RNA–Protein interactions for RNA: YKL068W

NUP100, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP100, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP100YKL068W MCM6P53091 1017 aaKnown RBP2.5□□□□□ -2.01
NUP100YKL068W YNR061CP53747 219 aa2.5□□□□□ -2.01
NUP100YKL068W ELA1P53861 379 aaPredicted RBP2.5□□□□□ -2.01
NUP100YKL068W MDM38Q08179 573 aa2.5□□□□□ -2.01
NUP100YKL068W CWC2Q12046 339 aaPredicted RBP2.5□□□□□ -2.01
NUP100YKL068W TY4B-HP0C2J7 1802 aa2.5□□□□□ -2.01
NUP100YKL068W HSF1P10961 833 aa2.5□□□□□ -2.01
NUP100YKL068W PMS1P14242 873 aa2.5□□□□□ -2.01
NUP100YKL068W SRO9P25567 434 aaKnown RBP2.5□□□□□ -2.01
NUP100YKL068W GPI10P30777 616 aa2.5□□□□□ -2.01
NUP100YKL068W REC104P33323 182 aa2.5□□□□□ -2.01
NUP100YKL068W OAF3P36023 863 aa2.5□□□□□ -2.01
NUP100YKL068W YKL077WP36081 392 aa2.5□□□□□ -2.01
NUP100YKL068W ALG3P38179 458 aa2.5□□□□□ -2.01
NUP100YKL068W SAW1P39735 261 aa2.5□□□□□ -2.01
NUP100YKL068W PUG1P40100 303 aa2.5□□□□□ -2.01
NUP100YKL068W FET4P40988 552 aa2.5□□□□□ -2.01
NUP100YKL068W SLS1P42900 643 aa2.5□□□□□ -2.01
NUP100YKL068W CIR1P42940 261 aa2.5□□□□□ -2.01
NUP100YKL068W PTK2P47116 818 aaKnown RBP2.5□□□□□ -2.01
NUP100YKL068W PSP2P50109 593 aaKnown RBP2.5□□□□□ -2.01
NUP100YKL068W ATP25Q03153 612 aa2.5□□□□□ -2.01
NUP100YKL068W HOT1Q03213 719 aa2.5□□□□□ -2.01
NUP100YKL068W COG8Q04632 607 aa2.5□□□□□ -2.01
NUP100YKL068W RSC2Q06488 889 aa2.5□□□□□ -2.01
NUP100YKL068W YPR172WQ06608 200 aa2.5□□□□□ -2.01
NUP100YKL068W HFI1Q12060 488 aa2.5□□□□□ -2.01
NUP100YKL068W RVB2Q12464 471 aaKnown RBP2.5□□□□□ -2.01
NUP100YKL068W SEM1O94742 89 aa2.49□□□□□ -2.01
NUP100YKL068W RAS1P01119 309 aa2.49□□□□□ -2.01
NUP100YKL068W ARG3P05150 338 aa2.49□□□□□ -2.01
NUP100YKL068W CKA1P15790 372 aa2.49□□□□□ -2.01
NUP100YKL068W PFK2P16862 959 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01not detected
NUP100YKL068W THR1P17423 357 aaKnown RBP2.49□□□□□ -2.01
NUP100YKL068W DBP2P24783 546 aaKnown RBP2.49□□□□□ -2.01
NUP100YKL068W YCL049CP25577 312 aa2.49□□□□□ -2.01
NUP100YKL068W SEC65P29478 273 aa2.49□□□□□ -2.01
NUP100YKL068W SWC3P31376 625 aa2.49□□□□□ -2.01
NUP100YKL068W SEC21P32074 935 aaKnown RBP2.49□□□□□ -2.01
NUP100YKL068W ERG3P32353 365 aa2.49□□□□□ -2.01
NUP100YKL068W RPT3P33298 428 aaKnown RBP2.49□□□□□ -2.01
NUP100YKL068W MDL1P33310 695 aa2.49□□□□□ -2.01
NUP100YKL068W RIB7P33312 244 aa2.49□□□□□ -2.01
NUP100YKL068W ADD66P36040 267 aa2.49□□□□□ -2.01
NUP100YKL068W FTH1P38310 465 aa2.49□□□□□ -2.01
NUP100YKL068W NEM1P38757 446 aa2.49□□□□□ -2.01
NUP100YKL068W SFB3P38810 929 aa2.49□□□□□ -2.01
NUP100YKL068W YER010CP40011 234 aa2.49□□□□□ -2.01
NUP100YKL068W RTT105P40063 208 aa2.49□□□□□ -2.01
NUP100YKL068W SCS2P40075 244 aaKnown RBP2.49□□□□□ -2.01
NUP100YKL068W PCL7P40186 285 aa2.49□□□□□ -2.01
NUP100YKL068W YJL068CP40363 299 aa2.49□□□□□ -2.01
NUP100YKL068W UBP7P40453 1071 aa2.49□□□□□ -2.01
NUP100YKL068W HNT2P49775 206 aa2.49□□□□□ -2.01
NUP100YKL068W ALF1P53904 254 aa2.49□□□□□ -2.01
NUP100YKL068W UTP5Q04177 643 aaKnown RBP2.49□□□□□ -2.01
NUP100YKL068W YMR111CQ04461 462 aaPredicted RBP2.49□□□□□ -2.01
NUP100YKL068W YLR345WQ06137 509 aa2.49□□□□□ -2.01
NUP100YKL068W MRN1Q08925 612 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01not detected
NUP100YKL068W KCS1Q12494 1050 aa2.49□□□□□ -2.01
NUP100YKL068W SEN1Q00416 2231 aaKnown RBP2.49□□□□□ -2.01
NUP100YKL068W QCR6P00127 147 aa2.49□□□□□ -2.01
NUP100YKL068W TUF1P02992 437 aaKnown RBP2.49□□□□□ -2.01
NUP100YKL068W LEU2P04173 364 aaPredicted RBP2.49□□□□□ -2.01
NUP100YKL068W CDC4P07834 779 aa2.49□□□□□ -2.01
NUP100YKL068W ADH4P10127 382 aa2.49□□□□□ -2.01
NUP100YKL068W SGF29P25554 259 aa2.49□□□□□ -2.01
NUP100YKL068W XRS2P33301 854 aa2.49□□□□□ -2.01
NUP100YKL068W EMC3P36039 253 aa2.49□□□□□ -2.01
NUP100YKL068W SET3P36124 751 aa2.49□□□□□ -2.01
NUP100YKL068W TFA2P36145 328 aa2.49□□□□□ -2.01
NUP100YKL068W RPN10P38886 268 aaKnown RBP2.49□□□□□ -2.01
NUP100YKL068W FYV8P46949 817 aaKnown RBP2.49□□□□□ -2.01
NUP100YKL068W BIO5P53744 561 aaKnown RBP2.49□□□□□ -2.01
NUP100YKL068W GYL1Q04322 720 aa2.49□□□□□ -2.01
NUP100YKL068W YDR514CQ04408 483 aa2.49□□□□□ -2.01
NUP100YKL068W RNH1Q04740 348 aa2.49□□□□□ -2.01
NUP100YKL068W SNO4Q04902 237 aa2.49□□□□□ -2.01
NUP100YKL068W HSP33Q08914 237 aaKnown RBP2.49□□□□□ -2.01
NUP100YKL068W KEL3Q08979 651 aaPredicted RBP2.49□□□□□ -2.01
NUP100YKL068W HSP32Q08992 237 aa2.49□□□□□ -2.01
NUP100YKL068W ENV7Q12003 364 aa2.49□□□□□ -2.01
NUP100YKL068W GLO4Q12320 285 aa2.49□□□□□ -2.01
NUP100YKL068W NOP56Q12460 504 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01not detected
NUP100YKL068W FRE6Q12473 712 aa2.49□□□□□ -2.01
NUP100YKL068W RRP36Q12481 300 aaPredicted RBP2.49□□□□□ -2.01
NUP100YKL068W MTF2P10849 440 aa2.48□□□□□ -2.01
NUP100YKL068W CBP3P21560 335 aa2.48□□□□□ -2.01
NUP100YKL068W NAM7P30771 971 aaKnown RBP2.48□□□□□ -2.01
NUP100YKL068W NGG1P32494 702 aa2.48□□□□□ -2.01
NUP100YKL068W TFB1P32776 642 aa2.48□□□□□ -2.01
NUP100YKL068W PPQ1P32945 549 aa2.48□□□□□ -2.01
NUP100YKL068W STE13P33894 931 aa2.48□□□□□ -2.01
NUP100YKL068W TAF5P38129 798 aa2.48□□□□□ -2.01
NUP100YKL068W YLF2P38746 405 aa2.48□□□□□ -2.01
NUP100YKL068W YER158CP40095 573 aa2.48□□□□□ -2.01
NUP100YKL068W ALY2P47029 1046 aa2.48□□□□□ -2.01
NUP100YKL068W YJR098CP47139 656 aa2.48□□□□□ -2.01
NUP100YKL068W PPT1P53043 513 aa2.48□□□□□ -2.01
NUP100YKL068W ENV11P53246 860 aa2.48□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 20.9 ms