RNA–Protein interactions for RNA: YDR299W

BFR2, Transcript of Component of the SSU and 90S preribosomes, yeastyeast

Gene BFR2, Length 1,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BFR2YDR299W SPC97P38863 823 aa1.4□□□□□ -2.19
BFR2YDR299W NUG1P40010 520 aaKnown RBP1.4□□□□□ -2.19
BFR2YDR299W TMN3P40071 706 aa1.4□□□□□ -2.19
BFR2YDR299W PCI8P40512 444 aa1.4□□□□□ -2.19
BFR2YDR299W NMD5P46970 1048 aa1.4□□□□□ -2.19
BFR2YDR299W BFA1P47113 574 aa1.4□□□□□ -2.19
BFR2YDR299W LSC1P53598 329 aaKnown RBP1.4□□□□□ -2.19
BFR2YDR299W ORC1P54784 914 aaPredicted RBP1.4□□□□□ -2.19
BFR2YDR299W RSC9Q03124 581 aa1.4□□□□□ -2.19
BFR2YDR299W YMR210WQ03649 449 aa1.4□□□□□ -2.19
BFR2YDR299W ATG33Q06485 197 aa1.4□□□□□ -2.19
BFR2YDR299W YDL073WQ07454 984 aa1.4□□□□□ -2.19
BFR2YDR299W YPL216WQ08964 1102 aa1.4□□□□□ -2.19
BFR2YDR299W DCS2Q12123 353 aa1.4□□□□□ -2.19
BFR2YDR299W AQY1P0CD91 305 aa1.39□□□□□ -2.19
BFR2YDR299W NOP1P15646 327 aaKnown RBP1.39□□□□□ -2.19
BFR2YDR299W YAP1P19880 650 aaKnown RBP1.39□□□□□ -2.19
BFR2YDR299W ASK1P35734 292 aa1.39□□□□□ -2.19
BFR2YDR299W GIS2P53849 153 aaKnown RBP RIP-Chip data1.39□□□□□ -2.19 RIP-Chip
BFR2YDR299W RCR2Q03446 210 aaKnown RBP1.39□□□□□ -2.19
BFR2YDR299W COG8Q04632 607 aa1.39□□□□□ -2.19
BFR2YDR299W GIN4Q12263 1142 aa1.39□□□□□ -2.19
BFR2YDR299W YMR084WA2P2R3 262 aa1.38□□□□□ -2.19
BFR2YDR299W SRP40P32583 406 aaPredicted RBP1.38□□□□□ -2.19
BFR2YDR299W PXL1P36166 706 aa1.38□□□□□ -2.19
BFR2YDR299W MAL31P38156 614 aa1.38□□□□□ -2.19
BFR2YDR299W PXA1P41909 870 aa1.38□□□□□ -2.19
BFR2YDR299W MAF1P41910 395 aa1.38□□□□□ -2.19
BFR2YDR299W NNF1P47149 201 aa1.38□□□□□ -2.19
BFR2YDR299W COQ6P53318 479 aa1.38□□□□□ -2.19
BFR2YDR299W SPO1P53541 631 aa1.38□□□□□ -2.19
BFR2YDR299W TIM50Q02776 476 aa1.38□□□□□ -2.19
BFR2YDR299W YLR407WQ06070 228 aa1.38□□□□□ -2.19
BFR2YDR299W YLR125WQ12138 136 aa1.38□□□□□ -2.19
BFR2YDR299W HER1Q12276 1246 aa1.38□□□□□ -2.19
BFR2YDR299W WHI2P12611 486 aa1.37□□□□□ -2.19
BFR2YDR299W SFL1P20134 766 aa1.37□□□□□ -2.19
BFR2YDR299W SSD1P24276 1250 aaKnown RBP RIP-Chip data1.37□□□□□ -2.19not detected
BFR2YDR299W PCL2P25693 308 aa1.37□□□□□ -2.19
BFR2YDR299W YKU70P32807 602 aa1.37□□□□□ -2.19
BFR2YDR299W YPT7P32939 208 aa1.37□□□□□ -2.19
BFR2YDR299W YKL091CP33324 310 aaKnown RBP1.37□□□□□ -2.19
BFR2YDR299W PEX6P33760 1030 aa1.37□□□□□ -2.19
BFR2YDR299W GCS1P35197 352 aa1.37□□□□□ -2.19
BFR2YDR299W MRPL7P36519 292 aa1.37□□□□□ -2.19
BFR2YDR299W PCM1P38628 557 aaKnown RBP1.37□□□□□ -2.19
BFR2YDR299W BUD17P53727 317 aa1.37□□□□□ -2.19
BFR2YDR299W IDP3P53982 420 aaKnown RBP1.37□□□□□ -2.19
BFR2YDR299W CEF1Q03654 590 aaPredicted RBP1.37□□□□□ -2.19
BFR2YDR299W PPN1Q04119 674 aa1.37□□□□□ -2.19
BFR2YDR299W GFD1Q04839 188 aaKnown RBP1.37□□□□□ -2.19
BFR2YDR299W BSP1Q06604 576 aa1.37□□□□□ -2.19
BFR2YDR299W CRC1Q12289 327 aa1.37□□□□□ -2.19
BFR2YDR299W YPR089WO13585 888 aa1.37□□□□□ -2.19
BFR2YDR299W PHO8P11491 566 aa1.37□□□□□ -2.19
BFR2YDR299W RNR3P21672 869 aaKnown RBP1.37□□□□□ -2.19
BFR2YDR299W THI4P32318 326 aa1.37□□□□□ -2.19
BFR2YDR299W LOT5P34234 306 aa1.37□□□□□ -2.19
BFR2YDR299W PBP2P38151 413 aaKnown RBP RIP-Chip data1.37□□□□□ -2.19not detected
BFR2YDR299W CCT4P39078 528 aaKnown RBP1.37□□□□□ -2.19
BFR2YDR299W NUP82P40368 713 aa1.37□□□□□ -2.19
BFR2YDR299W OPT1P40897 799 aa1.37□□□□□ -2.19
BFR2YDR299W BUD8P41698 603 aa1.37□□□□□ -2.19
BFR2YDR299W YFL015CP43578 164 aa1.37□□□□□ -2.19
BFR2YDR299W OSW7P43611 510 aa1.37□□□□□ -2.19
BFR2YDR299W YNL018CP53976 612 aa1.37□□□□□ -2.19
BFR2YDR299W YPL071CQ02864 156 aa1.37□□□□□ -2.19
BFR2YDR299W FDC1Q03034 503 aa1.37□□□□□ -2.19
BFR2YDR299W UGO1Q03327 502 aa1.37□□□□□ -2.19
BFR2YDR299W EFR3Q03653 782 aaKnown RBP1.37□□□□□ -2.19
BFR2YDR299W NUP53Q03790 475 aa1.37□□□□□ -2.19
BFR2YDR299W FPR4Q06205 392 aaPredicted RBP1.37□□□□□ -2.19
BFR2YDR299W YPS7Q06325 596 aa1.37□□□□□ -2.19
BFR2YDR299W YOL098CQ12496 1037 aa1.37□□□□□ -2.19
BFR2YDR299W YMR085WP0CF18 432 aa1.36□□□□□ -2.19
BFR2YDR299W MSH2P25847 964 aa1.36□□□□□ -2.19
BFR2YDR299W GSY2P27472 705 aa1.36□□□□□ -2.19
BFR2YDR299W CNE1P27825 502 aa1.36□□□□□ -2.19
BFR2YDR299W DHR2P36009 735 aaPredicted RBP1.36□□□□□ -2.19
BFR2YDR299W DUN1P39009 513 aa1.36□□□□□ -2.19
BFR2YDR299W BEM4P39011 633 aa1.36□□□□□ -2.19
BFR2YDR299W YMR124WP39523 943 aaKnown RBP1.36□□□□□ -2.19
BFR2YDR299W EXO1P39875 702 aa1.36□□□□□ -2.19
BFR2YDR299W YEL025CP39991 1188 aa1.36□□□□□ -2.19
BFR2YDR299W YAT2P40017 923 aa1.36□□□□□ -2.19
BFR2YDR299W YIL092WP40497 633 aa1.36□□□□□ -2.19
BFR2YDR299W YIL024CP40543 189 aa1.36□□□□□ -2.19
BFR2YDR299W BST1P43571 1029 aa1.36□□□□□ -2.19
BFR2YDR299W YGR054WP53235 642 aaKnown RBP1.36□□□□□ -2.19
BFR2YDR299W MRPL1Q04599 285 aa1.36□□□□□ -2.19
BFR2YDR299W TPO3Q06451 622 aa1.36□□□□□ -2.19
BFR2YDR299W GUD1Q07729 489 aa1.36□□□□□ -2.19
BFR2YDR299W TGS1Q12052 315 aa1.36□□□□□ -2.19
BFR2YDR299W RDL1Q12305 139 aaKnown RBP1.36□□□□□ -2.19
BFR2YDR299W AIM44Q99299 758 aa1.36□□□□□ -2.19
BFR2YDR299W BI2P03873 423 aa1.35□□□□□ -2.19
BFR2YDR299W IME1P21190 360 aa1.35□□□□□ -2.19
BFR2YDR299W CRG1P38892 291 aaRIP-Chip data1.35□□□□□ -2.19not detected
BFR2YDR299W FLO5P38894 1075 aa1.35□□□□□ -2.19
BFR2YDR299W FTR1P40088 404 aa1.35□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 30.3 ms