RNA–Protein interactions for RNA: YJL034W

KAR2, Transcript of ATPase involved in protein import into the ER, yeast

Gene KAR2, Length 2,049 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
KAR2	YJL034W	INP2	Q03824	705 aa		4.92	□□□□□ -1.62
KAR2	YJL034W	YMR027W	Q04371	470 aa		4.92	□□□□□ -1.62
KAR2	YJL034W	THI7	Q05998	598 aa		4.92	□□□□□ -1.62
KAR2	YJL034W	KAP95	Q06142	861 aa	Known RBP	4.92	□□□□□ -1.62
KAR2	YJL034W	YLR455W	Q06188	304 aa		4.92	□□□□□ -1.62
KAR2	YJL034W	YOR059C	Q08448	450 aa	Known RBP	4.92	□□□□□ -1.62
KAR2	YJL034W	FAP7	Q12055	197 aa	Predicted RBP	4.92	□□□□□ -1.62
KAR2	YJL034W	YDR018C	Q12185	396 aa		4.92	□□□□□ -1.62
KAR2	YJL034W	RAD10	P06838	210 aa		4.92	□□□□□ -1.62
KAR2	YJL034W	RPL4A	P10664	362 aa	Known RBP	4.92	□□□□□ -1.62
KAR2	YJL034W	REC107	P21651	314 aa		4.92	□□□□□ -1.62
KAR2	YJL034W	TRX1	P22217	103 aa	Known RBP	4.92	□□□□□ -1.62
KAR2	YJL034W	KAR4	P25583	335 aa		4.92	□□□□□ -1.62
KAR2	YJL034W	MLS1	P30952	554 aa		4.92	□□□□□ -1.62
KAR2	YJL034W	GPT2	P36148	743 aa		4.92	□□□□□ -1.62
KAR2	YJL034W	FLR1	P38124	548 aa		4.92	□□□□□ -1.62
KAR2	YJL034W	DUG2	P38149	878 aa		4.92	□□□□□ -1.62
KAR2	YJL034W	SWC5	P38326	303 aa		4.92	□□□□□ -1.62
KAR2	YJL034W	QNS1	P38795	714 aa	Known RBP	4.92	□□□□□ -1.62
KAR2	YJL034W	GVP36	P40531	326 aa	Known RBP	4.92	□□□□□ -1.62
KAR2	YJL034W	ZAP1	P47043	880 aa		4.92	□□□□□ -1.62
KAR2	YJL034W	RPL4B	P49626	362 aa	Known RBP	4.92	□□□□□ -1.62
KAR2	YJL034W	ALT1	P52893	592 aa		4.92	□□□□□ -1.62
KAR2	YJL034W	ARI1	P53111	347 aa	Known RBP	4.92	□□□□□ -1.62
KAR2	YJL034W	KTR5	P53966	522 aa	Predicted RBP	4.92	□□□□□ -1.62
KAR2	YJL034W	SPC24	Q04477	213 aa		4.92	□□□□□ -1.62
KAR2	YJL034W	CST9	Q06032	482 aa		4.92	□□□□□ -1.62
KAR2	YJL034W	VHS3	Q08438	674 aa		4.92	□□□□□ -1.62
KAR2	YJL034W	NOB1	Q08444	459 aa	Known RBP	4.92	□□□□□ -1.62
KAR2	YJL034W	MPC54	Q08550	464 aa		4.92	□□□□□ -1.62
KAR2	YJL034W	CMD1	P06787	147 aa	Known RBP	4.91	□□□□□ -1.62
KAR2	YJL034W	SNA3	P14359	133 aa		4.91	□□□□□ -1.62
KAR2	YJL034W	PUT4	P15380	627 aa		4.91	□□□□□ -1.62
KAR2	YJL034W	RPC19	P28000	142 aa	Known RBP	4.91	□□□□□ -1.62
KAR2	YJL034W	SEC1	P30619	724 aa	Known RBP	4.91	□□□□□ -1.62
KAR2	YJL034W	TPS2	P31688	896 aa	Known RBP	4.91	□□□□□ -1.62
KAR2	YJL034W	MVD1	P32377	396 aa	Known RBP	4.91	□□□□□ -1.62
KAR2	YJL034W	MRP4	P32902	394 aa		4.91	□□□□□ -1.62
KAR2	YJL034W	YKR023W	P36119	530 aa	Known RBP	4.91	□□□□□ -1.62
KAR2	YJL034W	KSP1	P38691	1029 aa	Known RBP	4.91	□□□□□ -1.62
KAR2	YJL034W	BEM4	P39011	633 aa		4.91	□□□□□ -1.62
KAR2	YJL034W	NUP60	P39705	539 aa		4.91	□□□□□ -1.62
KAR2	YJL034W	SCS2	P40075	244 aa	Known RBP	4.91	□□□□□ -1.62
KAR2	YJL034W	TDA10	P42938	290 aa		4.91	□□□□□ -1.62
KAR2	YJL034W	SCS3	P53012	380 aa		4.91	□□□□□ -1.62
KAR2	YJL034W	SUB1	P54000	292 aa	Known RBP	4.91	□□□□□ -1.62
KAR2	YJL034W	CWC21	Q03375	135 aa	Known RBP	4.91	□□□□□ -1.62
KAR2	YJL034W	CDC73	Q06697	393 aa		4.91	□□□□□ -1.62
KAR2	YJL034W	YLL054C	Q12244	843 aa		4.91	□□□□□ -1.62
KAR2	YJL034W	RRD2	Q12461	358 aa		4.91	□□□□□ -1.62
KAR2	YJL034W	RIF1	P29539	1916 aa		4.91	□□□□□ -1.62
KAR2	YJL034W	GLN3	P18494	730 aa		4.9	□□□□□ -1.62
KAR2	YJL034W	SLY1	P22213	666 aa		4.9	□□□□□ -1.62
KAR2	YJL034W	MGT1	P26188	188 aa		4.9	□□□□□ -1.62
KAR2	YJL034W	PRR1	P28708	518 aa		4.9	□□□□□ -1.62
KAR2	YJL034W	MSS51	P32335	436 aa		4.9	□□□□□ -1.62
KAR2	YJL034W	CDC3	P32457	520 aa	Known RBP	4.9	□□□□□ -1.62
KAR2	YJL034W	NIP1	P32497	812 aa	Known RBP	4.9	□□□□□ -1.62
KAR2	YJL034W	SET3	P36124	751 aa		4.9	□□□□□ -1.62
KAR2	YJL034W	APE3	P37302	537 aa	Known RBP	4.9	□□□□□ -1.62
KAR2	YJL034W	MSR1	P38714	643 aa		4.9	□□□□□ -1.62
KAR2	YJL034W	SPC97	P38863	823 aa		4.9	□□□□□ -1.62
KAR2	YJL034W	SAW1	P39735	261 aa		4.9	□□□□□ -1.62
KAR2	YJL034W	SEC27	P41811	889 aa	Known RBP	4.9	□□□□□ -1.62
KAR2	YJL034W	ULI1	P43604	169 aa		4.9	□□□□□ -1.62
KAR2	YJL034W	YJR054W	P47114	497 aa		4.9	□□□□□ -1.62
KAR2	YJL034W	ISM1	P48526	1002 aa		4.9	□□□□□ -1.62
KAR2	YJL034W	MSC2	Q03455	724 aa		4.9	□□□□□ -1.62
KAR2	YJL034W	AIM39	Q08223	395 aa		4.9	□□□□□ -1.62
KAR2	YJL034W	TRE1	Q08919	783 aa		4.9	□□□□□ -1.62
KAR2	YJL034W	YPR027C	Q12079	277 aa		4.9	□□□□□ -1.62
KAR2	YJL034W	COX4	P04037	155 aa		4.9	□□□□□ -1.63
KAR2	YJL034W	CDC24	P11433	854 aa	Predicted RBP	4.9	□□□□□ -1.63
KAR2	YJL034W	TYR1	P20049	452 aa		4.9	□□□□□ -1.63
KAR2	YJL034W	ADE2	P21264	571 aa	Known RBP	4.9	□□□□□ -1.63
KAR2	YJL034W	PTC3	P34221	468 aa	Known RBP	4.9	□□□□□ -1.63
KAR2	YJL034W	KES1	P35844	434 aa	Known RBP	4.9	□□□□□ -1.63
KAR2	YJL034W	ALA1	P40825	983 aa	Known RBP	4.9	□□□□□ -1.63
KAR2	YJL034W	MDJ2	P42834	146 aa		4.9	□□□□□ -1.63
KAR2	YJL034W	YJL045W	P47052	634 aa		4.9	□□□□□ -1.63
KAR2	YJL034W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.63	not detected
KAR2	YJL034W	ALG11	P53954	548 aa	Known RBP	4.9	□□□□□ -1.63
KAR2	YJL034W	YNL040W	P53960	456 aa	Predicted RBP	4.9	□□□□□ -1.63
KAR2	YJL034W	CDC55	Q00362	526 aa		4.9	□□□□□ -1.63
KAR2	YJL034W	VPS16	Q03308	798 aa		4.9	□□□□□ -1.63
KAR2	YJL034W	MZM1	Q03429	123 aa	Predicted RBP	4.9	□□□□□ -1.63
KAR2	YJL034W	TDA5	Q06417	326 aa	Known RBP	4.9	□□□□□ -1.63
KAR2	YJL034W	YRR1	Q12172	810 aa		4.9	□□□□□ -1.63
KAR2	YJL034W	ENO2	P00925	437 aa	Known RBP	4.89	□□□□□ -1.63
KAR2	YJL034W	SBP1	P10080	294 aa	Known RBP	4.89	□□□□□ -1.63
KAR2	YJL034W	VBA3	P25594	458 aa		4.89	□□□□□ -1.63
KAR2	YJL034W	MEI4	P29467	408 aa		4.89	□□□□□ -1.63
KAR2	YJL034W	SSE1	P32589	693 aa	Known RBP	4.89	□□□□□ -1.63
KAR2	YJL034W	BCS1	P32839	456 aa		4.89	□□□□□ -1.63
KAR2	YJL034W	RPT1	P33299	467 aa	Known RBP	4.89	□□□□□ -1.63
KAR2	YJL034W	VBA5	P36172	582 aa		4.89	□□□□□ -1.63
KAR2	YJL034W	YBL036C	P38197	257 aa		4.89	□□□□□ -1.63
KAR2	YJL034W	LIN1	P38852	340 aa	Predicted RBP	4.89	□□□□□ -1.63
KAR2	YJL034W	GEM1	P39722	662 aa		4.89	□□□□□ -1.63
KAR2	YJL034W	GCN20	P43535	752 aa	Known RBP	4.89	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms