RNA–Protein interactions for RNA: YBR161W

CSH1, Transcript of Mannosylinositol phosphorylceramide (MIPC) synthase catalytic subunit, yeast

Gene CSH1, Length 1,131 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSH1	YBR161W	KSP1	P38691	1029 aa	Known RBP	5.02	□□□□□ -1.61
CSH1	YBR161W	CRG1	P38892	291 aa	RIP-Chip data	5.02	□□□□□ -1.61	not detected
CSH1	YBR161W	CCT7	P42943	550 aa	Known RBP	5.02	□□□□□ -1.61
CSH1	YBR161W	SQS1	P53866	767 aa	Known RBP	5.02	□□□□□ -1.61
CSH1	YBR161W	FDC1	Q03034	503 aa		5.02	□□□□□ -1.61
CSH1	YBR161W	PHM6	Q05637	104 aa		5.02	□□□□□ -1.61
CSH1	YBR161W	GFA1	P14742	717 aa	Known RBP	5.01	□□□□□ -1.61
CSH1	YBR161W	MSS1	P32559	526 aa	Predicted RBP	5.01	□□□□□ -1.61
CSH1	YBR161W	ELF1	P36053	145 aa		5.01	□□□□□ -1.61
CSH1	YBR161W	GMH1	P36125	273 aa		5.01	□□□□□ -1.61
CSH1	YBR161W	APL3	P38065	1025 aa		5.01	□□□□□ -1.61
CSH1	YBR161W	TDP1	P38319	544 aa		5.01	□□□□□ -1.61
CSH1	YBR161W	SRP68	P38687	599 aa	Known RBP	5.01	□□□□□ -1.61
CSH1	YBR161W	TMN3	P40071	706 aa		5.01	□□□□□ -1.61
CSH1	YBR161W	FTR1	P40088	404 aa		5.01	□□□□□ -1.61
CSH1	YBR161W	NMA2	P53204	395 aa		5.01	□□□□□ -1.61
CSH1	YBR161W	TIM50	Q02776	476 aa		5.01	□□□□□ -1.61
CSH1	YBR161W	HLR1	Q04429	423 aa		5.01	□□□□□ -1.61
CSH1	YBR161W	ECM38	Q05902	660 aa	Predicted RBP	5.01	□□□□□ -1.61
CSH1	YBR161W	PEX15	Q08215	383 aa		5.01	□□□□□ -1.61
CSH1	YBR161W	AIM41	Q12032	185 aa		5.01	□□□□□ -1.61
CSH1	YBR161W	TAF3	Q12297	353 aa		5.01	□□□□□ -1.61
CSH1	YBR161W	HMG2	P12684	1045 aa		5	□□□□□ -1.61
CSH1	YBR161W	KCC4	P25389	1037 aa		5	□□□□□ -1.61
CSH1	YBR161W	HEM12	P32347	362 aa	Predicted RBP	5	□□□□□ -1.61
CSH1	YBR161W	QRI1	P43123	477 aa	Known RBP	5	□□□□□ -1.61
CSH1	YBR161W	VPS73	P53142	486 aa	Known RBP	5	□□□□□ -1.61
CSH1	YBR161W	DIP5	P53388	608 aa		5	□□□□□ -1.61
CSH1	YBR161W	HOL1	P53389	586 aa		5	□□□□□ -1.61
CSH1	YBR161W	SPC98	P53540	846 aa		5	□□□□□ -1.61
CSH1	YBR161W	YCG1	Q06680	1035 aa		5	□□□□□ -1.61
CSH1	YBR161W	IZH3	Q07959	543 aa		5	□□□□□ -1.61
CSH1	YBR161W	CWC2	Q12046	339 aa	Predicted RBP	5	□□□□□ -1.61
CSH1	YBR161W	RKI1	Q12189	258 aa		5	□□□□□ -1.61
CSH1	YBR161W	LAM4	P38800	1345 aa		4.99	□□□□□ -1.61
CSH1	YBR161W	YEL076C-A	P0CX16	216 aa		4.99	□□□□□ -1.61
CSH1	YBR161W	YLR464W	P0CX17	216 aa		4.99	□□□□□ -1.61
CSH1	YBR161W	UBS1	P38290	277 aa		4.99	□□□□□ -1.61
CSH1	YBR161W	YEL076C	P39971	216 aa		4.99	□□□□□ -1.61
CSH1	YBR161W	MTD1	Q02046	320 aa	Known RBP	4.99	□□□□□ -1.61
CSH1	YBR161W	BMS1	Q08965	1183 aa	Known RBP	4.99	□□□□□ -1.61
CSH1	YBR161W	MTC7	P32633	139 aa		4.98	□□□□□ -1.61
CSH1	YBR161W	CDS1	P38221	457 aa		4.98	□□□□□ -1.61
CSH1	YBR161W	PPE1	P38796	400 aa		4.98	□□□□□ -1.61
CSH1	YBR161W	EAF5	P39995	279 aa		4.98	□□□□□ -1.61
CSH1	YBR161W	PMT6	P42934	759 aa		4.98	□□□□□ -1.61
CSH1	YBR161W	UFO1	Q04511	668 aa		4.98	□□□□□ -1.61
CSH1	YBR161W	GRX7	P38068	203 aa		4.97	□□□□□ -1.61
CSH1	YBR161W	EHT1	P38295	451 aa		4.97	□□□□□ -1.61
CSH1	YBR161W	YEL025C	P39991	1188 aa		4.97	□□□□□ -1.61
CSH1	YBR161W	IRC5	P43610	853 aa		4.97	□□□□□ -1.61
CSH1	YBR161W	YGR054W	P53235	642 aa	Known RBP	4.97	□□□□□ -1.61
CSH1	YBR161W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.97	□□□□□ -1.61	not detected
CSH1	YBR161W	VPS5	Q92331	675 aa		4.97	□□□□□ -1.61
CSH1	YBR161W	PEF1	P53238	335 aa		4.96	□□□□□ -1.62
CSH1	YBR161W	MDR1	P53258	950 aa		4.96	□□□□□ -1.62
CSH1	YBR161W	SNF12	P53628	566 aa		4.96	□□□□□ -1.62
CSH1	YBR161W	YOR378W	Q08902	515 aa		4.96	□□□□□ -1.62
CSH1	YBR161W	SLX4	Q12098	748 aa		4.96	□□□□□ -1.62
CSH1	YBR161W	RMA1	P36001	430 aa	Known RBP	4.95	□□□□□ -1.62
CSH1	YBR161W	DHR2	P36009	735 aa	Predicted RBP	4.95	□□□□□ -1.62
CSH1	YBR161W	MRPL7	P36519	292 aa		4.95	□□□□□ -1.62
CSH1	YBR161W	STL1	P39932	569 aa		4.95	□□□□□ -1.62
CSH1	YBR161W	YIL166C	P40445	542 aa		4.95	□□□□□ -1.62
CSH1	YBR161W	TAH11	P47112	604 aa		4.95	□□□□□ -1.62
CSH1	YBR161W	YNL034W	P53963	612 aa		4.95	□□□□□ -1.62
CSH1	YBR161W	YNL018C	P53976	612 aa		4.95	□□□□□ -1.62
CSH1	YBR161W	MFM1	Q02783	413 aa		4.95	□□□□□ -1.62
CSH1	YBR161W	CEF1	Q03654	590 aa	Predicted RBP	4.95	□□□□□ -1.62
CSH1	YBR161W	TRS23	Q03784	219 aa		4.95	□□□□□ -1.62
CSH1	YBR161W	SND1	Q04007	877 aa		4.95	□□□□□ -1.62
CSH1	YBR161W	MDM20	Q12387	796 aa	Known RBP	4.95	□□□□□ -1.62
CSH1	YBR161W	TMA7	Q3E764	64 aa	Known RBP	4.95	□□□□□ -1.62
CSH1	YBR161W	TUF1	P02992	437 aa	Known RBP	4.94	□□□□□ -1.62
CSH1	YBR161W	SPO11	P23179	398 aa		4.94	□□□□□ -1.62
CSH1	YBR161W	MUP3	P38734	546 aa		4.94	□□□□□ -1.62
CSH1	YBR161W	THI6	P41835	540 aa		4.94	□□□□□ -1.62
CSH1	YBR161W	YDL183C	P48569	320 aa		4.94	□□□□□ -1.62
CSH1	YBR161W	MNT2	P53059	558 aa		4.94	□□□□□ -1.62
CSH1	YBR161W	DAK1	P54838	584 aa	Known RBP	4.94	□□□□□ -1.62
CSH1	YBR161W	NGL2	Q03264	515 aa	Known RBP	4.94	□□□□□ -1.62
CSH1	YBR161W	YDR179W-A	Q03983	463 aa		4.94	□□□□□ -1.62
CSH1	YBR161W	PSF3	Q12146	194 aa		4.94	□□□□□ -1.62
CSH1	YBR161W	SEC12	P11655	471 aa		4.93	□□□□□ -1.62
CSH1	YBR161W	STE12	P13574	688 aa		4.93	□□□□□ -1.62
CSH1	YBR161W	CWH43	P25618	953 aa		4.93	□□□□□ -1.62
CSH1	YBR161W	PEX8	P53248	589 aa		4.93	□□□□□ -1.62
CSH1	YBR161W	EFR3	Q03653	782 aa	Known RBP	4.93	□□□□□ -1.62
CSH1	YBR161W	SUT2	Q12286	268 aa		4.93	□□□□□ -1.62
CSH1	YBR161W	RPN13	O13563	156 aa		4.92	□□□□□ -1.62
CSH1	YBR161W	PHO3	P24031	467 aa		4.92	□□□□□ -1.62
CSH1	YBR161W	EMP70	P32802	667 aa		4.92	□□□□□ -1.62
CSH1	YBR161W	PPZ2	P33329	710 aa		4.92	□□□□□ -1.62
CSH1	YBR161W	YIL092W	P40497	633 aa		4.92	□□□□□ -1.62
CSH1	YBR161W	YIP4	P53093	235 aa		4.92	□□□□□ -1.62
CSH1	YBR161W	APM1	Q00776	475 aa	Predicted RBP	4.92	□□□□□ -1.62
CSH1	YBR161W	YPL216W	Q08964	1102 aa		4.92	□□□□□ -1.62
CSH1	YBR161W	NUR1	Q12066	484 aa		4.92	□□□□□ -1.62
CSH1	YBR161W	HOS1	Q12214	470 aa		4.92	□□□□□ -1.62
CSH1	YBR161W	MPD2	Q99316	277 aa		4.92	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 72.5 ms