RNA–Protein interactions for RNA: YDR227W

SIR4, Transcript of SIR protein involved in assembly of silent chromatin domains, yeastyeast

Gene SIR4, Length 4,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR4YDR227W RRN7P40992 514 aa2.3□□□□□ -2.04
SIR4YDR227W ABZ2Q03266 374 aa2.3□□□□□ -2.04
SIR4YDR227W SUT2Q12286 268 aa2.3□□□□□ -2.04
SIR4YDR227W MED1Q12321 566 aa2.3□□□□□ -2.04
SIR4YDR227W PRP9P19736 530 aaKnown RBP2.3□□□□□ -2.04
SIR4YDR227W SFL1P20134 766 aa2.3□□□□□ -2.04
SIR4YDR227W NUD1P32336 851 aa2.3□□□□□ -2.04
SIR4YDR227W PEX2P32800 271 aa2.3□□□□□ -2.04
SIR4YDR227W RIM11P38615 370 aa2.3□□□□□ -2.04
SIR4YDR227W ORC6P38826 435 aa2.3□□□□□ -2.04
SIR4YDR227W WSS1P38838 269 aa2.3□□□□□ -2.04
SIR4YDR227W RPN10P38886 268 aaKnown RBP2.3□□□□□ -2.04
SIR4YDR227W STL1P39932 569 aa2.3□□□□□ -2.04
SIR4YDR227W CUL3P53202 744 aa2.3□□□□□ -2.04
SIR4YDR227W SNP1Q00916 300 aaPredicted RBP2.3□□□□□ -2.04
SIR4YDR227W YMR210WQ03649 449 aa2.3□□□□□ -2.04
SIR4YDR227W NOP12Q08208 459 aaKnown RBP2.3□□□□□ -2.04
SIR4YDR227W HOS1Q12214 470 aa2.3□□□□□ -2.04
SIR4YDR227W MRPL23Q12487 163 aaPredicted RBP2.3□□□□□ -2.04
SIR4YDR227W Q0182Q9ZZW1 134 aa2.3□□□□□ -2.04
SIR4YDR227W YLR302CO13544 120 aa2.29□□□□□ -2.04
SIR4YDR227W PIF1P07271 859 aa2.29□□□□□ -2.04
SIR4YDR227W CDC4P07834 779 aa2.29□□□□□ -2.04
SIR4YDR227W SBP1P10080 294 aaKnown RBP2.29□□□□□ -2.04
SIR4YDR227W GUK1P15454 187 aaKnown RBP2.29□□□□□ -2.04
SIR4YDR227W LCB1P25045 558 aaKnown RBP2.29□□□□□ -2.04
SIR4YDR227W KDX1P36005 433 aa2.29□□□□□ -2.04
SIR4YDR227W TEF4P36008 412 aaKnown RBP2.29□□□□□ -2.04
SIR4YDR227W MRPL37P36532 105 aa2.29□□□□□ -2.04
SIR4YDR227W YBR197CP38306 217 aa2.29□□□□□ -2.04
SIR4YDR227W LEU5P38702 357 aa2.29□□□□□ -2.04
SIR4YDR227W YIL166CP40445 542 aa2.29□□□□□ -2.04
SIR4YDR227W AGX1P43567 385 aa2.29□□□□□ -2.04
SIR4YDR227W RET3P53600 189 aa2.29□□□□□ -2.04
SIR4YDR227W RTT10Q08924 1013 aa2.29□□□□□ -2.04
SIR4YDR227W BMS1Q08965 1183 aaKnown RBP2.29□□□□□ -2.04
SIR4YDR227W PRT1P06103 763 aaKnown RBP2.29□□□□□ -2.04
SIR4YDR227W YER152CP10356 443 aa2.29□□□□□ -2.04
SIR4YDR227W STE12P13574 688 aa2.29□□□□□ -2.04
SIR4YDR227W CLB4P24871 460 aa2.29□□□□□ -2.04
SIR4YDR227W RPL5P26321 297 aaKnown RBP2.29□□□□□ -2.04
SIR4YDR227W MSP1P28737 362 aa2.29□□□□□ -2.04
SIR4YDR227W YUH1P35127 236 aa2.29□□□□□ -2.04
SIR4YDR227W REG2P38232 338 aa2.29□□□□□ -2.04
SIR4YDR227W ARF3P40994 183 aaRIP-Chip data2.29□□□□□ -2.04not detected
SIR4YDR227W SEC26P41810 973 aaKnown RBP2.29□□□□□ -2.04
SIR4YDR227W FIG4P42837 879 aa2.29□□□□□ -2.04
SIR4YDR227W RET2P43621 546 aa2.29□□□□□ -2.04
SIR4YDR227W RMD1Q03441 430 aa2.29□□□□□ -2.04
SIR4YDR227W WAR1Q03631 944 aa2.29□□□□□ -2.04
SIR4YDR227W MRPL1Q04599 285 aa2.29□□□□□ -2.04
SIR4YDR227W CDC45Q08032 650 aa2.29□□□□□ -2.04
SIR4YDR227W COX17Q12287 69 aa2.29□□□□□ -2.04
SIR4YDR227W YDR061WQ12298 539 aa2.29□□□□□ -2.04
SIR4YDR227W CDC9P04819 755 aa2.29□□□□□ -2.04
SIR4YDR227W DMC1P25453 334 aa2.29□□□□□ -2.04
SIR4YDR227W BUD14P27637 709 aa2.29□□□□□ -2.04
SIR4YDR227W SPC110P32380 944 aa2.29□□□□□ -2.04
SIR4YDR227W YHB1P39676 399 aaKnown RBP2.29□□□□□ -2.04
SIR4YDR227W ESL1P40456 1118 aa2.29□□□□□ -2.04
SIR4YDR227W MET12P46151 657 aa2.29□□□□□ -2.04
SIR4YDR227W YGR054WP53235 642 aaKnown RBP2.29□□□□□ -2.04
SIR4YDR227W JJJ1P53863 590 aa2.29□□□□□ -2.04
SIR4YDR227W MSH6Q03834 1242 aa2.29□□□□□ -2.04
SIR4YDR227W CSC1Q06538 782 aa2.29□□□□□ -2.04
SIR4YDR227W PEX19Q07418 342 aa2.29□□□□□ -2.04
SIR4YDR227W CUE5Q08412 411 aaKnown RBP2.29□□□□□ -2.04
SIR4YDR227W LEU1P07264 779 aaKnown RBP2.28□□□□□ -2.04
SIR4YDR227W CDC34P14682 295 aa2.28□□□□□ -2.04
SIR4YDR227W STB6P36085 766 aa2.28□□□□□ -2.04
SIR4YDR227W MTG2P38860 518 aa2.28□□□□□ -2.04
SIR4YDR227W CEP3P40969 608 aa2.28□□□□□ -2.04
SIR4YDR227W STU2P46675 888 aa2.28□□□□□ -2.04
SIR4YDR227W PSP1P50896 841 aaKnown RBP2.28□□□□□ -2.04
SIR4YDR227W YNL011CP53980 444 aa2.28□□□□□ -2.04
SIR4YDR227W DAK1P54838 584 aaKnown RBP2.28□□□□□ -2.04
SIR4YDR227W MPC54Q08550 464 aa2.28□□□□□ -2.04
SIR4YDR227W YOL114CQ12322 202 aa2.28□□□□□ -2.04
SIR4YDR227W MEX67Q99257 599 aaKnown RBP2.28□□□□□ -2.04
SIR4YDR227W TPK1P06244 397 aa2.28□□□□□ -2.04
SIR4YDR227W RPL3P14126 387 aaKnown RBP2.28□□□□□ -2.04
SIR4YDR227W MVD1P32377 396 aaKnown RBP2.28□□□□□ -2.04
SIR4YDR227W CUE2P36075 443 aaKnown RBP2.28□□□□□ -2.04
SIR4YDR227W BET3P36149 193 aa2.28□□□□□ -2.04
SIR4YDR227W ARP1P38696 384 aa2.28□□□□□ -2.04
SIR4YDR227W YHL026CP38740 315 aa2.28□□□□□ -2.04
SIR4YDR227W GUP1P53154 560 aa2.28□□□□□ -2.04
SIR4YDR227W NAF1P53919 492 aaKnown RBP2.28□□□□□ -2.04
SIR4YDR227W MOT3P54785 490 aaKnown RBP2.28□□□□□ -2.04
SIR4YDR227W RAD33Q04231 177 aa2.28□□□□□ -2.04
SIR4YDR227W STP4Q07351 490 aa2.28□□□□□ -2.04
SIR4YDR227W CPA2P03965 1118 aaKnown RBP2.28□□□□□ -2.04
SIR4YDR227W NOT3P06102 836 aaKnown RBP2.28□□□□□ -2.04
SIR4YDR227W REC107P21651 314 aa2.28□□□□□ -2.04
SIR4YDR227W RFA1P22336 621 aaKnown RBP2.28□□□□□ -2.04
SIR4YDR227W MKS1P34072 584 aa2.28□□□□□ -2.04
SIR4YDR227W AAP1P37898 856 aaKnown RBP2.28□□□□□ -2.04
SIR4YDR227W APM3P38153 483 aa2.28□□□□□ -2.04
SIR4YDR227W YHL041WP38730 149 aa2.28□□□□□ -2.04
SIR4YDR227W YIL092WP40497 633 aa2.28□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms