RNA–Protein interactions for RNA: YGR013W

SNU71, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU71, Length 1,863 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU71YGR013W POL3P15436 1097 aa7.21□□□□□ -1.25
SNU71YGR013W NPL6P32832 435 aa7.21□□□□□ -1.25
SNU71YGR013W SET3P36124 751 aa7.21□□□□□ -1.25
SNU71YGR013W GLY1P37303 387 aaKnown RBP7.21□□□□□ -1.25
SNU71YGR013W RMD8P43620 662 aa7.21□□□□□ -1.25
SNU71YGR013W YLR346CQ06139 101 aa7.21□□□□□ -1.25
SNU71YGR013W YPS7Q06325 596 aa7.21□□□□□ -1.25
SNU71YGR013W CSR1Q06705 408 aaKnown RBP7.21□□□□□ -1.25
SNU71YGR013W DNF2Q12675 1612 aa7.21□□□□□ -1.25
SNU71YGR013W GDB1Q06625 1536 aa7.21□□□□□ -1.26
SNU71YGR013W YML6P51998 286 aa7.21□□□□□ -1.26
SNU71YGR013W ALT1P52893 592 aa7.21□□□□□ -1.26
SNU71YGR013W ARE2P53629 642 aaKnown RBP7.21□□□□□ -1.26
SNU71YGR013W SNO4Q04902 237 aa7.21□□□□□ -1.26
SNU71YGR013W HSP33Q08914 237 aaKnown RBP7.21□□□□□ -1.26
SNU71YGR013W HSP32Q08992 237 aa7.21□□□□□ -1.26
SNU71YGR013W DBP10Q12389 995 aaKnown RBP7.21□□□□□ -1.26
SNU71YGR013W PDC5P16467 563 aaKnown RBP7.2□□□□□ -1.26
SNU71YGR013W RPC53P25441 422 aa7.2□□□□□ -1.26
SNU71YGR013W YBR225WP38321 900 aa7.2□□□□□ -1.26
SNU71YGR013W CAJ1P39101 391 aa7.2□□□□□ -1.26
SNU71YGR013W PES4P39684 611 aa7.2□□□□□ -1.26
SNU71YGR013W LYS14P40971 790 aa7.2□□□□□ -1.26
SNU71YGR013W YGR250CP53316 781 aaKnown RBP7.2□□□□□ -1.26
SNU71YGR013W TIM50Q02776 476 aa7.2□□□□□ -1.26
SNU71YGR013W YCG1Q06680 1035 aa7.2□□□□□ -1.26
SNU71YGR013W IWR1Q07532 353 aaPredicted RBP7.2□□□□□ -1.26
SNU71YGR013W MLP2P40457 1679 aa7.19□□□□□ -1.26
SNU71YGR013W MIS1P09440 975 aaKnown RBP7.19□□□□□ -1.26
SNU71YGR013W TPM1P17536 199 aaKnown RBP7.19□□□□□ -1.26
SNU71YGR013W ACO1P19414 778 aaKnown RBP RIP-Chip data7.19□□□□□ -1.26not detected
SNU71YGR013W SIR1P21691 654 aa7.19□□□□□ -1.26
SNU71YGR013W SWI4P25302 1093 aaKnown RBP7.19□□□□□ -1.26
SNU71YGR013W IMG2P25642 146 aaPredicted RBP7.19□□□□□ -1.26
SNU71YGR013W TAF5P38129 798 aa7.19□□□□□ -1.26
SNU71YGR013W MIP6P38760 659 aaKnown RBP7.19□□□□□ -1.26
SNU71YGR013W LRP1P38801 184 aaKnown RBP7.19□□□□□ -1.26
SNU71YGR013W SSP120P39931 234 aaKnown RBP7.19□□□□□ -1.26
SNU71YGR013W ROG3P43602 733 aa7.19□□□□□ -1.26
SNU71YGR013W MNT2P53059 558 aa7.19□□□□□ -1.26
SNU71YGR013W SCW11P53189 542 aa7.19□□□□□ -1.26
SNU71YGR013W EAR1Q03212 550 aa7.19□□□□□ -1.26
SNU71YGR013W YMR210WQ03649 449 aa7.19□□□□□ -1.26
SNU71YGR013W TY1A-MR1Q04215 440 aa7.19□□□□□ -1.26
SNU71YGR013W MFB1Q04922 465 aa7.19□□□□□ -1.26
SNU71YGR013W PGA3Q12746 312 aaKnown RBP7.19□□□□□ -1.26
SNU71YGR013W SMC6Q12749 1114 aa7.19□□□□□ -1.26
SNU71YGR013W IQG1Q12280 1495 aa7.19□□□□□ -1.26
SNU71YGR013W CYB2P00175 591 aa7.19□□□□□ -1.26
SNU71YGR013W SRP72P38688 640 aaKnown RBP7.19□□□□□ -1.26
SNU71YGR013W AXL1P40851 1208 aa7.19□□□□□ -1.26
SNU71YGR013W RAI1P53063 387 aaKnown RBP7.19□□□□□ -1.26
SNU71YGR013W PUS2P53167 370 aa7.19□□□□□ -1.26
SNU71YGR013W DSE4P53753 1117 aa7.19□□□□□ -1.26
SNU71YGR013W DUS1P53759 423 aaKnown RBP7.19□□□□□ -1.26
SNU71YGR013W BET2P20133 325 aa7.18□□□□□ -1.26
SNU71YGR013W MTH1P35198 433 aa7.18□□□□□ -1.26
SNU71YGR013W ALG14P38242 237 aa7.18□□□□□ -1.26
SNU71YGR013W UME6P39001 836 aa7.18□□□□□ -1.26
SNU71YGR013W YNR071CP53757 342 aa7.18□□□□□ -1.26
SNU71YGR013W YPL071CQ02864 156 aa7.18□□□□□ -1.26
SNU71YGR013W SSL1Q04673 461 aaPredicted RBP7.18□□□□□ -1.26
SNU71YGR013W STP4Q07351 490 aa7.18□□□□□ -1.26
SNU71YGR013W BYE1P36106 594 aa7.17□□□□□ -1.26
SNU71YGR013W NPR2P39923 615 aa7.17□□□□□ -1.26
SNU71YGR013W SVS1Q12254 260 aa7.17□□□□□ -1.26
SNU71YGR013W TRM3Q07527 1436 aa7.17□□□□□ -1.26
SNU71YGR013W NUP157P40064 1391 aaKnown RBP7.17□□□□□ -1.26
SNU71YGR013W RED1P14291 827 aa7.17□□□□□ -1.26
SNU71YGR013W CMP2P14747 604 aa7.17□□□□□ -1.26
SNU71YGR013W OLE1P21147 510 aaKnown RBP7.17□□□□□ -1.26
SNU71YGR013W ESL2P36168 1195 aa7.17□□□□□ -1.26
SNU71YGR013W LSM5P40089 93 aaKnown RBP7.17□□□□□ -1.26
SNU71YGR013W YIL108WP40483 696 aaKnown RBP7.17□□□□□ -1.26
SNU71YGR013W ENP2P48234 707 aaKnown RBP7.17□□□□□ -1.26
SNU71YGR013W MAP1Q01662 387 aaKnown RBP RIP-Chip data7.17□□□□□ -1.26not detected
SNU71YGR013W SPT7P35177 1332 aa7.17□□□□□ -1.26
SNU71YGR013W RPS4AP0CX35 261 aaKnown RBP7.16□□□□□ -1.26
SNU71YGR013W RPS4BP0CX36 261 aaKnown RBP7.16□□□□□ -1.26
SNU71YGR013W SGF29P25554 259 aa7.16□□□□□ -1.26
SNU71YGR013W KRR1P25586 316 aaPredicted RBP7.16□□□□□ -1.26
SNU71YGR013W DPH2P32461 534 aa7.16□□□□□ -1.26
SNU71YGR013W NPR3P38742 1146 aa7.16□□□□□ -1.26
SNU71YGR013W YLF2P38746 405 aa7.16□□□□□ -1.26
SNU71YGR013W CEM1P39525 442 aa7.16□□□□□ -1.26
SNU71YGR013W SET2P46995 733 aaKnown RBP7.16□□□□□ -1.26
SNU71YGR013W PDR15Q04182 1529 aaKnown RBP7.16□□□□□ -1.26
SNU71YGR013W SAM35P14693 329 aa7.15□□□□□ -1.26
SNU71YGR013W CKA1P15790 372 aa7.15□□□□□ -1.26
SNU71YGR013W YDR286CQ05530 114 aa7.15□□□□□ -1.26
SNU71YGR013W RSB1Q08417 382 aa7.15□□□□□ -1.26
SNU71YGR013W PUS1Q12211 544 aaKnown RBP7.15□□□□□ -1.26
SNU71YGR013W ADE3P07245 946 aaKnown RBP7.15□□□□□ -1.27
SNU71YGR013W PDX1P16451 410 aa7.15□□□□□ -1.27
SNU71YGR013W PFK2P16862 959 aaKnown RBP RIP-Chip data7.15□□□□□ -1.27not detected
SNU71YGR013W FRD1P32614 470 aaKnown RBP7.15□□□□□ -1.27
SNU71YGR013W SSL2Q00578 843 aa7.15□□□□□ -1.27
SNU71YGR013W MET17P06106 444 aa7.14□□□□□ -1.27
SNU71YGR013W ERG3P32353 365 aa7.14□□□□□ -1.27
SNU71YGR013W KHA1P40309 873 aa7.14□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 25.4 ms