RNA–Protein interactions for RNA: YDR164C

SEC1, Transcript of Sm-like protein involved in docking and fusion of exocytic vesicles, yeastyeast

Gene SEC1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Cellular bud .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC1YDR164C ELF1P36053 145 aa1.06□□□□□ -2.24
SEC1YDR164C CFD1P40558 293 aa1.06□□□□□ -2.24
SEC1YDR164C YIR016WP40572 265 aa1.06□□□□□ -2.24
SEC1YDR164C VBA4Q04602 768 aaKnown RBP1.06□□□□□ -2.24
SEC1YDR164C YDR338CQ05497 695 aa1.06□□□□□ -2.24
SEC1YDR164C SEC6P32844 805 aa1.06□□□□□ -2.24
SEC1YDR164C LOT5P34234 306 aa1.06□□□□□ -2.24
SEC1YDR164C YKR018CP36114 725 aa1.06□□□□□ -2.24
SEC1YDR164C MRPL7P36519 292 aa1.06□□□□□ -2.24
SEC1YDR164C FUN12P39730 1002 aaKnown RBP1.06□□□□□ -2.24
SEC1YDR164C DOT6P40059 670 aaKnown RBP1.06□□□□□ -2.24
SEC1YDR164C YIL024CP40543 189 aa1.06□□□□□ -2.24
SEC1YDR164C MDV1P47025 714 aa1.06□□□□□ -2.24
SEC1YDR164C BFA1P47113 574 aa1.06□□□□□ -2.24
SEC1YDR164C NNF1P47149 201 aa1.06□□□□□ -2.24
SEC1YDR164C DOS2P54858 310 aa1.06□□□□□ -2.24
SEC1YDR164C MFM1Q02783 413 aa1.06□□□□□ -2.24
SEC1YDR164C YPL071CQ02864 156 aa1.06□□□□□ -2.24
SEC1YDR164C FPR4Q06205 392 aaPredicted RBP1.06□□□□□ -2.24
SEC1YDR164C TPO3Q06451 622 aa1.06□□□□□ -2.24
SEC1YDR164C ISA1Q07821 250 aaPredicted RBP1.06□□□□□ -2.24
SEC1YDR164C RDL1Q12305 139 aaKnown RBP1.06□□□□□ -2.24
SEC1YDR164C SSN2P38931 1420 aa1.05□□□□□ -2.24
SEC1YDR164C SPA2P23201 1466 aaKnown RBP1.05□□□□□ -2.24
SEC1YDR164C YKR075CP36155 307 aa1.05□□□□□ -2.24
SEC1YDR164C YBR139WP38109 508 aa1.05□□□□□ -2.24
SEC1YDR164C BRN1P38170 754 aa1.05□□□□□ -2.24
SEC1YDR164C TIM54P47045 478 aa1.05□□□□□ -2.24
SEC1YDR164C YJL049WP47048 450 aa1.05□□□□□ -2.24
SEC1YDR164C SNP1Q00916 300 aaPredicted RBP1.05□□□□□ -2.24
SEC1YDR164C FCP1Q03254 732 aa1.05□□□□□ -2.24
SEC1YDR164C TAF8Q03750 510 aa1.05□□□□□ -2.24
SEC1YDR164C IZH3Q07959 543 aa1.05□□□□□ -2.24
SEC1YDR164C SSF2Q12153 453 aaPredicted RBP1.05□□□□□ -2.24
SEC1YDR164C UBX3Q12229 455 aa1.05□□□□□ -2.24
SEC1YDR164C YOL098CQ12496 1037 aa1.05□□□□□ -2.24
SEC1YDR164C SKI3P17883 1432 aaKnown RBP1.04□□□□□ -2.24
SEC1YDR164C AQY1P0CD91 305 aa1.04□□□□□ -2.24
SEC1YDR164C RAD4P14736 754 aa1.04□□□□□ -2.24
SEC1YDR164C GAL11P19659 1081 aa1.04□□□□□ -2.24
SEC1YDR164C GSY1P23337 708 aa1.04□□□□□ -2.24
SEC1YDR164C YOX1P34161 385 aa1.04□□□□□ -2.24
SEC1YDR164C SCO2P38072 301 aa1.04□□□□□ -2.24
SEC1YDR164C PPE1P38796 400 aa1.04□□□□□ -2.24
SEC1YDR164C VRG4P40107 337 aa1.04□□□□□ -2.24
SEC1YDR164C YNL195CP40168 261 aa1.04□□□□□ -2.24
SEC1YDR164C SAD1P43589 448 aa1.04□□□□□ -2.24
SEC1YDR164C IRC7P43623 340 aa1.04□□□□□ -2.24
SEC1YDR164C TY4A-JP47023 414 aa1.04□□□□□ -2.24
SEC1YDR164C SNF12P53628 566 aa1.04□□□□□ -2.24
SEC1YDR164C NHX1Q04121 633 aa1.04□□□□□ -2.24
SEC1YDR164C VHS3Q08438 674 aa1.04□□□□□ -2.24
SEC1YDR164C Q0142Q9ZZW4 58 aa1.04□□□□□ -2.24
SEC1YDR164C GSY2P27472 705 aa1.04□□□□□ -2.24
SEC1YDR164C DHR2P36009 735 aaPredicted RBP1.04□□□□□ -2.24
SEC1YDR164C NMD2P38798 1089 aaKnown RBP1.04□□□□□ -2.24
SEC1YDR164C OAF1P39720 1047 aaPredicted RBP1.04□□□□□ -2.24
SEC1YDR164C SKP2P42843 763 aa1.04□□□□□ -2.24
SEC1YDR164C YIP4P53093 235 aa1.04□□□□□ -2.24
SEC1YDR164C RNH70P53331 553 aa1.04□□□□□ -2.24
SEC1YDR164C PPN1Q04119 674 aa1.04□□□□□ -2.24
SEC1YDR164C NSE3Q05541 303 aa1.04□□□□□ -2.24
SEC1YDR164C NRT1Q08485 598 aa1.04□□□□□ -2.24
SEC1YDR164C PET127P32606 800 aa1.03□□□□□ -2.24
SEC1YDR164C YKL091CP33324 310 aaKnown RBP1.03□□□□□ -2.24
SEC1YDR164C MTC2P34246 357 aa1.03□□□□□ -2.24
SEC1YDR164C YKR051WP36142 418 aa1.03□□□□□ -2.24
SEC1YDR164C AKL1P38080 1108 aaKnown RBP1.03□□□□□ -2.24
SEC1YDR164C BUD6P41697 788 aa1.03□□□□□ -2.24
SEC1YDR164C COP1P53622 1201 aaKnown RBP1.03□□□□□ -2.24
SEC1YDR164C ARP4P80428 489 aa1.03□□□□□ -2.24
SEC1YDR164C XRN1P22147 1528 aaKnown RBP1.03□□□□□ -2.24
SEC1YDR164C YMR085WP0CF18 432 aa1.03□□□□□ -2.25
SEC1YDR164C YEL076C-AP0CX16 216 aa1.03□□□□□ -2.25
SEC1YDR164C YLR464WP0CX17 216 aa1.03□□□□□ -2.25
SEC1YDR164C PRP16P15938 1071 aaPredicted RBP1.03□□□□□ -2.25
SEC1YDR164C CNE1P27825 502 aa1.03□□□□□ -2.25
SEC1YDR164C MSS1P32559 526 aaPredicted RBP1.03□□□□□ -2.25
SEC1YDR164C PPG1P32838 368 aa1.03□□□□□ -2.25
SEC1YDR164C MCD4P36051 919 aa1.03□□□□□ -2.25
SEC1YDR164C PBP2P38151 413 aaKnown RBP RIP-Chip data1.03□□□□□ -2.25not detected
SEC1YDR164C EXO1P39875 702 aa1.03□□□□□ -2.25
SEC1YDR164C YEL076CP39971 216 aa1.03□□□□□ -2.25
SEC1YDR164C CAF16P43569 289 aa1.03□□□□□ -2.25
SEC1YDR164C BIT61P47041 543 aa1.03□□□□□ -2.25
SEC1YDR164C ALG12P53730 551 aa1.03□□□□□ -2.25
SEC1YDR164C RPN4Q03465 531 aa1.03□□□□□ -2.25
SEC1YDR164C SPN1Q06505 410 aaPredicted RBP1.03□□□□□ -2.25
SEC1YDR164C DSE3Q08729 430 aa1.03□□□□□ -2.25
SEC1YDR164C FLC1Q08967 793 aa1.03□□□□□ -2.25
SEC1YDR164C PUF2Q12221 1075 aaKnown RBP RIP-Chip data1.03□□□□□ -2.25not detected
SEC1YDR164C LEU2P04173 364 aaPredicted RBP1.02□□□□□ -2.25
SEC1YDR164C FRS1P15624 595 aaKnown RBP1.02□□□□□ -2.25
SEC1YDR164C STI1P15705 589 aaKnown RBP RIP-Chip data1.02□□□□□ -2.25not detected
SEC1YDR164C RRP14P36080 434 aaKnown RBP1.02□□□□□ -2.25
SEC1YDR164C BST1P43571 1029 aa1.02□□□□□ -2.25
SEC1YDR164C LYS20P48570 428 aaKnown RBP1.02□□□□□ -2.25
SEC1YDR164C WAR1Q03631 944 aa1.02□□□□□ -2.25
SEC1YDR164C SMA2Q04658 369 aa1.02□□□□□ -2.25
SEC1YDR164C YLR281CQ05863 155 aa1.02□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 25.4 ms