RNA–Protein interactions for RNA: YDR008C

YDR008C, Transcript of Dubious open reading frame, yeastyeast

Gene YDR008C, Length 351 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR008CYDR008C MCD4P36051 919 aa3.27□□□□□ -1.89
YDR008CYDR008C GND1P38720 489 aaKnown RBP3.27□□□□□ -1.89
YDR008CYDR008C CFD1P40558 293 aa3.27□□□□□ -1.89
YDR008CYDR008C SET2P46995 733 aaKnown RBP3.27□□□□□ -1.89
YDR008CYDR008C YIP4P53093 235 aa3.27□□□□□ -1.89
YDR008CYDR008C PCL10P53124 433 aa3.27□□□□□ -1.89
YDR008CYDR008C COP1P53622 1201 aaKnown RBP3.27□□□□□ -1.89
YDR008CYDR008C RPN7Q06103 429 aaKnown RBP3.27□□□□□ -1.89
YDR008CYDR008C OSH2Q12451 1283 aa3.27□□□□□ -1.89
YDR008CYDR008C AIM44Q99299 758 aa3.27□□□□□ -1.89
YDR008CYDR008C YFL015CP43578 164 aa3.26□□□□□ -1.89
YDR008CYDR008C COQ6P53318 479 aa3.26□□□□□ -1.89
YDR008CYDR008C BRE5P53741 515 aaKnown RBP3.26□□□□□ -1.89
YDR008CYDR008C YPT7P32939 208 aa3.25□□□□□ -1.89
YDR008CYDR008C YKR018CP36114 725 aa3.25□□□□□ -1.89
YDR008CYDR008C FMP46P36141 133 aaKnown RBP3.25□□□□□ -1.89
YDR008CYDR008C APN2P38207 520 aa3.25□□□□□ -1.89
YDR008CYDR008C NAN1Q02931 896 aaKnown RBP3.25□□□□□ -1.89
YDR008CYDR008C ISA1Q07821 250 aaPredicted RBP3.25□□□□□ -1.89
YDR008CYDR008C NOP8Q08287 484 aaPredicted RBP3.25□□□□□ -1.89
YDR008CYDR008C AIM17P23180 465 aaKnown RBP3.24□□□□□ -1.89
YDR008CYDR008C YIL152WP40455 235 aa3.24□□□□□ -1.89
YDR008CYDR008C THI6P41835 540 aa3.24□□□□□ -1.89
YDR008CYDR008C MDV1P47025 714 aa3.24□□□□□ -1.89
YDR008CYDR008C RTA1P53047 317 aa3.24□□□□□ -1.89
YDR008CYDR008C GRS2Q06817 618 aa3.24□□□□□ -1.89
YDR008CYDR008C YMR084WA2P2R3 262 aa3.23□□□□□ -1.89
YDR008CYDR008C YIR016WP40572 265 aa3.23□□□□□ -1.89
YDR008CYDR008C TES1P41903 349 aaKnown RBP3.23□□□□□ -1.89
YDR008CYDR008C TPO3Q06451 622 aa3.23□□□□□ -1.89
YDR008CYDR008C MTC2P34246 357 aa3.22□□□□□ -1.89
YDR008CYDR008C HUL4P40985 892 aa3.22□□□□□ -1.89
YDR008CYDR008C BIT61P47041 543 aa3.22□□□□□ -1.89
YDR008CYDR008C YGR125WP53273 1036 aa3.22□□□□□ -1.89
YDR008CYDR008C YMR317WQ04893 1140 aa3.22□□□□□ -1.89
YDR008CYDR008C CNE1P27825 502 aa3.21□□□□□ -1.9
YDR008CYDR008C MTG2P38860 518 aa3.21□□□□□ -1.9
YDR008CYDR008C SAE2P46946 345 aa3.21□□□□□ -1.9
YDR008CYDR008C SMA2Q04658 369 aa3.21□□□□□ -1.9
YDR008CYDR008C WHI2P12611 486 aa3.2□□□□□ -1.9
YDR008CYDR008C RAD4P14736 754 aa3.2□□□□□ -1.9
YDR008CYDR008C SEC15P22224 910 aa3.2□□□□□ -1.9
YDR008CYDR008C RTT107P38850 1070 aa3.2□□□□□ -1.9
YDR008CYDR008C SKP2P42843 763 aa3.2□□□□□ -1.9
YDR008CYDR008C ZAP1P47043 880 aa3.2□□□□□ -1.9
YDR008CYDR008C BOP3P53958 396 aa3.2□□□□□ -1.9
YDR008CYDR008C SPN1Q06505 410 aaPredicted RBP3.2□□□□□ -1.9
YDR008CYDR008C RPN10P38886 268 aaKnown RBP3.19□□□□□ -1.9
YDR008CYDR008C HOS2P53096 452 aaPredicted RBP3.19□□□□□ -1.9
YDR008CYDR008C MFM1Q02783 413 aa3.18□□□□□ -1.9
YDR008CYDR008C YDL073WQ07454 984 aa3.18□□□□□ -1.9
YDR008CYDR008C TMN3P40071 706 aa3.17□□□□□ -1.9
YDR008CYDR008C IRC7P43623 340 aa3.17□□□□□ -1.9
YDR008CYDR008C BUD17P53727 317 aa3.17□□□□□ -1.9
YDR008CYDR008C ACO1P19414 778 aaKnown RBP RIP-Chip data3.16□□□□□ -1.9not detected
YDR008CYDR008C KIN82P25341 720 aa3.16□□□□□ -1.9
YDR008CYDR008C PPE1P38796 400 aa3.16□□□□□ -1.9
YDR008CYDR008C YPL071CQ02864 156 aa3.16□□□□□ -1.9
YDR008CYDR008C YMR034CQ05131 434 aaPredicted RBP3.16□□□□□ -1.9
YDR008CYDR008C RNR3P21672 869 aaKnown RBP3.15□□□□□ -1.91
YDR008CYDR008C EXO84P38261 753 aa3.15□□□□□ -1.91
YDR008CYDR008C TDA10P42938 290 aa3.15□□□□□ -1.91
YDR008CYDR008C SVF1Q05515 481 aa3.15□□□□□ -1.91
YDR008CYDR008C SSF2Q12153 453 aaPredicted RBP3.15□□□□□ -1.91
YDR008CYDR008C UBX3Q12229 455 aa3.15□□□□□ -1.91
YDR008CYDR008C SRP40P32583 406 aaPredicted RBP3.14□□□□□ -1.91
YDR008CYDR008C MNN4P36044 1178 aa3.14□□□□□ -1.91
YDR008CYDR008C YHR020WP38708 688 aaKnown RBP3.14□□□□□ -1.91
YDR008CYDR008C EFR3Q03653 782 aaKnown RBP3.14□□□□□ -1.91
YDR008CYDR008C DSE3Q08729 430 aa3.14□□□□□ -1.91
YDR008CYDR008C FRS1P15624 595 aaKnown RBP3.13□□□□□ -1.91
YDR008CYDR008C SSZ1P38788 538 aaKnown RBP3.13□□□□□ -1.91
YDR008CYDR008C YHR202WP38887 602 aa3.13□□□□□ -1.91
YDR008CYDR008C FAA2P39518 744 aa3.13□□□□□ -1.91
YDR008CYDR008C RCR2Q03446 210 aaKnown RBP3.13□□□□□ -1.91
YDR008CYDR008C COQ3P27680 312 aa3.12□□□□□ -1.91
YDR008CYDR008C RPT3P33298 428 aaKnown RBP3.12□□□□□ -1.91
YDR008CYDR008C SNP1Q00916 300 aaPredicted RBP3.12□□□□□ -1.91
YDR008CYDR008C VHS3Q08438 674 aa3.12□□□□□ -1.91
YDR008CYDR008C PCL8Q08966 492 aa3.12□□□□□ -1.91
YDR008CYDR008C DHH1P39517 506 aaKnown RBP3.11□□□□□ -1.91
YDR008CYDR008C TIM54P47045 478 aa3.11□□□□□ -1.91
YDR008CYDR008C RPS15Q01855 142 aaKnown RBP3.11□□□□□ -1.91
YDR008CYDR008C YPL216WQ08964 1102 aa3.11□□□□□ -1.91
YDR008CYDR008C FLC1Q08967 793 aa3.11□□□□□ -1.91
YDR008CYDR008C GAL4P04386 881 aa3.1□□□□□ -1.91
YDR008CYDR008C CAN1P04817 590 aa3.1□□□□□ -1.91
YDR008CYDR008C STO1P34160 861 aaKnown RBP3.1□□□□□ -1.91
YDR008CYDR008C HRD3Q05787 833 aa3.1□□□□□ -1.91
YDR008CYDR008C YIL169CP40442 995 aa3.09□□□□□ -1.91
YDR008CYDR008C AZF1P41696 914 aa3.09□□□□□ -1.91
YDR008CYDR008C SAP4P53036 818 aa3.09□□□□□ -1.91
YDR008CYDR008C TIM50Q02776 476 aa3.09□□□□□ -1.91
YDR008CYDR008C WAR1Q03631 944 aa3.09□□□□□ -1.91
YDR008CYDR008C NHX1Q04121 633 aa3.09□□□□□ -1.91
YDR008CYDR008C ATX2Q12067 313 aa3.09□□□□□ -1.91
YDR008CYDR008C YJU2P28320 278 aaPredicted RBP3.08□□□□□ -1.92
YDR008CYDR008C PET127P32606 800 aa3.08□□□□□ -1.92
YDR008CYDR008C YPT10P38146 199 aa3.08□□□□□ -1.92
YDR008CYDR008C NUG1P40010 520 aaKnown RBP3.08□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms