RNA–Protein interactions for RNA: YDR378C

LSM6, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM6, Length 261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM6YDR378C SAW1P39735 261 aa5.91□□□□□ -1.46
LSM6YDR378C FHN1P53279 174 aa5.91□□□□□ -1.46
LSM6YDR378C VPS5Q92331 675 aa5.91□□□□□ -1.46
LSM6YDR378C GAL1P04385 528 aa5.9□□□□□ -1.46
LSM6YDR378C PTP2P29461 750 aa5.9□□□□□ -1.46
LSM6YDR378C SDS22P36047 338 aa5.9□□□□□ -1.46
LSM6YDR378C SSP120P39931 234 aaKnown RBP5.9□□□□□ -1.46
LSM6YDR378C MPS3P47069 682 aa5.9□□□□□ -1.46
LSM6YDR378C PIP2P52960 996 aa5.9□□□□□ -1.46
LSM6YDR378C MDR1P53258 950 aa5.9□□□□□ -1.46
LSM6YDR378C NUR1Q12066 484 aa5.9□□□□□ -1.46
LSM6YDR378C MLH3Q12083 715 aa5.9□□□□□ -1.46
LSM6YDR378C PSF3Q12146 194 aa5.9□□□□□ -1.46
LSM6YDR378C TUF1P02992 437 aaKnown RBP5.89□□□□□ -1.47
LSM6YDR378C HMG2P12684 1045 aa5.89□□□□□ -1.47
LSM6YDR378C HOP1P20050 605 aa5.89□□□□□ -1.47
LSM6YDR378C PHO3P24031 467 aa5.89□□□□□ -1.47
LSM6YDR378C RIM4P38741 713 aa5.89□□□□□ -1.47
LSM6YDR378C CRG1P38892 291 aaRIP-Chip data5.89□□□□□ -1.47not detected
LSM6YDR378C FTR1P40088 404 aa5.89□□□□□ -1.47
LSM6YDR378C ATG36P46983 293 aa5.89□□□□□ -1.47
LSM6YDR378C PEF1P53238 335 aa5.89□□□□□ -1.47
LSM6YDR378C FDC1Q03034 503 aa5.89□□□□□ -1.47
LSM6YDR378C HLR1Q04429 423 aa5.89□□□□□ -1.47
LSM6YDR378C MLC2Q06580 163 aa5.89□□□□□ -1.47
LSM6YDR378C YCG1Q06680 1035 aa5.89□□□□□ -1.47
LSM6YDR378C HBT1Q07653 1046 aaKnown RBP5.89□□□□□ -1.47
LSM6YDR378C CWH43P25618 953 aa5.88□□□□□ -1.47
LSM6YDR378C RMA1P36001 430 aaKnown RBP5.88□□□□□ -1.47
LSM6YDR378C TAF5P38129 798 aa5.88□□□□□ -1.47
LSM6YDR378C CTP1P38152 299 aa5.88□□□□□ -1.47
LSM6YDR378C CDS1P38221 457 aa5.88□□□□□ -1.47
LSM6YDR378C TMN3P40071 706 aa5.88□□□□□ -1.47
LSM6YDR378C ASK10P48361 1146 aa5.88□□□□□ -1.47
LSM6YDR378C ATG4P53867 494 aa5.88□□□□□ -1.47
LSM6YDR378C CTF4Q01454 927 aa5.88□□□□□ -1.47
LSM6YDR378C YDL086WQ07505 273 aa5.88□□□□□ -1.47
LSM6YDR378C USV1Q12132 391 aa5.88□□□□□ -1.47
LSM6YDR378C PNS1Q12412 539 aa5.88□□□□□ -1.47
LSM6YDR378C THR1P17423 357 aaKnown RBP5.87□□□□□ -1.47
LSM6YDR378C FUB1P25659 250 aa5.87□□□□□ -1.47
LSM6YDR378C MTC7P32633 139 aa5.87□□□□□ -1.47
LSM6YDR378C TGL1P34163 548 aa5.87□□□□□ -1.47
LSM6YDR378C CHS7P38843 316 aa5.87□□□□□ -1.47
LSM6YDR378C KHA1P40309 873 aa5.87□□□□□ -1.47
LSM6YDR378C ARG2P40360 574 aa5.87□□□□□ -1.47
LSM6YDR378C CTR1P49573 406 aa5.87□□□□□ -1.47
LSM6YDR378C STB4P50104 949 aa5.87□□□□□ -1.47
LSM6YDR378C MUK1Q02866 612 aa5.87□□□□□ -1.47
LSM6YDR378C HOS1Q12214 470 aa5.87□□□□□ -1.47
LSM6YDR378C TUP1P16649 713 aa5.86□□□□□ -1.47
LSM6YDR378C SCS2P40075 244 aaKnown RBP5.86□□□□□ -1.47
LSM6YDR378C NDC80P40460 691 aa5.86□□□□□ -1.47
LSM6YDR378C HIS6P40545 261 aa5.86□□□□□ -1.47
LSM6YDR378C TAH11P47112 604 aa5.86□□□□□ -1.47
LSM6YDR378C MNT2P53059 558 aa5.86□□□□□ -1.47
LSM6YDR378C YGR151CP53287 111 aa5.86□□□□□ -1.47
LSM6YDR378C MCH5Q08777 521 aa5.86□□□□□ -1.47
LSM6YDR378C RRP6Q12149 733 aaKnown RBP5.86□□□□□ -1.47
LSM6YDR378C SEC12P11655 471 aa5.85□□□□□ -1.47
LSM6YDR378C PET309P32522 965 aaPredicted RBP5.85□□□□□ -1.47
LSM6YDR378C YEL025CP39991 1188 aa5.85□□□□□ -1.47
LSM6YDR378C SMX3P54999 86 aaPredicted RBP5.85□□□□□ -1.47
LSM6YDR378C YSH1Q06224 779 aaPredicted RBP5.85□□□□□ -1.47
LSM6YDR378C RTK1Q12100 620 aaPredicted RBP5.85□□□□□ -1.47
LSM6YDR378C VAS1P07806 1104 aaKnown RBP5.84□□□□□ -1.47
LSM6YDR378C MSS1P32559 526 aaPredicted RBP5.84□□□□□ -1.47
LSM6YDR378C OAR1P35731 278 aa5.84□□□□□ -1.47
LSM6YDR378C APL3P38065 1025 aa5.84□□□□□ -1.47
LSM6YDR378C PPE1P38796 400 aa5.84□□□□□ -1.47
LSM6YDR378C YHR097CP38809 366 aaKnown RBP5.84□□□□□ -1.47
LSM6YDR378C MAD2P40958 196 aa5.84□□□□□ -1.47
LSM6YDR378C TIM50Q02776 476 aa5.84□□□□□ -1.47
LSM6YDR378C CEF1Q03654 590 aaPredicted RBP5.84□□□□□ -1.47
LSM6YDR378C IZH3Q07959 543 aa5.84□□□□□ -1.47
LSM6YDR378C YOL114CQ12322 202 aa5.84□□□□□ -1.47
LSM6YDR378C CBP3P21560 335 aa5.83□□□□□ -1.48
LSM6YDR378C SET3P36124 751 aa5.83□□□□□ -1.48
LSM6YDR378C GLG1P36143 616 aa5.83□□□□□ -1.48
LSM6YDR378C EHT1P38295 451 aa5.83□□□□□ -1.48
LSM6YDR378C YDL183CP48569 320 aa5.83□□□□□ -1.48
LSM6YDR378C PAP2P53632 584 aaKnown RBP5.83□□□□□ -1.48
LSM6YDR378C CEG1Q01159 459 aaPredicted RBP5.83□□□□□ -1.48
LSM6YDR378C DIN7Q12086 430 aa5.83□□□□□ -1.48
LSM6YDR378C ARP7Q12406 477 aa5.83□□□□□ -1.48
LSM6YDR378C DHR2P36009 735 aaPredicted RBP5.82□□□□□ -1.48
LSM6YDR378C ELF1P36053 145 aa5.82□□□□□ -1.48
LSM6YDR378C MOH1P38191 138 aa5.82□□□□□ -1.48
LSM6YDR378C KSP1P38691 1029 aaKnown RBP5.82□□□□□ -1.48
LSM6YDR378C PUS4P48567 403 aaKnown RBP5.82□□□□□ -1.48
LSM6YDR378C YGR054WP53235 642 aaKnown RBP5.82□□□□□ -1.48
LSM6YDR378C DIP5P53388 608 aa5.82□□□□□ -1.48
LSM6YDR378C YNR071CP53757 342 aa5.82□□□□□ -1.48
LSM6YDR378C TEP1P53916 434 aa5.82□□□□□ -1.48
LSM6YDR378C VMS1Q04311 632 aaKnown RBP5.82□□□□□ -1.48
LSM6YDR378C TRI1Q05024 226 aa5.82□□□□□ -1.48
LSM6YDR378C URA3P03962 267 aa5.81□□□□□ -1.48
LSM6YDR378C CDC43P18898 376 aa5.81□□□□□ -1.48
LSM6YDR378C ARG1P22768 420 aa5.81□□□□□ -1.48
LSM6YDR378C RRP8P38961 392 aaKnown RBP5.81□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms