RNA–Protein interactions for RNA: YGL197W

MDS3, Transcript of Putative component of the TOR regulatory pathway, yeastyeast

Gene MDS3, Length 4,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MDS3YGL197W NMA2P53204 395 aa1.76□□□□□ -2.13
MDS3YGL197W UGO1Q03327 502 aa1.76□□□□□ -2.13
MDS3YGL197W RIM13Q03792 727 aa1.76□□□□□ -2.13
MDS3YGL197W ZRT2Q12436 422 aa1.76□□□□□ -2.13
MDS3YGL197W MSD1P15179 658 aaKnown RBP1.75□□□□□ -2.13
MDS3YGL197W FUB1P25659 250 aa1.75□□□□□ -2.13
MDS3YGL197W CCT5P40413 562 aaKnown RBP1.75□□□□□ -2.13
MDS3YGL197W TAD1P53065 400 aa1.75□□□□□ -2.13
MDS3YGL197W SPO1P53541 631 aa1.75□□□□□ -2.13
MDS3YGL197W CPR8P53728 308 aa1.75□□□□□ -2.13
MDS3YGL197W TAF8Q03750 510 aa1.75□□□□□ -2.13
MDS3YGL197W TGS1Q12052 315 aa1.75□□□□□ -2.13
MDS3YGL197W YRF1-4O13559 1382 aa1.75□□□□□ -2.13
MDS3YGL197W DHR2P36009 735 aaPredicted RBP1.75□□□□□ -2.13
MDS3YGL197W BIT2P38346 545 aa1.75□□□□□ -2.13
MDS3YGL197W TEX1P53851 422 aaKnown RBP1.75□□□□□ -2.13
MDS3YGL197W AAT1Q01802 451 aa1.75□□□□□ -2.13
MDS3YGL197W VTC3Q02725 835 aa1.75□□□□□ -2.13
MDS3YGL197W JIP5Q06214 492 aaPredicted RBP1.75□□□□□ -2.13
MDS3YGL197W YPL216WQ08964 1102 aa1.75□□□□□ -2.13
MDS3YGL197W SSF2Q12153 453 aaPredicted RBP1.75□□□□□ -2.13
MDS3YGL197W YBR182C-AQ8TGU6 64 aa1.75□□□□□ -2.13
MDS3YGL197W YKR075CP36155 307 aa1.75□□□□□ -2.13
MDS3YGL197W EMP65P40085 556 aa1.75□□□□□ -2.13
MDS3YGL197W SNO3P43544 222 aa1.75□□□□□ -2.13
MDS3YGL197W LGE1Q02796 332 aaKnown RBP1.75□□□□□ -2.13
MDS3YGL197W SSL1Q04673 461 aaPredicted RBP1.75□□□□□ -2.13
MDS3YGL197W HAL9Q12180 1030 aa1.75□□□□□ -2.13
MDS3YGL197W HIR1P32479 840 aa1.74□□□□□ -2.13
MDS3YGL197W YKR018CP36114 725 aa1.74□□□□□ -2.13
MDS3YGL197W CTP1P38152 299 aa1.74□□□□□ -2.13
MDS3YGL197W ERG13P54839 491 aaKnown RBP1.74□□□□□ -2.13
MDS3YGL197W NSE5Q03718 556 aa1.74□□□□□ -2.13
MDS3YGL197W TPK2P06245 380 aa1.74□□□□□ -2.13
MDS3YGL197W VBA3P25594 458 aa1.74□□□□□ -2.13
MDS3YGL197W MVD1P32377 396 aaKnown RBP1.74□□□□□ -2.13
MDS3YGL197W PET127P32606 800 aa1.74□□□□□ -2.13
MDS3YGL197W PCM1P38628 557 aaKnown RBP1.74□□□□□ -2.13
MDS3YGL197W PCL10P53124 433 aa1.74□□□□□ -2.13
MDS3YGL197W MUK1Q02866 612 aa1.74□□□□□ -2.13
MDS3YGL197W IRC13Q08630 104 aa1.74□□□□□ -2.13
MDS3YGL197W VAC8P39968 578 aa1.74□□□□□ -2.13
MDS3YGL197W NPY1P53164 384 aa1.74□□□□□ -2.13
MDS3YGL197W YGR125WP53273 1036 aa1.74□□□□□ -2.13
MDS3YGL197W UFO1Q04511 668 aa1.74□□□□□ -2.13
MDS3YGL197W MRPL1Q04599 285 aa1.74□□□□□ -2.13
MDS3YGL197W TUP1P16649 713 aa1.74□□□□□ -2.13
MDS3YGL197W AEP2P22136 580 aa1.74□□□□□ -2.13
MDS3YGL197W RPA135P22138 1203 aaKnown RBP1.74□□□□□ -2.13
MDS3YGL197W MTC2P34246 357 aa1.74□□□□□ -2.13
MDS3YGL197W LAS21P40367 830 aa1.74□□□□□ -2.13
MDS3YGL197W ALD6P54115 500 aaKnown RBP1.74□□□□□ -2.13
MDS3YGL197W YLR125WQ12138 136 aa1.74□□□□□ -2.13
MDS3YGL197W YOR022CQ12204 715 aa1.74□□□□□ -2.13
MDS3YGL197W TIM54P47045 478 aa1.73□□□□□ -2.13
MDS3YGL197W MTD1Q02046 320 aaKnown RBP1.73□□□□□ -2.13
MDS3YGL197W VBA4Q04602 768 aaKnown RBP1.73□□□□□ -2.13
MDS3YGL197W MDM12Q92328 271 aa1.73□□□□□ -2.13
MDS3YGL197W RRP3P38712 501 aaKnown RBP1.73□□□□□ -2.13
MDS3YGL197W HRB1P38922 454 aaKnown RBP RIP-Chip data1.73□□□□□ -2.13not detected
MDS3YGL197W PCI8P40512 444 aa1.73□□□□□ -2.13
MDS3YGL197W HXT16P47185 567 aa1.73□□□□□ -2.13
MDS3YGL197W MPS1P54199 764 aa1.73□□□□□ -2.13
MDS3YGL197W NHX1Q04121 633 aa1.73□□□□□ -2.13
MDS3YGL197W POM34Q12445 299 aa1.73□□□□□ -2.13
MDS3YGL197W RAD4P14736 754 aa1.73□□□□□ -2.13
MDS3YGL197W HOG1P32485 435 aa1.73□□□□□ -2.13
MDS3YGL197W RPC34P32910 317 aa1.73□□□□□ -2.13
MDS3YGL197W PAM1P37304 830 aaKnown RBP1.73□□□□□ -2.13
MDS3YGL197W YPL068CQ02749 293 aa1.73□□□□□ -2.13
MDS3YGL197W NUP53Q03790 475 aa1.73□□□□□ -2.13
MDS3YGL197W YPR071WQ12346 211 aa1.73□□□□□ -2.13
MDS3YGL197W NMD2P38798 1089 aaKnown RBP1.72□□□□□ -2.13
MDS3YGL197W MNT3P40549 630 aa1.72□□□□□ -2.13
MDS3YGL197W ULA1Q12059 462 aa1.72□□□□□ -2.13
MDS3YGL197W RAV1P47104 1357 aa1.72□□□□□ -2.13
MDS3YGL197W GRX1P25373 110 aaKnown RBP1.72□□□□□ -2.13
MDS3YGL197W RPD3P32561 433 aa1.72□□□□□ -2.13
MDS3YGL197W MRPL36P36531 177 aa1.72□□□□□ -2.13
MDS3YGL197W RTT107P38850 1070 aa1.72□□□□□ -2.13
MDS3YGL197W DOT6P40059 670 aaKnown RBP1.72□□□□□ -2.13
MDS3YGL197W SET2P46995 733 aaKnown RBP1.72□□□□□ -2.13
MDS3YGL197W YJR039WP47107 1121 aa1.72□□□□□ -2.13
MDS3YGL197W TAN1P53072 289 aaPredicted RBP1.72□□□□□ -2.13
MDS3YGL197W THI7Q05998 598 aa1.72□□□□□ -2.13
MDS3YGL197W YDL086WQ07505 273 aa1.72□□□□□ -2.13
MDS3YGL197W CRT10Q08226 957 aa1.72□□□□□ -2.13
MDS3YGL197W CHS5Q12114 671 aaKnown RBP1.72□□□□□ -2.13
MDS3YGL197W RGT2Q12300 763 aa1.72□□□□□ -2.13
MDS3YGL197W SEC12P11655 471 aa1.72□□□□□ -2.13
MDS3YGL197W CDC15P27636 974 aa1.72□□□□□ -2.13
MDS3YGL197W TOM71P38825 639 aaKnown RBP1.72□□□□□ -2.13
MDS3YGL197W CCT7P42943 550 aaKnown RBP1.72□□□□□ -2.13
MDS3YGL197W FDC1Q03034 503 aa1.72□□□□□ -2.13
MDS3YGL197W FLC1Q08967 793 aa1.72□□□□□ -2.13
MDS3YGL197W WHI2P12611 486 aa1.72□□□□□ -2.13
MDS3YGL197W CAP1P28495 268 aaKnown RBP1.72□□□□□ -2.13
MDS3YGL197W FMO1P38866 432 aa1.72□□□□□ -2.13
MDS3YGL197W PAN2P53010 1115 aaPredicted RBP1.72□□□□□ -2.13
MDS3YGL197W GPR1Q12361 961 aa1.72□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 9.1 ms