RNA–Protein interactions for RNA: YIL123W

SIM1, Transcript of Protein of the SUN family (Sim1p, Uth1p, Nca3p, Sun4p), yeastyeast

Gene SIM1, Length 1,431 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIM1YIL123W MSH6Q03834 1242 aa11.69□□□□□ -0.54
SIM1YIL123W FMP25Q08023 583 aa11.69□□□□□ -0.54
SIM1YIL123W AVL9Q12500 764 aa11.69□□□□□ -0.54
SIM1YIL123W TPK1P06244 397 aa11.69□□□□□ -0.54
SIM1YIL123W ILV2P07342 687 aaKnown RBP11.69□□□□□ -0.54
SIM1YIL123W FUB1P25659 250 aa11.69□□□□□ -0.54
SIM1YIL123W SAW1P39735 261 aa11.69□□□□□ -0.54
SIM1YIL123W POL31P46957 487 aa11.69□□□□□ -0.54
SIM1YIL123W ZIP2P53061 704 aa11.69□□□□□ -0.54
SIM1YIL123W ULP1Q02724 621 aa11.69□□□□□ -0.54
SIM1YIL123W TAF9Q05027 157 aa11.69□□□□□ -0.54
SIM1YIL123W FAR8Q05040 523 aa11.69□□□□□ -0.54
SIM1YIL123W MAM3Q12296 706 aa11.69□□□□□ -0.54
SIM1YIL123W CMD1P06787 147 aaKnown RBP11.68□□□□□ -0.54
SIM1YIL123W TIF1P10081 395 aaKnown RBP11.68□□□□□ -0.54
SIM1YIL123W MRPL25P23369 157 aa11.68□□□□□ -0.54
SIM1YIL123W BIO2P32451 375 aa11.68□□□□□ -0.54
SIM1YIL123W PEX2P32800 271 aa11.68□□□□□ -0.54
SIM1YIL123W PTC3P34221 468 aaKnown RBP11.68□□□□□ -0.54
SIM1YIL123W SQT1P35184 431 aa11.68□□□□□ -0.54
SIM1YIL123W HEL1P36113 551 aa11.68□□□□□ -0.54
SIM1YIL123W MSR1P38714 643 aa11.68□□□□□ -0.54
SIM1YIL123W DSN1P40568 576 aa11.68□□□□□ -0.54
SIM1YIL123W SAE2P46946 345 aa11.68□□□□□ -0.54
SIM1YIL123W ALY2P47029 1046 aa11.68□□□□□ -0.54
SIM1YIL123W YMR102CQ03177 834 aa11.68□□□□□ -0.54
SIM1YIL123W LDB19Q12502 818 aa11.68□□□□□ -0.54
SIM1YIL123W SRV2P17555 526 aaKnown RBP11.67□□□□□ -0.54
SIM1YIL123W LRE1P25579 583 aaKnown RBP11.67□□□□□ -0.54
SIM1YIL123W YCR015CP25616 317 aa11.67□□□□□ -0.54
SIM1YIL123W LOS1P33418 1100 aaPredicted RBP11.67□□□□□ -0.54
SIM1YIL123W SHE3P38272 425 aaKnown RBP11.67□□□□□ -0.54
SIM1YIL123W PFD1P46988 109 aa11.67□□□□□ -0.54
SIM1YIL123W APC5Q08683 685 aa11.67□□□□□ -0.54
SIM1YIL123W THI21Q08975 551 aa11.67□□□□□ -0.54
SIM1YIL123W HEM1P09950 548 aaPredicted RBP11.66□□□□□ -0.54
SIM1YIL123W KAR4P25583 335 aa11.66□□□□□ -0.54
SIM1YIL123W CSE2P33308 149 aa11.66□□□□□ -0.54
SIM1YIL123W YSW1P38280 609 aa11.66□□□□□ -0.54
SIM1YIL123W AVT2P39981 480 aa11.66□□□□□ -0.54
SIM1YIL123W ALA1P40825 983 aaKnown RBP11.66□□□□□ -0.54
SIM1YIL123W YGR283CP53336 341 aaPredicted RBP11.66□□□□□ -0.54
SIM1YIL123W RCR2Q03446 210 aaKnown RBP11.66□□□□□ -0.54
SIM1YIL123W TAF10Q12030 206 aa11.66□□□□□ -0.54
SIM1YIL123W GAL80P04387 435 aa11.65□□□□□ -0.54
SIM1YIL123W SET3P36124 751 aa11.65□□□□□ -0.54
SIM1YIL123W HSL7P38274 827 aa11.65□□□□□ -0.54
SIM1YIL123W ESL1P40456 1118 aa11.65□□□□□ -0.54
SIM1YIL123W YPL062WQ02781 134 aa11.65□□□□□ -0.54
SIM1YIL123W RKM2Q03942 479 aa11.65□□□□□ -0.54
SIM1YIL123W TDA5Q06417 326 aaKnown RBP11.65□□□□□ -0.54
SIM1YIL123W IZH4Q99393 312 aa11.65□□□□□ -0.54
SIM1YIL123W IMA3P0CW40 589 aa11.64□□□□□ -0.55
SIM1YIL123W IMA4P0CW41 589 aa11.64□□□□□ -0.55
SIM1YIL123W KIP2P28743 706 aa11.64□□□□□ -0.55
SIM1YIL123W PAM1P37304 830 aaKnown RBP11.64□□□□□ -0.55
SIM1YIL123W APN2P38207 520 aa11.64□□□□□ -0.55
SIM1YIL123W DIA4P38705 446 aaPredicted RBP11.64□□□□□ -0.55
SIM1YIL123W SPC97P38863 823 aa11.64□□□□□ -0.55
SIM1YIL123W VPS62P53285 467 aa11.64□□□□□ -0.55
SIM1YIL123W SPC98P53540 846 aa11.64□□□□□ -0.55
SIM1YIL123W YML119WQ03208 357 aa11.64□□□□□ -0.55
SIM1YIL123W TPO1Q07824 586 aa11.64□□□□□ -0.55
SIM1YIL123W THI20Q08224 551 aa11.64□□□□□ -0.55
SIM1YIL123W SDH5Q08230 162 aa11.64□□□□□ -0.55
SIM1YIL123W IMA2Q08295 589 aa11.64□□□□□ -0.55
SIM1YIL123W YOL087CQ99247 1116 aa11.64□□□□□ -0.55
SIM1YIL123W ILS1P09436 1072 aaKnown RBP11.63□□□□□ -0.55
SIM1YIL123W SLA2P33338 968 aa11.63□□□□□ -0.55
SIM1YIL123W UIP5P36137 443 aa11.63□□□□□ -0.55
SIM1YIL123W CKB2P38930 258 aa11.63□□□□□ -0.55
SIM1YIL123W RFX1P48743 811 aa11.63□□□□□ -0.55
SIM1YIL123W RTA1P53047 317 aa11.63□□□□□ -0.55
SIM1YIL123W YLL056CQ12177 298 aa11.63□□□□□ -0.55
SIM1YIL123W REC8Q12188 680 aa11.63□□□□□ -0.55
SIM1YIL123W POT1P27796 417 aaKnown RBP RIP-Chip data11.62□□□□□ -0.55not detected
SIM1YIL123W HXT3P32466 567 aaKnown RBP11.62□□□□□ -0.55
SIM1YIL123W PAH1P32567 862 aa11.62□□□□□ -0.55
SIM1YIL123W NMD3P38861 518 aaKnown RBP11.62□□□□□ -0.55
SIM1YIL123W SCC4P40090 624 aa11.62□□□□□ -0.55
SIM1YIL123W SIP5P40210 489 aaKnown RBP11.62□□□□□ -0.55
SIM1YIL123W MND2P40577 368 aa11.62□□□□□ -0.55
SIM1YIL123W KTR5P53966 522 aaPredicted RBP11.62□□□□□ -0.55
SIM1YIL123W YNL011CP53980 444 aa11.62□□□□□ -0.55
SIM1YIL123W YDL073WQ07454 984 aa11.62□□□□□ -0.55
SIM1YIL123W RCL1Q08096 367 aaPredicted RBP11.62□□□□□ -0.55
SIM1YIL123W ESC8Q08119 714 aa11.62□□□□□ -0.55
SIM1YIL123W YDR524C-BQ3E6R4 66 aa11.62□□□□□ -0.55
SIM1YIL123W URA7P28274 579 aaKnown RBP11.61□□□□□ -0.55
SIM1YIL123W AIM18P38884 321 aa11.61□□□□□ -0.55
SIM1YIL123W MRX1P40050 688 aa11.61□□□□□ -0.55
SIM1YIL123W TDA10P42938 290 aa11.61□□□□□ -0.55
SIM1YIL123W PCL10P53124 433 aa11.61□□□□□ -0.55
SIM1YIL123W PEX31P53203 462 aa11.61□□□□□ -0.55
SIM1YIL123W TKL2P33315 681 aa11.6□□□□□ -0.55
SIM1YIL123W SMF2P38778 549 aa11.6□□□□□ -0.55
SIM1YIL123W RAD55P38953 406 aa11.6□□□□□ -0.55
SIM1YIL123W YGR035CP53222 116 aa11.6□□□□□ -0.55
SIM1YIL123W LSC1P53598 329 aaKnown RBP11.6□□□□□ -0.55
SIM1YIL123W SKY1Q03656 742 aa11.6□□□□□ -0.55
Retrieved 100 of 5,963 RNA–protein pairs in 58.6 ms