RNA–Protein interactions for RNA: YGR156W

PTI1, Transcript of Essential component of CPF (cleavage and polyadenylation factor), yeast

Gene PTI1, Length 1,278 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PTI1	YGR156W	LTP1	P40347	161 aa		4.27	□□□□□ -1.73
PTI1	YGR156W	NET1	P47035	1189 aa		4.27	□□□□□ -1.73
PTI1	YGR156W	BNA3	P47039	444 aa	Known RBP	4.27	□□□□□ -1.73
PTI1	YGR156W	HFI1	Q12060	488 aa		4.27	□□□□□ -1.73
PTI1	YGR156W	YLR149C	Q99296	730 aa		4.27	□□□□□ -1.73
PTI1	YGR156W	MPD2	Q99316	277 aa		4.27	□□□□□ -1.73
PTI1	YGR156W	CHD1	P32657	1468 aa		4.26	□□□□□ -1.73
PTI1	YGR156W	UFD4	P33202	1483 aa		4.26	□□□□□ -1.73
PTI1	YGR156W	ADE5,7	P07244	802 aa	Known RBP	4.26	□□□□□ -1.73
PTI1	YGR156W	DAL3	P32459	195 aa		4.26	□□□□□ -1.73
PTI1	YGR156W	PIP2	P52960	996 aa		4.26	□□□□□ -1.73
PTI1	YGR156W	COX18	P53239	316 aa		4.26	□□□□□ -1.73
PTI1	YGR156W	MET14	Q02196	202 aa		4.26	□□□□□ -1.73
PTI1	YGR156W	FMP30	Q02883	468 aa		4.26	□□□□□ -1.73
PTI1	YGR156W	CEF1	Q03654	590 aa	Predicted RBP	4.26	□□□□□ -1.73
PTI1	YGR156W	GEA2	P39993	1459 aa	Known RBP	4.25	□□□□□ -1.73
PTI1	YGR156W	YPK9	Q12697	1472 aa		4.25	□□□□□ -1.73
PTI1	YGR156W	YKR018C	P36114	725 aa		4.25	□□□□□ -1.73
PTI1	YGR156W	GET2	P40056	285 aa		4.25	□□□□□ -1.73
PTI1	YGR156W	YGR151C	P53287	111 aa		4.25	□□□□□ -1.73
PTI1	YGR156W	BUD21	Q08492	214 aa	Predicted RBP	4.25	□□□□□ -1.73
PTI1	YGR156W	DCS2	Q12123	353 aa		4.25	□□□□□ -1.73
PTI1	YGR156W	RRP6	Q12149	733 aa	Known RBP	4.25	□□□□□ -1.73
PTI1	YGR156W	PGK1	P00560	416 aa	Known RBP	4.24	□□□□□ -1.73
PTI1	YGR156W	GAL1	P04385	528 aa		4.24	□□□□□ -1.73
PTI1	YGR156W	RPS21A	P0C0V8	87 aa	Known RBP	4.24	□□□□□ -1.73
PTI1	YGR156W	STE12	P13574	688 aa		4.24	□□□□□ -1.73
PTI1	YGR156W	NUP1	P20676	1076 aa		4.24	□□□□□ -1.73
PTI1	YGR156W	PRP28	P23394	588 aa		4.24	□□□□□ -1.73
PTI1	YGR156W	SAT4	P25333	603 aa	Known RBP	4.24	□□□□□ -1.73
PTI1	YGR156W	SET3	P36124	751 aa		4.24	□□□□□ -1.73
PTI1	YGR156W	YKR051W	P36142	418 aa		4.24	□□□□□ -1.73
PTI1	YGR156W	BIT2	P38346	545 aa		4.24	□□□□□ -1.73
PTI1	YGR156W	PIG2	P40187	538 aa		4.24	□□□□□ -1.73
PTI1	YGR156W	XBP1	P40489	647 aa		4.24	□□□□□ -1.73
PTI1	YGR156W	RSC8	P43609	557 aa	Known RBP	4.24	□□□□□ -1.73
PTI1	YGR156W	YGR153W	P48238	217 aa		4.24	□□□□□ -1.73
PTI1	YGR156W	YGR021W	P53212	290 aa		4.24	□□□□□ -1.73
PTI1	YGR156W	UBX4	P54730	416 aa		4.24	□□□□□ -1.73
PTI1	YGR156W	VMS1	Q04311	632 aa	Known RBP	4.24	□□□□□ -1.73
PTI1	YGR156W	RPN7	Q06103	429 aa	Known RBP	4.24	□□□□□ -1.73
PTI1	YGR156W	RMP1	Q12530	201 aa		4.24	□□□□□ -1.73
PTI1	YGR156W	Q0142	Q9ZZW4	58 aa		4.24	□□□□□ -1.73
PTI1	YGR156W	RPO31	P04051	1460 aa		4.24	□□□□□ -1.73
PTI1	YGR156W	CDC25	P04821	1589 aa		4.23	□□□□□ -1.73
PTI1	YGR156W	SSN2	P38931	1420 aa		4.23	□□□□□ -1.73
PTI1	YGR156W	KAR1	P11927	433 aa		4.23	□□□□□ -1.73
PTI1	YGR156W	PGI1	P12709	554 aa	Known RBP	4.23	□□□□□ -1.73
PTI1	YGR156W	UGP1	P32861	499 aa	Known RBP	4.23	□□□□□ -1.73
PTI1	YGR156W	OAF3	P36023	863 aa		4.23	□□□□□ -1.73
PTI1	YGR156W	SCS3	P53012	380 aa		4.23	□□□□□ -1.73
PTI1	YGR156W	SVL3	Q03088	825 aa	Known RBP	4.23	□□□□□ -1.73
PTI1	YGR156W	SKY1	Q03656	742 aa		4.23	□□□□□ -1.73
PTI1	YGR156W	RGC1	Q06108	1083 aa	Known RBP	4.23	□□□□□ -1.73
PTI1	YGR156W	RPS21B	Q3E754	87 aa	Known RBP	4.23	□□□□□ -1.73
PTI1	YGR156W	TRX2	P22803	104 aa	Known RBP	4.22	□□□□□ -1.73
PTI1	YGR156W	PTP2	P29461	750 aa		4.22	□□□□□ -1.73
PTI1	YGR156W	BCS1	P32839	456 aa		4.22	□□□□□ -1.73
PTI1	YGR156W	SER1	P33330	395 aa	Known RBP	4.22	□□□□□ -1.73
PTI1	YGR156W	NIC96	P34077	839 aa		4.22	□□□□□ -1.73
PTI1	YGR156W	TDA3	P38758	523 aa		4.22	□□□□□ -1.73
PTI1	YGR156W	BEM4	P39011	633 aa		4.22	□□□□□ -1.73
PTI1	YGR156W	DOT6	P40059	670 aa	Known RBP	4.22	□□□□□ -1.73
PTI1	YGR156W	EMP65	P40085	556 aa		4.22	□□□□□ -1.73
PTI1	YGR156W	NOP9	P47077	666 aa	Known RBP	4.22	□□□□□ -1.73
PTI1	YGR156W	YJR039W	P47107	1121 aa		4.22	□□□□□ -1.73
PTI1	YGR156W	ARP4	P80428	489 aa		4.22	□□□□□ -1.73
PTI1	YGR156W	ATG16	Q03818	150 aa		4.22	□□□□□ -1.73
PTI1	YGR156W	HMO1	Q03973	246 aa	Known RBP	4.22	□□□□□ -1.73
PTI1	YGR156W	MLC2	Q06580	163 aa		4.22	□□□□□ -1.73
PTI1	YGR156W	YDL086W	Q07505	273 aa		4.22	□□□□□ -1.73
PTI1	YGR156W	BMS1	Q08965	1183 aa	Known RBP	4.22	□□□□□ -1.73
PTI1	YGR156W	RGT2	Q12300	763 aa		4.22	□□□□□ -1.73
PTI1	YGR156W	RKR1	Q04781	1562 aa		4.22	□□□□□ -1.73
PTI1	YGR156W	SWI6	P09959	803 aa		4.21	□□□□□ -1.74
PTI1	YGR156W	MNN4	P36044	1178 aa		4.21	□□□□□ -1.74
PTI1	YGR156W	APL3	P38065	1025 aa		4.21	□□□□□ -1.74
PTI1	YGR156W	YMC2	P38087	329 aa		4.21	□□□□□ -1.74
PTI1	YGR156W	MAL31	P38156	614 aa		4.21	□□□□□ -1.74
PTI1	YGR156W	FAT1	P38225	669 aa		4.21	□□□□□ -1.74
PTI1	YGR156W	KSP1	P38691	1029 aa	Known RBP	4.21	□□□□□ -1.74
PTI1	YGR156W	SSZ1	P38788	538 aa	Known RBP	4.21	□□□□□ -1.74
PTI1	YGR156W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
PTI1	YGR156W	PCL10	P53124	433 aa		4.21	□□□□□ -1.74
PTI1	YGR156W	SLD3	P53135	668 aa		4.21	□□□□□ -1.74
PTI1	YGR156W	SPC105	P53148	917 aa		4.21	□□□□□ -1.74
PTI1	YGR156W	BRE5	P53741	515 aa	Known RBP	4.21	□□□□□ -1.74
PTI1	YGR156W	VPS72	Q03388	795 aa		4.21	□□□□□ -1.74
PTI1	YGR156W	PHM6	Q05637	104 aa		4.21	□□□□□ -1.74
PTI1	YGR156W	NYV1	Q12255	253 aa		4.21	□□□□□ -1.74
PTI1	YGR156W	PAN1	P32521	1480 aa		4.21	□□□□□ -1.74
PTI1	YGR156W	SCC2	Q04002	1493 aa		4.21	□□□□□ -1.74
PTI1	YGR156W	DNF1	P32660	1571 aa		4.21	□□□□□ -1.74
PTI1	YGR156W	RPA190	P10964	1664 aa	Known RBP	4.21	□□□□□ -1.74
PTI1	YGR156W	ESC1	Q03661	1658 aa	Known RBP	4.2	□□□□□ -1.74
PTI1	YGR156W	COX11	P19516	300 aa	Known RBP	4.2	□□□□□ -1.74
PTI1	YGR156W	GID8	P40208	455 aa		4.2	□□□□□ -1.74
PTI1	YGR156W	CNM67	P53865	581 aa	Known RBP	4.2	□□□□□ -1.74
PTI1	YGR156W	YDL121C	Q07541	149 aa		4.2	□□□□□ -1.74
PTI1	YGR156W	PEX15	Q08215	383 aa		4.2	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 40.9 ms