RNA–Protein interactions for RNA: YDR034C-D

YDR034C-D, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeast

Gene YDR034C-D, Length 5,313 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR034C-D	YDR034C-D	BFA1	P47113	574 aa		3.22	□□□□□ -1.89
YDR034C-D	YDR034C-D	OPT2	Q06593	877 aa		3.22	□□□□□ -1.89
YDR034C-D	YDR034C-D	CUE5	Q08412	411 aa	Known RBP	3.22	□□□□□ -1.89
YDR034C-D	YDR034C-D	YPL272C	Q08984	517 aa		3.22	□□□□□ -1.89
YDR034C-D	YDR034C-D	ARG3	P05150	338 aa		3.22	□□□□□ -1.89
YDR034C-D	YDR034C-D	POT1	P27796	417 aa	Known RBP RIP-Chip data	3.22	□□□□□ -1.89	not detected
YDR034C-D	YDR034C-D	RMA1	P36001	430 aa	Known RBP	3.22	□□□□□ -1.89
YDR034C-D	YDR034C-D	SDS22	P36047	338 aa		3.22	□□□□□ -1.89
YDR034C-D	YDR034C-D	SPO22	P40511	975 aa		3.22	□□□□□ -1.89
YDR034C-D	YDR034C-D	BUD8	P41698	603 aa		3.22	□□□□□ -1.89
YDR034C-D	YDR034C-D	VTI1	Q04338	217 aa		3.22	□□□□□ -1.89
YDR034C-D	YDR034C-D	TRI1	Q05024	226 aa		3.22	□□□□□ -1.89
YDR034C-D	YDR034C-D	AAD4	Q07747	329 aa		3.22	□□□□□ -1.89
YDR034C-D	YDR034C-D	AVO1	Q08236	1176 aa		3.22	□□□□□ -1.89
YDR034C-D	YDR034C-D	PUS7	Q08647	676 aa	Known RBP	3.22	□□□□□ -1.89
YDR034C-D	YDR034C-D	QCR6	P00127	147 aa		3.22	□□□□□ -1.89
YDR034C-D	YDR034C-D	PDC5	P16467	563 aa	Known RBP	3.22	□□□□□ -1.89
YDR034C-D	YDR034C-D	RRP7	P25368	297 aa	Predicted RBP	3.22	□□□□□ -1.89
YDR034C-D	YDR034C-D	UBP13	P38187	747 aa		3.22	□□□□□ -1.89
YDR034C-D	YDR034C-D	FUN12	P39730	1002 aa	Known RBP	3.22	□□□□□ -1.89
YDR034C-D	YDR034C-D	JEM1	P40358	645 aa		3.22	□□□□□ -1.89
YDR034C-D	YDR034C-D	CEP3	P40969	608 aa		3.22	□□□□□ -1.89
YDR034C-D	YDR034C-D	BTN2	P53286	410 aa		3.22	□□□□□ -1.89
YDR034C-D	YDR034C-D	ACS1	Q01574	713 aa		3.22	□□□□□ -1.89
YDR034C-D	YDR034C-D	DOT1	Q04089	582 aa	Known RBP	3.22	□□□□□ -1.89
YDR034C-D	YDR034C-D	CDA1	Q06702	301 aa		3.22	□□□□□ -1.89
YDR034C-D	YDR034C-D	YOR223W	Q12015	292 aa		3.22	□□□□□ -1.89
YDR034C-D	YDR034C-D	DUO1	P53168	247 aa	Known RBP	3.22	□□□□□ -1.89
YDR034C-D	YDR034C-D	DUS1	P53759	423 aa	Known RBP	3.22	□□□□□ -1.89
YDR034C-D	YDR034C-D	RRP36	Q12481	300 aa	Predicted RBP	3.22	□□□□□ -1.89
YDR034C-D	YDR034C-D	URA3	P03962	267 aa		3.21	□□□□□ -1.9
YDR034C-D	YDR034C-D	SRP72	P38688	640 aa	Known RBP	3.21	□□□□□ -1.9
YDR034C-D	YDR034C-D	YJL068C	P40363	299 aa		3.21	□□□□□ -1.9
YDR034C-D	YDR034C-D	ADY4	Q05955	493 aa		3.21	□□□□□ -1.9
YDR034C-D	YDR034C-D	PRP4	P20053	465 aa	Known RBP	3.21	□□□□□ -1.9
YDR034C-D	YDR034C-D	RIT1	P23796	513 aa		3.21	□□□□□ -1.9
YDR034C-D	YDR034C-D	ADK2	P26364	225 aa		3.21	□□□□□ -1.9
YDR034C-D	YDR034C-D	SAE2	P46946	345 aa		3.21	□□□□□ -1.9
YDR034C-D	YDR034C-D	TNA1	P53322	534 aa		3.21	□□□□□ -1.9
YDR034C-D	YDR034C-D	KEL3	Q08979	651 aa	Predicted RBP	3.21	□□□□□ -1.9
YDR034C-D	YDR034C-D	ICL2	Q12031	575 aa		3.21	□□□□□ -1.9
YDR034C-D	YDR034C-D	CMP2	P14747	604 aa		3.21	□□□□□ -1.9
YDR034C-D	YDR034C-D	FPS1	P23900	669 aa		3.21	□□□□□ -1.9
YDR034C-D	YDR034C-D	CAP1	P28495	268 aa	Known RBP	3.21	□□□□□ -1.9
YDR034C-D	YDR034C-D	PRE4	P30657	266 aa		3.21	□□□□□ -1.9
YDR034C-D	YDR034C-D	MRP20	P32387	263 aa		3.21	□□□□□ -1.9
YDR034C-D	YDR034C-D	TYE7	P33122	291 aa	Predicted RBP	3.21	□□□□□ -1.9
YDR034C-D	YDR034C-D	YIL166C	P40445	542 aa		3.21	□□□□□ -1.9
YDR034C-D	YDR034C-D	JJJ1	P53863	590 aa		3.21	□□□□□ -1.9
YDR034C-D	YDR034C-D	TY1A-MR1	Q04215	440 aa		3.21	□□□□□ -1.9
YDR034C-D	YDR034C-D	YLL054C	Q12244	843 aa		3.21	□□□□□ -1.9
YDR034C-D	YDR034C-D	YKL100C	P34248	587 aa		3.21	□□□□□ -1.9
YDR034C-D	YDR034C-D	CIT3	P43635	486 aa		3.21	□□□□□ -1.9
YDR034C-D	YDR034C-D	HST3	P53687	447 aa		3.21	□□□□□ -1.9
YDR034C-D	YDR034C-D	CSL4	P53859	292 aa	Predicted RBP	3.21	□□□□□ -1.9
YDR034C-D	YDR034C-D	PRP42	Q03776	544 aa	Known RBP	3.21	□□□□□ -1.9
YDR034C-D	YDR034C-D	VAM6	Q07468	1049 aa		3.21	□□□□□ -1.9
YDR034C-D	YDR034C-D	MDL2	P33311	773 aa		3.2	□□□□□ -1.9
YDR034C-D	YDR034C-D	SAS3	P34218	831 aa		3.2	□□□□□ -1.9
YDR034C-D	YDR034C-D	YFL052W	P43551	465 aa		3.2	□□□□□ -1.9
YDR034C-D	YDR034C-D	SUL2	Q12325	893 aa		3.2	□□□□□ -1.9
YDR034C-D	YDR034C-D	SEC21	P32074	935 aa	Known RBP	3.2	□□□□□ -1.9
YDR034C-D	YDR034C-D	PSF2	P40359	213 aa		3.2	□□□□□ -1.9
YDR034C-D	YDR034C-D	SGF73	P53165	657 aa		3.2	□□□□□ -1.9
YDR034C-D	YDR034C-D	GCR2	Q01722	534 aa		3.2	□□□□□ -1.9
YDR034C-D	YDR034C-D	TY1A-NL1	Q12391	440 aa	Known RBP	3.2	□□□□□ -1.9
YDR034C-D	YDR034C-D	PMS1	P14242	873 aa		3.2	□□□□□ -1.9
YDR034C-D	YDR034C-D	ARP2	P32381	391 aa	Known RBP	3.2	□□□□□ -1.9
YDR034C-D	YDR034C-D	GPT2	P36148	743 aa		3.2	□□□□□ -1.9
YDR034C-D	YDR034C-D	UBP2	Q01476	1272 aa		3.2	□□□□□ -1.9
YDR034C-D	YDR034C-D	HRK1	Q08732	759 aa	Known RBP	3.2	□□□□□ -1.9
YDR034C-D	YDR034C-D	PHM7	Q12252	991 aa		3.2	□□□□□ -1.9
YDR034C-D	YDR034C-D	TUB2	P02557	457 aa	Known RBP	3.2	□□□□□ -1.9
YDR034C-D	YDR034C-D	DGR2	P32330	852 aa		3.2	□□□□□ -1.9
YDR034C-D	YDR034C-D	ATP22	P50273	684 aa	Predicted RBP	3.2	□□□□□ -1.9
YDR034C-D	YDR034C-D	RAI1	P53063	387 aa	Known RBP	3.2	□□□□□ -1.9
YDR034C-D	YDR034C-D	BSC5	P53755	489 aa		3.2	□□□□□ -1.9
YDR034C-D	YDR034C-D	TGL5	Q12043	749 aa		3.2	□□□□□ -1.9
YDR034C-D	YDR034C-D	CET1	O13297	549 aa	Predicted RBP	3.19	□□□□□ -1.9
YDR034C-D	YDR034C-D	GPM1	P00950	247 aa	Known RBP	3.19	□□□□□ -1.9
YDR034C-D	YDR034C-D	CWH43	P25618	953 aa		3.19	□□□□□ -1.9
YDR034C-D	YDR034C-D	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	3.19	□□□□□ -1.9	not detected
YDR034C-D	YDR034C-D	PRC1	P00729	532 aa		3.19	□□□□□ -1.9
YDR034C-D	YDR034C-D	MIS1	P09440	975 aa	Known RBP	3.19	□□□□□ -1.9
YDR034C-D	YDR034C-D	GLY1	P37303	387 aa	Known RBP	3.19	□□□□□ -1.9
YDR034C-D	YDR034C-D	ATG14	P38270	344 aa		3.19	□□□□□ -1.9
YDR034C-D	YDR034C-D	CTF8	P38877	133 aa		3.19	□□□□□ -1.9
YDR034C-D	YDR034C-D	PRM2	P40534	656 aa		3.19	□□□□□ -1.9
YDR034C-D	YDR034C-D	SHR5	P41912	237 aa		3.19	□□□□□ -1.9
YDR034C-D	YDR034C-D	TIM11	P81449	96 aa	Predicted RBP	3.19	□□□□□ -1.9
YDR034C-D	YDR034C-D	YML119W	Q03208	357 aa		3.19	□□□□□ -1.9
YDR034C-D	YDR034C-D	SIZ1	Q04195	904 aa		3.19	□□□□□ -1.9
YDR034C-D	YDR034C-D	CTI6	Q08923	506 aa		3.19	□□□□□ -1.9
YDR034C-D	YDR034C-D	SPE4	Q12455	300 aa		3.19	□□□□□ -1.9
YDR034C-D	YDR034C-D	PFK2	P16862	959 aa	Known RBP RIP-Chip data	3.19	□□□□□ -1.9	not detected
YDR034C-D	YDR034C-D	MAE1	P36013	669 aa	Known RBP	3.19	□□□□□ -1.9
YDR034C-D	YDR034C-D	YHR218W	P38899	603 aa		3.19	□□□□□ -1.9
YDR034C-D	YDR034C-D	CIR1	P42940	261 aa		3.19	□□□□□ -1.9
YDR034C-D	YDR034C-D	PRO2	P54885	456 aa	Known RBP	3.19	□□□□□ -1.9
YDR034C-D	YDR034C-D	ADE12	P80210	433 aa	Known RBP	3.19	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 65.7 ms