RNA–Protein interactions for RNA: YAL030W

SNC1, Transcript of Vesicle membrane receptor protein (v-SNARE), yeastyeast

Gene SNC1, Length 354 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum, Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNC1YAL030W MAD3P47074 515 aa2.45□□□□□ -2.02
SNC1YAL030W CTH1P47976 325 aa2.45□□□□□ -2.02
SNC1YAL030W GCV2P49095 1034 aa2.45□□□□□ -2.02
SNC1YAL030W UBA2P52488 636 aa2.45□□□□□ -2.02
SNC1YAL030W IMA1P53051 589 aa2.45□□□□□ -2.02
SNC1YAL030W SQS1P53866 767 aaKnown RBP2.45□□□□□ -2.02
SNC1YAL030W YMR018WQ04364 514 aa2.45□□□□□ -2.02
SNC1YAL030W THI22Q06490 572 aa2.45□□□□□ -2.02
SNC1YAL030W HIM1Q06674 414 aa2.45□□□□□ -2.02
SNC1YAL030W AAD4Q07747 329 aa2.45□□□□□ -2.02
SNC1YAL030W TGL5Q12043 749 aa2.45□□□□□ -2.02
SNC1YAL030W DBP10Q12389 995 aaKnown RBP2.45□□□□□ -2.02
SNC1YAL030W POM34Q12445 299 aa2.45□□□□□ -2.02
SNC1YAL030W HRP1Q99383 534 aaKnown RBP2.45□□□□□ -2.02
SNC1YAL030W SOD2P00447 233 aa2.44□□□□□ -2.02
SNC1YAL030W LAT1P12695 482 aaKnown RBP2.44□□□□□ -2.02
SNC1YAL030W UBC1P21734 215 aaKnown RBP2.44□□□□□ -2.02
SNC1YAL030W MCM3P24279 971 aaKnown RBP2.44□□□□□ -2.02
SNC1YAL030W GFD2P25370 566 aaKnown RBP2.44□□□□□ -2.02
SNC1YAL030W CHS3P29465 1165 aa2.44□□□□□ -2.02
SNC1YAL030W MCM10P32354 571 aa2.44□□□□□ -2.02
SNC1YAL030W BEM3P32873 1128 aa2.44□□□□□ -2.02
SNC1YAL030W TSA1P34760 196 aaKnown RBP2.44□□□□□ -2.02
SNC1YAL030W POL12P38121 705 aaPredicted RBP2.44□□□□□ -2.02
SNC1YAL030W PLB1P39105 664 aa2.44□□□□□ -2.02
SNC1YAL030W GET2P40056 285 aa2.44□□□□□ -2.02
SNC1YAL030W FAF1P40546 346 aaPredicted RBP2.44□□□□□ -2.02
SNC1YAL030W YIR042CP40586 236 aa2.44□□□□□ -2.02
SNC1YAL030W SMK1P41808 388 aa2.44□□□□□ -2.02
SNC1YAL030W TAH11P47112 604 aa2.44□□□□□ -2.02
SNC1YAL030W SRB7P47822 140 aa2.44□□□□□ -2.02
SNC1YAL030W CTF18P49956 741 aa2.44□□□□□ -2.02
SNC1YAL030W AMA1P50082 593 aa2.44□□□□□ -2.02
SNC1YAL030W YRB30P53107 440 aaPredicted RBP2.44□□□□□ -2.02
SNC1YAL030W ERG5P54781 538 aa2.44□□□□□ -2.02
SNC1YAL030W MRPL13Q02204 264 aa2.44□□□□□ -2.02
SNC1YAL030W FDC1Q03034 503 aa2.44□□□□□ -2.02
SNC1YAL030W CTK1Q03957 528 aaKnown RBP2.44□□□□□ -2.02
SNC1YAL030W TFC6Q06339 672 aa2.44□□□□□ -2.02
SNC1YAL030W YCG1Q06680 1035 aa2.44□□□□□ -2.02
SNC1YAL030W IWR1Q07532 353 aaPredicted RBP2.44□□□□□ -2.02
SNC1YAL030W DIA2Q08496 732 aaPredicted RBP2.44□□□□□ -2.02
SNC1YAL030W HOS1Q12214 470 aa2.44□□□□□ -2.02
SNC1YAL030W CLF1Q12309 687 aaPredicted RBP2.44□□□□□ -2.02
SNC1YAL030W YOL087CQ99247 1116 aa2.44□□□□□ -2.02
SNC1YAL030W ECM3Q99252 613 aa2.44□□□□□ -2.02
SNC1YAL030W URA3P03962 267 aa2.43□□□□□ -2.02
SNC1YAL030W RPS9BP05755 195 aaKnown RBP2.43□□□□□ -2.02
SNC1YAL030W RPS13P05756 151 aaKnown RBP2.43□□□□□ -2.02
SNC1YAL030W TRP4P07285 380 aaPredicted RBP2.43□□□□□ -2.02
SNC1YAL030W NCP1P16603 691 aaKnown RBP2.43□□□□□ -2.02
SNC1YAL030W SEC15P22224 910 aa2.43□□□□□ -2.02
SNC1YAL030W ARG1P22768 420 aa2.43□□□□□ -2.02
SNC1YAL030W LIP5P32875 414 aa2.43□□□□□ -2.02
SNC1YAL030W JNM1P36224 373 aa2.43□□□□□ -2.02
SNC1YAL030W MRPL36P36531 177 aa2.43□□□□□ -2.02
SNC1YAL030W FSH1P38777 243 aaKnown RBP2.43□□□□□ -2.02
SNC1YAL030W LYS9P38999 446 aa2.43□□□□□ -2.02
SNC1YAL030W NUP60P39705 539 aa2.43□□□□□ -2.02
SNC1YAL030W FTR1P40088 404 aa2.43□□□□□ -2.02
SNC1YAL030W PUG1P40100 303 aa2.43□□□□□ -2.02
SNC1YAL030W YNL195CP40168 261 aa2.43□□□□□ -2.02
SNC1YAL030W TMA108P40462 946 aa2.43□□□□□ -2.02
SNC1YAL030W GSM1P42950 618 aa2.43□□□□□ -2.02
SNC1YAL030W BNA1P47096 177 aa2.43□□□□□ -2.02
SNC1YAL030W YDL183CP48569 320 aa2.43□□□□□ -2.02
SNC1YAL030W SPT20P50875 604 aa2.43□□□□□ -2.02
SNC1YAL030W RIM8P53179 542 aa2.43□□□□□ -2.02
SNC1YAL030W COX18P53239 316 aa2.43□□□□□ -2.02
SNC1YAL030W MRPS35P53292 345 aa2.43□□□□□ -2.02
SNC1YAL030W MEP3P53390 489 aa2.43□□□□□ -2.02
SNC1YAL030W ARA2Q04212 335 aa2.43□□□□□ -2.02
SNC1YAL030W ENT2Q05785 613 aa2.43□□□□□ -2.02
SNC1YAL030W VID22Q05934 901 aa2.43□□□□□ -2.02
SNC1YAL030W CSR1Q06705 408 aaKnown RBP2.43□□□□□ -2.02
SNC1YAL030W MCH5Q08777 521 aa2.43□□□□□ -2.02
SNC1YAL030W AIM41Q12032 185 aa2.43□□□□□ -2.02
SNC1YAL030W LEU2P04173 364 aaPredicted RBP2.42□□□□□ -2.02
SNC1YAL030W MET3P08536 511 aa2.42□□□□□ -2.02
SNC1YAL030W POL3P15436 1097 aa2.42□□□□□ -2.02
SNC1YAL030W TUP1P16649 713 aa2.42□□□□□ -2.02
SNC1YAL030W PRP28P23394 588 aa2.42□□□□□ -2.02
SNC1YAL030W CLB4P24871 460 aa2.42□□□□□ -2.02
SNC1YAL030W ERG6P25087 383 aaKnown RBP2.42□□□□□ -2.02
SNC1YAL030W DCG1P32460 244 aa2.42□□□□□ -2.02
SNC1YAL030W CBF2P32504 956 aa2.42□□□□□ -2.02
SNC1YAL030W PAH1P32567 862 aa2.42□□□□□ -2.02
SNC1YAL030W SLC1P33333 303 aa2.42□□□□□ -2.02
SNC1YAL030W RMA1P36001 430 aaKnown RBP2.42□□□□□ -2.02
SNC1YAL030W CDS1P38221 457 aa2.42□□□□□ -2.02
SNC1YAL030W YBR053CP38235 358 aa2.42□□□□□ -2.02
SNC1YAL030W CRG1P38892 291 aaRIP-Chip data2.42□□□□□ -2.02not detected
SNC1YAL030W NOP16P40007 231 aaKnown RBP2.42□□□□□ -2.02
SNC1YAL030W HOS4P40480 1083 aa2.42□□□□□ -2.02
SNC1YAL030W BST1P43571 1029 aa2.42□□□□□ -2.02
SNC1YAL030W INP52P50942 1183 aa2.42□□□□□ -2.02
SNC1YAL030W SAP4P53036 818 aa2.42□□□□□ -2.02
SNC1YAL030W MDM1Q01846 1127 aa2.42□□□□□ -2.02
SNC1YAL030W TRS31Q03337 283 aa2.42□□□□□ -2.02
SNC1YAL030W DLT1Q04216 342 aa2.42□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 52.7 ms