RNA–Protein interactions for RNA: YKL124W

SSH4, Transcript of Specificity factor required for Rsp5p-dependent ubiquitination, yeastyeast

Gene SSH4, Length 1,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSH4YKL124W ECM3Q99252 613 aa4.71□□□□□ -1.66
SSH4YKL124W TRS33Q99394 268 aa4.71□□□□□ -1.66
SSH4YKL124W AI5_BETAQ9ZZX0 354 aa4.71□□□□□ -1.66
SSH4YKL124W RPS3P05750 240 aaKnown RBP4.7□□□□□ -1.66
SSH4YKL124W CDC37P06101 506 aaKnown RBP4.7□□□□□ -1.66
SSH4YKL124W CMP2P14747 604 aa4.7□□□□□ -1.66
SSH4YKL124W VBA3P25594 458 aa4.7□□□□□ -1.66
SSH4YKL124W SPT5P27692 1063 aaKnown RBP4.7□□□□□ -1.66
SSH4YKL124W DSS4P32601 143 aa4.7□□□□□ -1.66
SSH4YKL124W VBA5P36172 582 aa4.7□□□□□ -1.66
SSH4YKL124W ABZ1P37254 787 aaPredicted RBP4.7□□□□□ -1.66
SSH4YKL124W YHR219WP38900 624 aa4.7□□□□□ -1.66
SSH4YKL124W MVP1P40959 511 aaKnown RBP4.7□□□□□ -1.66
SSH4YKL124W SBE2P42223 864 aaKnown RBP4.7□□□□□ -1.66
SSH4YKL124W ZAP1P47043 880 aa4.7□□□□□ -1.66
SSH4YKL124W TIM54P47045 478 aa4.7□□□□□ -1.66
SSH4YKL124W UTP8P53276 713 aaKnown RBP4.7□□□□□ -1.66
SSH4YKL124W BIO5P53744 561 aaKnown RBP4.7□□□□□ -1.66
SSH4YKL124W ESBP6P53918 673 aa4.7□□□□□ -1.66
SSH4YKL124W MUB1Q03162 620 aa4.7□□□□□ -1.66
SSH4YKL124W SXM1Q04175 944 aaKnown RBP4.7□□□□□ -1.66
SSH4YKL124W BSP1Q06604 576 aa4.7□□□□□ -1.66
SSH4YKL124W YPR172WQ06608 200 aa4.7□□□□□ -1.66
SSH4YKL124W NSE1Q07913 336 aa4.7□□□□□ -1.66
SSH4YKL124W NOP58Q12499 511 aaKnown RBP4.7□□□□□ -1.66
SSH4YKL124W YEL077CQ3E7X8 1277 aa4.7□□□□□ -1.66
SSH4YKL124W TRP2P00899 507 aaKnown RBP4.69□□□□□ -1.66
SSH4YKL124W STE11P23561 717 aa4.69□□□□□ -1.66
SSH4YKL124W SGF29P25554 259 aa4.69□□□□□ -1.66
SSH4YKL124W MSP1P28737 362 aa4.69□□□□□ -1.66
SSH4YKL124W CSG2P35206 410 aa4.69□□□□□ -1.66
SSH4YKL124W PIM1P36775 1133 aa4.69□□□□□ -1.66
SSH4YKL124W POL12P38121 705 aaPredicted RBP4.69□□□□□ -1.66
SSH4YKL124W SIF2P38262 535 aa4.69□□□□□ -1.66
SSH4YKL124W APE4P38821 490 aa4.69□□□□□ -1.66
SSH4YKL124W FHL1P39521 936 aa4.69□□□□□ -1.66
SSH4YKL124W LEM3P42838 414 aa4.69□□□□□ -1.66
SSH4YKL124W GYP8P43570 497 aa4.69□□□□□ -1.66
SSH4YKL124W CSN12P47130 423 aa4.69□□□□□ -1.66
SSH4YKL124W SPO20Q04359 397 aa4.69□□□□□ -1.66
SSH4YKL124W SPO75Q07798 868 aa4.69□□□□□ -1.66
SSH4YKL124W YPQ1Q12010 308 aa4.69□□□□□ -1.66
SSH4YKL124W NBP2Q12163 236 aa4.69□□□□□ -1.66
SSH4YKL124W PDH1Q12428 516 aaKnown RBP4.69□□□□□ -1.66
SSH4YKL124W FAB1P34756 2278 aa4.69□□□□□ -1.66
SSH4YKL124W RAS1P01119 309 aa4.69□□□□□ -1.66
SSH4YKL124W YER152CP10356 443 aa4.69□□□□□ -1.66
SSH4YKL124W CBF2P32504 956 aa4.69□□□□□ -1.66
SSH4YKL124W YBL036CP38197 257 aa4.69□□□□□ -1.66
SSH4YKL124W HSE1P38753 452 aa4.69□□□□□ -1.66
SSH4YKL124W DYS1P38791 387 aa4.69□□□□□ -1.66
SSH4YKL124W NUP60P39705 539 aa4.69□□□□□ -1.66
SSH4YKL124W YTA12P40341 825 aa4.69□□□□□ -1.66
SSH4YKL124W GUF1P46943 645 aa4.69□□□□□ -1.66
SSH4YKL124W STR2P47164 639 aa4.69□□□□□ -1.66
SSH4YKL124W MND1P53102 219 aa4.69□□□□□ -1.66
SSH4YKL124W YGL036WP53185 909 aaPredicted RBP4.69□□□□□ -1.66
SSH4YKL124W SFB2P53953 876 aa4.69□□□□□ -1.66
SSH4YKL124W TMN2Q04562 672 aa4.69□□□□□ -1.66
SSH4YKL124W YPR109WQ06104 294 aa4.69□□□□□ -1.66
SSH4YKL124W TSR1Q07381 788 aaKnown RBP4.69□□□□□ -1.66
SSH4YKL124W BUD20Q08004 166 aaPredicted RBP4.69□□□□□ -1.66
SSH4YKL124W TRE1Q08919 783 aa4.69□□□□□ -1.66
SSH4YKL124W NDJ1Q12366 352 aa4.69□□□□□ -1.66
SSH4YKL124W PRT1P06103 763 aaKnown RBP4.68□□□□□ -1.66
SSH4YKL124W RGR1P19263 1082 aa4.68□□□□□ -1.66
SSH4YKL124W YET1P35723 206 aa4.68□□□□□ -1.66
SSH4YKL124W YBR056WP38081 501 aa4.68□□□□□ -1.66
SSH4YKL124W NEM1P38757 446 aa4.68□□□□□ -1.66
SSH4YKL124W MIP6P38760 659 aaKnown RBP4.68□□□□□ -1.66
SSH4YKL124W GGA2P38817 585 aaKnown RBP4.68□□□□□ -1.66
SSH4YKL124W DRN1P53255 507 aaKnown RBP4.68□□□□□ -1.66
SSH4YKL124W ELA1P53861 379 aaPredicted RBP4.68□□□□□ -1.66
SSH4YKL124W YPL062WQ02781 134 aa4.68□□□□□ -1.66
SSH4YKL124W ECM22Q05958 814 aaPredicted RBP4.68□□□□□ -1.66
SSH4YKL124W FLC1Q08967 793 aa4.68□□□□□ -1.66
SSH4YKL124W MPD2Q99316 277 aa4.68□□□□□ -1.66
SSH4YKL124W RPS14AP06367 137 aaKnown RBP4.67□□□□□ -1.66
SSH4YKL124W PPR1P07272 904 aaPredicted RBP4.67□□□□□ -1.66
SSH4YKL124W HOM3P10869 527 aa4.67□□□□□ -1.66
SSH4YKL124W PPH22P23595 377 aa4.67□□□□□ -1.66
SSH4YKL124W DAL2P25335 343 aa4.67□□□□□ -1.66
SSH4YKL124W HCM1P25364 564 aa4.67□□□□□ -1.66
SSH4YKL124W LRE1P25579 583 aaKnown RBP4.67□□□□□ -1.66
SSH4YKL124W GCD11P32481 527 aaKnown RBP4.67□□□□□ -1.66
SSH4YKL124W ECM32P32644 1121 aaKnown RBP4.67□□□□□ -1.66
SSH4YKL124W HSP78P33416 811 aa4.67□□□□□ -1.66
SSH4YKL124W RPC25P35718 212 aa4.67□□□□□ -1.66
SSH4YKL124W PSY4P38193 441 aa4.67□□□□□ -1.66
SSH4YKL124W ATG12P38316 186 aa4.67□□□□□ -1.66
SSH4YKL124W YBR225WP38321 900 aa4.67□□□□□ -1.66
SSH4YKL124W RPS14BP39516 138 aaKnown RBP4.67□□□□□ -1.66
SSH4YKL124W AVT2P39981 480 aa4.67□□□□□ -1.66
SSH4YKL124W MDJ2P42834 146 aa4.67□□□□□ -1.66
SSH4YKL124W LSB3P43603 459 aaKnown RBP4.67□□□□□ -1.66
SSH4YKL124W RSM26P47141 266 aa4.67□□□□□ -1.66
SSH4YKL124W YGR016WP53209 190 aa4.67□□□□□ -1.66
SSH4YKL124W RSC1P53236 928 aa4.67□□□□□ -1.66
SSH4YKL124W HOL1P53389 586 aa4.67□□□□□ -1.66
SSH4YKL124W YHM2Q04013 314 aa4.67□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms