RNA–Protein interactions for RNA: YHR108W

GGA2, Transcript of Protein that regulates Arf1p, Arf2p to facilitate Golgi trafficking, yeastyeast

Gene GGA2, Length 1,758 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GGA2YHR108W SHE9Q04172 456 aa8.56□□□□□ -1.04
GGA2YHR108W ICL2Q12031 575 aa8.56□□□□□ -1.04
GGA2YHR108W CTF3Q12748 733 aa8.56□□□□□ -1.04
GGA2YHR108W RTP1Q12751 981 aa8.56□□□□□ -1.04
GGA2YHR108W ARG1P22768 420 aa8.55□□□□□ -1.04
GGA2YHR108W DBP1P24784 617 aaKnown RBP8.55□□□□□ -1.04
GGA2YHR108W URA7P28274 579 aaKnown RBP8.55□□□□□ -1.04
GGA2YHR108W KDX1P36005 433 aa8.55□□□□□ -1.04
GGA2YHR108W SMF2P38778 549 aa8.55□□□□□ -1.04
GGA2YHR108W LYS9P38999 446 aa8.55□□□□□ -1.04
GGA2YHR108W SCC4P40090 624 aa8.55□□□□□ -1.04
GGA2YHR108W ALY2P47029 1046 aa8.55□□□□□ -1.04
GGA2YHR108W PCL10P53124 433 aa8.55□□□□□ -1.04
GGA2YHR108W TDA5Q06417 326 aaKnown RBP8.55□□□□□ -1.04
GGA2YHR108W THI21Q08975 551 aa8.55□□□□□ -1.04
GGA2YHR108W ARD1P07347 238 aaPredicted RBP8.54□□□□□ -1.04
GGA2YHR108W PRP4P20053 465 aaKnown RBP8.54□□□□□ -1.04
GGA2YHR108W MRE11P32829 692 aa8.54□□□□□ -1.04
GGA2YHR108W AGP2P38090 596 aa8.54□□□□□ -1.04
GGA2YHR108W CKB2P38930 258 aa8.54□□□□□ -1.04
GGA2YHR108W ASG7P46993 209 aa8.54□□□□□ -1.04
GGA2YHR108W YNL134CP53912 376 aaKnown RBP8.54□□□□□ -1.04
GGA2YHR108W ELP3Q02908 557 aaKnown RBP8.54□□□□□ -1.04
GGA2YHR108W SPC24Q04477 213 aa8.54□□□□□ -1.04
GGA2YHR108W DIS3Q08162 1001 aaKnown RBP8.54□□□□□ -1.04
GGA2YHR108W VPS54Q12071 889 aa8.54□□□□□ -1.04
GGA2YHR108W YLL056CQ12177 298 aa8.54□□□□□ -1.04
GGA2YHR108W AVL9Q12500 764 aa8.54□□□□□ -1.04
GGA2YHR108W LRE1P25579 583 aaKnown RBP8.53□□□□□ -1.04
GGA2YHR108W ABZ1P37254 787 aaPredicted RBP8.53□□□□□ -1.04
GGA2YHR108W DIA4P38705 446 aaPredicted RBP8.53□□□□□ -1.04
GGA2YHR108W LIN1P38852 340 aaPredicted RBP8.53□□□□□ -1.04
GGA2YHR108W YAP1801P38856 637 aa8.53□□□□□ -1.04
GGA2YHR108W DSE1P40077 573 aa8.53□□□□□ -1.04
GGA2YHR108W GTR1Q00582 310 aa8.53□□□□□ -1.04
GGA2YHR108W MUB1Q03162 620 aa8.53□□□□□ -1.04
GGA2YHR108W TIF35Q04067 274 aaKnown RBP8.53□□□□□ -1.04
GGA2YHR108W IMA3P0CW40 589 aa8.53□□□□□ -1.04
GGA2YHR108W IMA4P0CW41 589 aa8.53□□□□□ -1.04
GGA2YHR108W BAS1P22035 811 aa8.53□□□□□ -1.04
GGA2YHR108W VPS3P23643 1011 aa8.53□□□□□ -1.04
GGA2YHR108W PDB1P32473 366 aaKnown RBP8.53□□□□□ -1.04
GGA2YHR108W FRE1P32791 686 aa8.53□□□□□ -1.04
GGA2YHR108W APN2P38207 520 aa8.53□□□□□ -1.04
GGA2YHR108W YBR032WP38223 100 aa8.53□□□□□ -1.04
GGA2YHR108W YBP1P38315 674 aa8.53□□□□□ -1.04
GGA2YHR108W PFD1P46988 109 aa8.53□□□□□ -1.04
GGA2YHR108W YJR107WP47145 328 aa8.53□□□□□ -1.04
GGA2YHR108W TAF6P53040 516 aa8.53□□□□□ -1.04
GGA2YHR108W YGR283CP53336 341 aaPredicted RBP8.53□□□□□ -1.04
GGA2YHR108W MUK1Q02866 612 aa8.53□□□□□ -1.04
GGA2YHR108W TPO1Q07824 586 aa8.53□□□□□ -1.04
GGA2YHR108W THI20Q08224 551 aa8.53□□□□□ -1.04
GGA2YHR108W IMA2Q08295 589 aa8.53□□□□□ -1.04
GGA2YHR108W SSC1P0CS90 654 aaKnown RBP8.52□□□□□ -1.05
GGA2YHR108W DUR3P33413 735 aa8.52□□□□□ -1.05
GGA2YHR108W HSM3P38348 480 aa8.52□□□□□ -1.05
GGA2YHR108W AVT2P39981 480 aa8.52□□□□□ -1.05
GGA2YHR108W EMW1P42842 904 aaKnown RBP8.52□□□□□ -1.05
GGA2YHR108W LIA1P47120 325 aaKnown RBP8.52□□□□□ -1.05
GGA2YHR108W LSC1P53598 329 aaKnown RBP8.52□□□□□ -1.05
GGA2YHR108W ADE13Q05911 482 aaKnown RBP8.52□□□□□ -1.05
GGA2YHR108W DNL4Q08387 944 aaPredicted RBP8.52□□□□□ -1.05
GGA2YHR108W RIF1P29539 1916 aa8.52□□□□□ -1.05
GGA2YHR108W TIF1P10081 395 aaKnown RBP8.51□□□□□ -1.05
GGA2YHR108W RNA1P11745 407 aaKnown RBP8.51□□□□□ -1.05
GGA2YHR108W GAL11P19659 1081 aa8.51□□□□□ -1.05
GGA2YHR108W YCR015CP25616 317 aa8.51□□□□□ -1.05
GGA2YHR108W DRE2P36152 348 aa8.51□□□□□ -1.05
GGA2YHR108W SHE3P38272 425 aaKnown RBP8.51□□□□□ -1.05
GGA2YHR108W HSL7P38274 827 aa8.51□□□□□ -1.05
GGA2YHR108W ALD5P40047 520 aaKnown RBP8.51□□□□□ -1.05
GGA2YHR108W TMA22P47089 198 aaPredicted RBP8.51□□□□□ -1.05
GGA2YHR108W ALT2P52892 507 aa8.51□□□□□ -1.05
GGA2YHR108W BRE5P53741 515 aaKnown RBP8.51□□□□□ -1.05
GGA2YHR108W YLR053CQ12026 108 aa8.51□□□□□ -1.05
GGA2YHR108W TIF6Q12522 245 aaKnown RBP8.51□□□□□ -1.05
GGA2YHR108W IZH4Q99393 312 aa8.51□□□□□ -1.05
GGA2YHR108W RAD5P32849 1169 aaPredicted RBP8.5□□□□□ -1.05
GGA2YHR108W ETR1P38071 380 aa8.5□□□□□ -1.05
GGA2YHR108W MND2P40577 368 aa8.5□□□□□ -1.05
GGA2YHR108W YNL035CP53962 389 aaKnown RBP8.5□□□□□ -1.05
GGA2YHR108W YDL073WQ07454 984 aa8.5□□□□□ -1.05
GGA2YHR108W APC5Q08683 685 aa8.5□□□□□ -1.05
GGA2YHR108W GPM3Q12326 303 aa8.5□□□□□ -1.05
GGA2YHR108W RSA4P25382 515 aaKnown RBP8.5□□□□□ -1.05
GGA2YHR108W GAC1P28006 793 aa8.5□□□□□ -1.05
GGA2YHR108W CYS3P31373 394 aaKnown RBP8.5□□□□□ -1.05
GGA2YHR108W RFX1P48743 811 aa8.5□□□□□ -1.05
GGA2YHR108W STB4P50104 949 aa8.5□□□□□ -1.05
GGA2YHR108W UBX4P54730 416 aa8.5□□□□□ -1.05
GGA2YHR108W BET4Q00618 327 aa8.5□□□□□ -1.05
GGA2YHR108W SND1Q04007 877 aa8.5□□□□□ -1.05
GGA2YHR108W MAG2Q06436 670 aaKnown RBP8.5□□□□□ -1.05
GGA2YHR108W YET3Q07451 203 aa8.5□□□□□ -1.05
GGA2YHR108W AAD3P25612 363 aa8.49□□□□□ -1.05
GGA2YHR108W CDC20P26309 610 aa8.49□□□□□ -1.05
GGA2YHR108W MVD1P32377 396 aaKnown RBP8.49□□□□□ -1.05
GGA2YHR108W HXT3P32466 567 aaKnown RBP8.49□□□□□ -1.05
GGA2YHR108W COY1P34237 679 aa8.49□□□□□ -1.05
Retrieved 100 of 5,963 RNA–protein pairs in 8.3 ms