RNA–Protein interactions for RNA: YDR218C

SPR28, Transcript of Sporulation-specific homolog of the CDC3/10/11/12 family of genes, yeastyeast

Gene SPR28, Length 1,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPR28YDR218C SPC72P39723 622 aa5.04□□□□□ -1.6
SPR28YDR218C UBP7P40453 1071 aa5.04□□□□□ -1.6
SPR28YDR218C UPF3P48412 387 aaKnown RBP5.04□□□□□ -1.6
SPR28YDR218C YGR012WP53206 393 aa5.04□□□□□ -1.6
SPR28YDR218C YGR283CP53336 341 aaPredicted RBP5.04□□□□□ -1.6
SPR28YDR218C SRT1Q03175 343 aa5.04□□□□□ -1.6
SPR28YDR218C HLR1Q04429 423 aa5.04□□□□□ -1.6
SPR28YDR218C SMF3Q12078 473 aaPredicted RBP5.04□□□□□ -1.6
SPR28YDR218C SGT2Q12118 346 aaKnown RBP5.04□□□□□ -1.6
SPR28YDR218C ARP7Q12406 477 aa5.04□□□□□ -1.6
SPR28YDR218C VMA2P16140 517 aaKnown RBP5.03□□□□□ -1.6
SPR28YDR218C PDX1P16451 410 aa5.03□□□□□ -1.6
SPR28YDR218C HOP1P20050 605 aa5.03□□□□□ -1.6
SPR28YDR218C PHO3P24031 467 aa5.03□□□□□ -1.6
SPR28YDR218C RPC53P25441 422 aa5.03□□□□□ -1.6
SPR28YDR218C PER1P25625 357 aa5.03□□□□□ -1.6
SPR28YDR218C NPL6P32832 435 aa5.03□□□□□ -1.6
SPR28YDR218C ECM21P38167 1117 aaKnown RBP5.03□□□□□ -1.6
SPR28YDR218C YHR218WP38899 603 aa5.03□□□□□ -1.6
SPR28YDR218C TOK1P40310 691 aa5.03□□□□□ -1.6
SPR28YDR218C SAE2P46946 345 aa5.03□□□□□ -1.6
SPR28YDR218C CBK1P53894 756 aa5.03□□□□□ -1.6
SPR28YDR218C CIA1Q05583 330 aa5.03□□□□□ -1.6
SPR28YDR218C YLL058WQ12198 575 aa5.03□□□□□ -1.6
SPR28YDR218C CEX1Q12453 761 aa5.03□□□□□ -1.6
SPR28YDR218C PMS1P14242 873 aa5.02□□□□□ -1.61
SPR28YDR218C DPH2P32461 534 aa5.02□□□□□ -1.61
SPR28YDR218C MTH1P35198 433 aa5.02□□□□□ -1.61
SPR28YDR218C RIC1P40395 1056 aa5.02□□□□□ -1.61
SPR28YDR218C ALY2P47029 1046 aa5.02□□□□□ -1.61
SPR28YDR218C BUL1P48524 976 aa5.02□□□□□ -1.61
SPR28YDR218C YNL058CP53947 316 aa5.02□□□□□ -1.61
SPR28YDR218C TIM10P87108 93 aa5.02□□□□□ -1.61
SPR28YDR218C SEC5P89102 971 aa5.02□□□□□ -1.61
SPR28YDR218C CEG1Q01159 459 aaPredicted RBP5.02□□□□□ -1.61
SPR28YDR218C YDR338CQ05497 695 aa5.02□□□□□ -1.61
SPR28YDR218C HEL2Q05580 639 aaKnown RBP5.02□□□□□ -1.61
SPR28YDR218C WHI4Q07655 649 aaKnown RBP5.02□□□□□ -1.61
SPR28YDR218C APL5Q08951 932 aaKnown RBP5.02□□□□□ -1.61
SPR28YDR218C NPC2Q12408 173 aa5.02□□□□□ -1.61
SPR28YDR218C CDC16P09798 840 aa5.01□□□□□ -1.61
SPR28YDR218C MET8P15807 274 aa5.01□□□□□ -1.61
SPR28YDR218C GLK1P17709 500 aaKnown RBP5.01□□□□□ -1.61
SPR28YDR218C UTP9P38882 575 aaKnown RBP5.01□□□□□ -1.61
SPR28YDR218C PSF2P40359 213 aa5.01□□□□□ -1.61
SPR28YDR218C FYV8P46949 817 aaKnown RBP5.01□□□□□ -1.61
SPR28YDR218C TAD1P53065 400 aa5.01□□□□□ -1.61
SPR28YDR218C YAP1802P53309 568 aa5.01□□□□□ -1.61
SPR28YDR218C MOT3P54785 490 aaKnown RBP5.01□□□□□ -1.61
SPR28YDR218C CIK1Q01649 594 aa5.01□□□□□ -1.61
SPR28YDR218C VID22Q05934 901 aa5.01□□□□□ -1.61
SPR28YDR218C VHS3Q08438 674 aa5.01□□□□□ -1.61
SPR28YDR218C HFI1Q12060 488 aa5.01□□□□□ -1.61
SPR28YDR218C APM4Q99186 491 aa5.01□□□□□ -1.61
SPR28YDR218C RPC40P07703 335 aaKnown RBP5□□□□□ -1.61
SPR28YDR218C RPS21AP0C0V8 87 aaKnown RBP5□□□□□ -1.61
SPR28YDR218C YCL049CP25577 312 aa5□□□□□ -1.61
SPR28YDR218C HRR25P29295 494 aaKnown RBP5□□□□□ -1.61
SPR28YDR218C MDL1P33310 695 aa5□□□□□ -1.61
SPR28YDR218C SER1P33330 395 aaKnown RBP5□□□□□ -1.61
SPR28YDR218C OAF3P36023 863 aa5□□□□□ -1.61
SPR28YDR218C TAF5P38129 798 aa5□□□□□ -1.61
SPR28YDR218C TPA1P40032 644 aaKnown RBP5□□□□□ -1.61
SPR28YDR218C DPH1P40487 425 aaKnown RBP5□□□□□ -1.61
SPR28YDR218C YIL092WP40497 633 aa5□□□□□ -1.61
SPR28YDR218C NCS6P53088 359 aa5□□□□□ -1.61
SPR28YDR218C OGG1P53397 376 aaPredicted RBP5□□□□□ -1.61
SPR28YDR218C YNR061CP53747 219 aa5□□□□□ -1.61
SPR28YDR218C NCS2P53923 493 aaPredicted RBP5□□□□□ -1.61
SPR28YDR218C RPT6Q01939 405 aaKnown RBP5□□□□□ -1.61
SPR28YDR218C RMT2Q03305 412 aa5□□□□□ -1.61
SPR28YDR218C OMS1Q06668 471 aa5□□□□□ -1.61
SPR28YDR218C PSF3Q12146 194 aa5□□□□□ -1.61
SPR28YDR218C ZRT2Q12436 422 aa5□□□□□ -1.61
SPR28YDR218C SNF1P06782 633 aaKnown RBP4.99□□□□□ -1.61
SPR28YDR218C FUM1P08417 488 aaKnown RBP4.99□□□□□ -1.61
SPR28YDR218C MIS1P09440 975 aaKnown RBP4.99□□□□□ -1.61
SPR28YDR218C MTF2P10849 440 aa4.99□□□□□ -1.61
SPR28YDR218C CKA1P15790 372 aa4.99□□□□□ -1.61
SPR28YDR218C SEC65P29478 273 aa4.99□□□□□ -1.61
SPR28YDR218C CCR4P31384 837 aaKnown RBP4.99□□□□□ -1.61
SPR28YDR218C YKR075CP36155 307 aa4.99□□□□□ -1.61
SPR28YDR218C FTH1P38310 465 aa4.99□□□□□ -1.61
SPR28YDR218C GDI1P39958 451 aaKnown RBP4.99□□□□□ -1.61
SPR28YDR218C MAM1P40065 302 aa4.99□□□□□ -1.61
SPR28YDR218C YJL068CP40363 299 aa4.99□□□□□ -1.61
SPR28YDR218C URM1P40554 99 aaPredicted RBP4.99□□□□□ -1.61
SPR28YDR218C PSP2P50109 593 aaKnown RBP4.99□□□□□ -1.61
SPR28YDR218C UBC9P50623 157 aaPredicted RBP4.99□□□□□ -1.61
SPR28YDR218C ARC35P53731 342 aaKnown RBP4.99□□□□□ -1.61
SPR28YDR218C YPL071CQ02864 156 aa4.99□□□□□ -1.61
SPR28YDR218C YMR155WQ03795 547 aa4.99□□□□□ -1.61
SPR28YDR218C MFB1Q04922 465 aa4.99□□□□□ -1.61
SPR28YDR218C UTP21Q06078 939 aaPredicted RBP4.99□□□□□ -1.61
SPR28YDR218C YDL073WQ07454 984 aa4.99□□□□□ -1.61
SPR28YDR218C MCH5Q08777 521 aa4.99□□□□□ -1.61
SPR28YDR218C DCS2Q12123 353 aa4.99□□□□□ -1.61
SPR28YDR218C SAC3P46674 1301 aa4.98□□□□□ -1.61
SPR28YDR218C PHO5P00635 467 aa4.98□□□□□ -1.61
SPR28YDR218C GCN4P03069 281 aa4.98□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 20.1 ms