08	□□□□□ -1.76
RTT109	YLL002W	TCD1	P38756	429 aa		4.08	□□□□□ -1.76
RTT109	YLL002W	CCT3	P39077	534 aa	Known RBP	4.08	□□□□□ -1.76
RTT109	YLL002W	RAD26	P40352	1085 aa		4.08	□□□□□ -1.76
RTT109	YLL002W	CCT5	P40413	562 aa	Known RBP	4.08	□□□□□ -1.76
RTT109	YLL002W	DAS1	P47005	663 aa		4.08	□□□□□ -1.76
RTT109	YLL002W	MTL1	P53214	551 aa		4.08	□□□□□ -1.76
RTT109	YLL002W	ECM9	Q02202	377 aa		4.08	□□□□□ -1.76
RTT109	YLL002W	TAP42	Q04372	366 aa		4.08	□□□□□ -1.76
RTT109	YLL002W	ADY4	Q05955	493 aa		4.08	□□□□□ -1.76
RTT109	YLL002W	IRC13	Q08630	104 aa		4.08	□□□□□ -1.76
RTT109	YLL002W	RMP1	Q12530	201 aa		4.08	□□□□□ -1.76
RTT109	YLL002W	RIM15	P43565	1770 aa		4.08	□□□□□ -1.76
RTT109	YLL002W	FIG2	P25653	1609 aa		4.08	□□□□□ -1.76
RTT109	YLL002W	YRF1-3	P0CX14	1859 aa		4.08	□□□□□ -1.76
RTT109	YLL002W	YRF1-7	P0CX15	1859 aa		4.08	□□□□□ -1.76
RTT109	YLL002W	YRF1-6	P53819	1859 aa		4.08	□□□□□ -1.76
RTT109	YLL002W	RAD50	P12753	1312 aa		4.07	□□□□□ -1.76
RTT109	YLL002W	IRA1	P18963	3092 aa		4.07	□□□□□ -1.76
RTT109	YLL002W	IMG2	P25642	146 aa	Predicted RBP	4.07	□□□□□ -1.76
RTT109	YLL002W	RPN12	P32496	274 aa		4.07	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 147.4 ms