RNA–Protein interactions for RNA: YDR139C

RUB1, Transcript of Ubiquitin-like protein with similarity to mammalian NEDD8, yeastyeast

Gene RUB1, Length 234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUB1YDR139C SRP68P38687 599 aaKnown RBP4.44□□□□□ -1.7
RUB1YDR139C YHR097CP38809 366 aaKnown RBP4.44□□□□□ -1.7
RUB1YDR139C PEA2P40091 420 aa4.44□□□□□ -1.7
RUB1YDR139C CCT7P42943 550 aaKnown RBP4.44□□□□□ -1.7
RUB1YDR139C PEX14P53112 341 aa4.44□□□□□ -1.7
RUB1YDR139C IZH3Q07959 543 aa4.44□□□□□ -1.7
RUB1YDR139C NGL1Q08213 363 aaKnown RBP4.44□□□□□ -1.7
RUB1YDR139C BMS1Q08965 1183 aaKnown RBP4.44□□□□□ -1.7
RUB1YDR139C HEM12P32347 362 aaPredicted RBP4.43□□□□□ -1.7
RUB1YDR139C TFC4P33339 1025 aa4.43□□□□□ -1.7
RUB1YDR139C GMH1P36125 273 aa4.43□□□□□ -1.7
RUB1YDR139C APL3P38065 1025 aa4.43□□□□□ -1.7
RUB1YDR139C UBS1P38290 277 aa4.43□□□□□ -1.7
RUB1YDR139C KSP1P38691 1029 aaKnown RBP4.43□□□□□ -1.7
RUB1YDR139C TMN3P40071 706 aa4.43□□□□□ -1.7
RUB1YDR139C FTR1P40088 404 aa4.43□□□□□ -1.7
RUB1YDR139C VPS73P53142 486 aaKnown RBP4.43□□□□□ -1.7
RUB1YDR139C PEX15Q08215 383 aa4.43□□□□□ -1.7
RUB1YDR139C AIM41Q12032 185 aa4.43□□□□□ -1.7
RUB1YDR139C MSL5Q12186 476 aaKnown RBP RIP-Chip data4.43□□□□□ -1.7not detected
RUB1YDR139C TUP1P16649 713 aa4.42□□□□□ -1.7
RUB1YDR139C KCC4P25389 1037 aa4.42□□□□□ -1.7
RUB1YDR139C PLC1P32383 869 aa4.42□□□□□ -1.7
RUB1YDR139C TDP1P38319 544 aa4.42□□□□□ -1.7
RUB1YDR139C ENP1P38333 483 aaKnown RBP4.42□□□□□ -1.7
RUB1YDR139C CRG1P38892 291 aaRIP-Chip data4.42□□□□□ -1.7not detected
RUB1YDR139C HOL1P53389 586 aa4.42□□□□□ -1.7
RUB1YDR139C SQS1P53866 767 aaKnown RBP4.42□□□□□ -1.7
RUB1YDR139C RKI1Q12189 258 aa4.42□□□□□ -1.7
RUB1YDR139C YEL076C-AP0CX16 216 aa4.41□□□□□ -1.7
RUB1YDR139C YLR464WP0CX17 216 aa4.41□□□□□ -1.7
RUB1YDR139C HMG2P12684 1045 aa4.41□□□□□ -1.7
RUB1YDR139C MTC7P32633 139 aa4.41□□□□□ -1.7
RUB1YDR139C TOM20P35180 183 aa4.41□□□□□ -1.7
RUB1YDR139C CDS1P38221 457 aa4.41□□□□□ -1.7
RUB1YDR139C YEL076CP39971 216 aa4.41□□□□□ -1.7
RUB1YDR139C NMA2P53204 395 aa4.41□□□□□ -1.7
RUB1YDR139C YML122CQ03207 126 aa4.41□□□□□ -1.7
RUB1YDR139C UFO1Q04511 668 aa4.41□□□□□ -1.7
RUB1YDR139C PHM6Q05637 104 aa4.41□□□□□ -1.7
RUB1YDR139C YCG1Q06680 1035 aa4.41□□□□□ -1.7
RUB1YDR139C TUF1P02992 437 aaKnown RBP4.4□□□□□ -1.71
RUB1YDR139C ELF1P36053 145 aa4.4□□□□□ -1.71
RUB1YDR139C IRC5P43610 853 aa4.4□□□□□ -1.71
RUB1YDR139C TAH11P47112 604 aa4.4□□□□□ -1.71
RUB1YDR139C DIP5P53388 608 aa4.4□□□□□ -1.71
RUB1YDR139C SPC98P53540 846 aa4.4□□□□□ -1.71
RUB1YDR139C TIM50Q02776 476 aa4.4□□□□□ -1.71
RUB1YDR139C CEF1Q03654 590 aaPredicted RBP4.4□□□□□ -1.71
RUB1YDR139C ECM38Q05902 660 aaPredicted RBP4.4□□□□□ -1.71
RUB1YDR139C CWC2Q12046 339 aaPredicted RBP4.4□□□□□ -1.71
RUB1YDR139C VPS5Q92331 675 aa4.4□□□□□ -1.71
RUB1YDR139C LAM4P38800 1345 aa4.4□□□□□ -1.71
RUB1YDR139C PPE1P38796 400 aa4.39□□□□□ -1.71
RUB1YDR139C YIL166CP40445 542 aa4.39□□□□□ -1.71
RUB1YDR139C YGR054WP53235 642 aaKnown RBP4.39□□□□□ -1.71
RUB1YDR139C PEF1P53238 335 aa4.39□□□□□ -1.71
RUB1YDR139C SNF12P53628 566 aa4.39□□□□□ -1.71
RUB1YDR139C DAK1P54838 584 aaKnown RBP4.39□□□□□ -1.71
RUB1YDR139C MTD1Q02046 320 aaKnown RBP4.39□□□□□ -1.71
RUB1YDR139C DHR2P36009 735 aaPredicted RBP4.38□□□□□ -1.71
RUB1YDR139C YEL025CP39991 1188 aa4.38□□□□□ -1.71
RUB1YDR139C THI6P41835 540 aa4.38□□□□□ -1.71
RUB1YDR139C PMT6P42934 759 aa4.38□□□□□ -1.71
RUB1YDR139C YOR378WQ08902 515 aa4.38□□□□□ -1.71
RUB1YDR139C SLX4Q12098 748 aa4.38□□□□□ -1.71
RUB1YDR139C RPN13O13563 156 aa4.37□□□□□ -1.71
RUB1YDR139C CWH43P25618 953 aa4.37□□□□□ -1.71
RUB1YDR139C EMP70P32802 667 aa4.37□□□□□ -1.71
RUB1YDR139C RMA1P36001 430 aaKnown RBP4.37□□□□□ -1.71
RUB1YDR139C MRPL7P36519 292 aa4.37□□□□□ -1.71
RUB1YDR139C EHT1P38295 451 aa4.37□□□□□ -1.71
RUB1YDR139C MUP3P38734 546 aa4.37□□□□□ -1.71
RUB1YDR139C STL1P39932 569 aa4.37□□□□□ -1.71
RUB1YDR139C EAF5P39995 279 aa4.37□□□□□ -1.71
RUB1YDR139C YDL183CP48569 320 aa4.37□□□□□ -1.71
RUB1YDR139C APM1Q00776 475 aaPredicted RBP4.37□□□□□ -1.71
RUB1YDR139C NGL2Q03264 515 aaKnown RBP4.37□□□□□ -1.71
RUB1YDR139C YDR179W-AQ03983 463 aa4.37□□□□□ -1.71
RUB1YDR139C SUT2Q12286 268 aa4.37□□□□□ -1.71
RUB1YDR139C MDM20Q12387 796 aaKnown RBP4.37□□□□□ -1.71
RUB1YDR139C TMA7Q3E764 64 aaKnown RBP4.37□□□□□ -1.71
RUB1YDR139C SPO11P23179 398 aa4.36□□□□□ -1.71
RUB1YDR139C YMC2P38087 329 aa4.36□□□□□ -1.71
RUB1YDR139C SSP120P39931 234 aaKnown RBP4.36□□□□□ -1.71
RUB1YDR139C YEL020CP39994 560 aa4.36□□□□□ -1.71
RUB1YDR139C LRO1P40345 661 aa4.36□□□□□ -1.71
RUB1YDR139C MFM1Q02783 413 aa4.36□□□□□ -1.71
RUB1YDR139C EFR3Q03653 782 aaKnown RBP4.36□□□□□ -1.71
RUB1YDR139C SEC12P11655 471 aa4.35□□□□□ -1.71
RUB1YDR139C GRX7P38068 203 aa4.35□□□□□ -1.71
RUB1YDR139C YJL193WP39542 402 aa4.35□□□□□ -1.71
RUB1YDR139C MIT1P40002 666 aa4.35□□□□□ -1.71
RUB1YDR139C MNT2P53059 558 aa4.35□□□□□ -1.71
RUB1YDR139C MDR1P53258 950 aa4.35□□□□□ -1.71
RUB1YDR139C YNL034WP53963 612 aa4.35□□□□□ -1.71
RUB1YDR139C YNL018CP53976 612 aa4.35□□□□□ -1.71
RUB1YDR139C ARR3Q06598 404 aa4.35□□□□□ -1.71
RUB1YDR139C PSF3Q12146 194 aa4.35□□□□□ -1.71
RUB1YDR139C PHO5P00635 467 aa4.34□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms