RNA–Protein interactions for RNA: ENST00000522414.1

PVT1-213, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 654 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-213ENST00000522414 LRP10Q7Z4F1 713 aa10.51□□□□□ -0.73
PVT1-213ENST00000522414 NYXQ9GZU5 481 aa10.51□□□□□ -0.73
PVT1-213ENST00000522414 MAP10Q9P2G4 905 aa10.51□□□□□ -0.73
PVT1-213ENST00000522414 LAS1LQ9Y4W2 734 aaKnown RBP10.51□□□□□ -0.73
PVT1-213ENST00000522414 UBN2Q6ZU65 1347 aa10.51□□□□□ -0.73
PVT1-213ENST00000522414 KRT76Q01546 638 aa10.5□□□□□ -0.73
PVT1-213ENST00000522414 AIMP1Q12904 312 aaKnown RBP10.5□□□□□ -0.73
PVT1-213ENST00000522414 CRY2Q49AN0 593 aa10.5□□□□□ -0.73
PVT1-213ENST00000522414 GIGYF2Q6Y7W6 1299 aaKnown RBP10.5□□□□□ -0.73
PVT1-213ENST00000522414 RTKN2Q8IZC4 609 aa10.5□□□□□ -0.73
PVT1-213ENST00000522414 JMYQ8N9B5 988 aa10.5□□□□□ -0.73
PVT1-213ENST00000522414 ADAMTS8Q9UP79 889 aa10.5□□□□□ -0.73
PVT1-213ENST00000522414 ABCC12Q96J65 1359 aa10.5□□□□□ -0.73
PVT1-213ENST00000522414 SPDYE5A6NIY4 337 aa10.49□□□□□ -0.73
PVT1-213ENST00000522414 CFAP99D6REC4 459 aa10.49□□□□□ -0.73
PVT1-213ENST00000522414 HOXA10P31260 410 aaPredicted RBP10.49□□□□□ -0.73
PVT1-213ENST00000522414 COPS6Q7L5N1 327 aa10.49□□□□□ -0.73
PVT1-213ENST00000522414 GPR161Q8N6U8 529 aaKnown RBP10.49□□□□□ -0.73
PVT1-213ENST00000522414 RPGRQ92834 1020 aaKnown RBP10.49□□□□□ -0.73
PVT1-213ENST00000522414 ZNF541Q9H0D2 1346 aa10.49□□□□□ -0.73
PVT1-213ENST00000522414 RIC1Q4ADV7 1423 aa10.49□□□□□ -0.73
PVT1-213ENST00000522414 CHL1O00533 1208 aa10.48□□□□□ -0.73
PVT1-213ENST00000522414 NTSR2O95665 410 aa10.48□□□□□ -0.73
PVT1-213ENST00000522414 F12P00748 615 aaPredicted RBP10.48□□□□□ -0.73
PVT1-213ENST00000522414 IARSP41252 1262 aaKnown RBP10.48□□□□□ -0.73
PVT1-213ENST00000522414 COL13A1Q5TAT6 717 aaPredicted RBP10.48□□□□□ -0.73
PVT1-213ENST00000522414 XAGE3Q8WTP9 111 aa10.48□□□□□ -0.73
PVT1-213ENST00000522414 TAF1DQ9H5J8 278 aaPredicted RBP10.48□□□□□ -0.73
PVT1-213ENST00000522414 DNMT3LQ9UJW3 386 aa10.48□□□□□ -0.73
PVT1-213ENST00000522414 CACNA1SQ13698 1873 aa10.48□□□□□ -0.73
PVT1-213ENST00000522414 NUP98P52948 1817 aa10.47□□□□□ -0.73
PVT1-213ENST00000522414 FZD9O00144 591 aa10.47□□□□□ -0.73
PVT1-213ENST00000522414 HCLS1P14317 486 aaPredicted RBP10.47□□□□□ -0.73
PVT1-213ENST00000522414 EAPPQ56P03 285 aaPredicted RBP10.47□□□□□ -0.73
PVT1-213ENST00000522414 SLC10A5Q5PT55 438 aa10.47□□□□□ -0.73
PVT1-213ENST00000522414 PPP1R42Q7Z4L9 355 aa10.47□□□□□ -0.73
PVT1-213ENST00000522414 MEIOBQ8N635 442 aa10.47□□□□□ -0.73
PVT1-213ENST00000522414 RUNDC1Q96C34 613 aa10.47□□□□□ -0.73
PVT1-213ENST00000522414 RBM17Q96I25 401 aaKnown RBP10.47□□□□□ -0.73
PVT1-213ENST00000522414 NLRP3Q96P20 1036 aa10.47□□□□□ -0.73
PVT1-213ENST00000522414 CRAMP1Q96RY5 1269 aa10.47□□□□□ -0.73
PVT1-213ENST00000522414 UTP14AQ9BVJ6 771 aaKnown RBP10.47□□□□□ -0.73
PVT1-213ENST00000522414 BABAM1Q9NWV8 329 aa10.47□□□□□ -0.73
PVT1-213ENST00000522414 PCDHB15Q9Y5E8 787 aa10.47□□□□□ -0.73
PVT1-213ENST00000522414 MYBBP1AQ9BQG0 1328 aaKnown RBP10.47□□□□□ -0.73
PVT1-213ENST00000522414 IBTKQ9P2D0 1353 aaPredicted RBP10.47□□□□□ -0.73
PVT1-213ENST00000522414 SNED1Q8TER0 1413 aa10.47□□□□□ -0.73
PVT1-213ENST00000522414 WDR90Q96KV7 1748 aa10.47□□□□□ -0.73
PVT1-213ENST00000522414 TULP1O00294 542 aaPredicted RBP10.46□□□□□ -0.73
PVT1-213ENST00000522414 BMP2P12643 396 aa10.46□□□□□ -0.73
PVT1-213ENST00000522414 LMOD3Q0VAK6 560 aa10.46□□□□□ -0.73
PVT1-213ENST00000522414 NR5A1Q13285 461 aa10.46□□□□□ -0.73
PVT1-213ENST00000522414 WDR43Q15061 677 aaKnown RBP eCLIP10.46□□□□□ -0.73
PVT1-213ENST00000522414 NLRP10Q86W26 655 aa10.46□□□□□ -0.73
PVT1-213ENST00000522414 LINC00528Q8N1L1 170 aa10.46□□□□□ -0.73
PVT1-213ENST00000522414 JDP2Q8WYK2 163 aa10.46□□□□□ -0.73
PVT1-213ENST00000522414 MKRN1Q9UHC7 482 aaKnown RBP10.46□□□□□ -0.73
PVT1-213ENST00000522414 HACL1Q9UJ83 578 aa10.46□□□□□ -0.73
PVT1-213ENST00000522414 GJA3Q9Y6H8 435 aa10.46□□□□□ -0.73
PVT1-213ENST00000522414 RNF123Q5XPI4 1314 aa10.45□□□□□ -0.74
PVT1-213ENST00000522414 IQCA1LA6NCM1 817 aa10.45□□□□□ -0.74
PVT1-213ENST00000522414 EPHX2P34913 555 aa10.45□□□□□ -0.74
PVT1-213ENST00000522414 TCIRG1Q13488 830 aa10.45□□□□□ -0.74
PVT1-213ENST00000522414 PARP10Q53GL7 1025 aa10.45□□□□□ -0.74
PVT1-213ENST00000522414 CC2D2BQ6DHV5 1058 aa10.45□□□□□ -0.74
PVT1-213ENST00000522414 LDHDQ86WU2 507 aa10.45□□□□□ -0.74
PVT1-213ENST00000522414 PSMD1Q99460 953 aa10.45□□□□□ -0.74
PVT1-213ENST00000522414 DDX21Q9NR30 783 aaKnown RBP eCLIP10.45□□□□□ -0.74
PVT1-213ENST00000522414 CHPF2Q9P2E5 772 aa10.45□□□□□ -0.74
PVT1-213ENST00000522414 MAP1SQ66K74 1059 aaPredicted RBP10.44□□□□□ -0.74
PVT1-213ENST00000522414 RSBN1LQ6PCB5 846 aaPredicted RBP10.44□□□□□ -0.74
PVT1-213ENST00000522414 LARGE2Q8N3Y3 721 aa10.44□□□□□ -0.74
PVT1-213ENST00000522414 PRKRIP1Q9H875 184 aaPredicted RBP10.44□□□□□ -0.74
PVT1-213ENST00000522414 TRMT112Q9UI30 125 aaKnown RBP10.44□□□□□ -0.74
PVT1-213ENST00000522414 ATP6V0A2Q9Y487 856 aa10.44□□□□□ -0.74
PVT1-213ENST00000522414 ANKRD36CQ5JPF3 1778 aa10.44□□□□□ -0.74
PVT1-213ENST00000522414 ATP5J2-PTCD1G3V325 749 aa10.43□□□□□ -0.74
PVT1-213ENST00000522414 ELL2O00472 640 aaPredicted RBP10.43□□□□□ -0.74
PVT1-213ENST00000522414 APAF1O14727 1248 aa10.43□□□□□ -0.74
PVT1-213ENST00000522414 EPS15P42566 896 aa10.43□□□□□ -0.74
PVT1-213ENST00000522414 EIF6P56537 245 aaKnown RBP10.43□□□□□ -0.74
PVT1-213ENST00000522414 TTLL12Q14166 644 aaPredicted RBP10.43□□□□□ -0.74
PVT1-213ENST00000522414 RTL5Q5HYW3 569 aaPredicted RBP10.43□□□□□ -0.74
PVT1-213ENST00000522414 DUSP27Q5VZP5 1158 aa10.43□□□□□ -0.74
PVT1-213ENST00000522414 CNTROBQ8N137 903 aa10.43□□□□□ -0.74
PVT1-213ENST00000522414 GPC2Q8N158 579 aa10.43□□□□□ -0.74
PVT1-213ENST00000522414 TMEM151AQ8N4L1 468 aa10.43□□□□□ -0.74
PVT1-213ENST00000522414 BEGAINQ9BUH8 593 aa10.43□□□□□ -0.74
PVT1-213ENST00000522414 ABCC4O15439 1325 aa10.42□□□□□ -0.74
PVT1-213ENST00000522414 PASKQ96RG2 1323 aa10.42□□□□□ -0.74
PVT1-213ENST00000522414 COL4A5P29400 1685 aa10.42□□□□□ -0.74
PVT1-213ENST00000522414 BBOX1O75936 387 aa10.42□□□□□ -0.74
PVT1-213ENST00000522414 HSPA1AP0DMV8 641 aaKnown RBP10.42□□□□□ -0.74
PVT1-213ENST00000522414 HSPA1BP0DMV9 641 aaKnown RBP10.42□□□□□ -0.74
PVT1-213ENST00000522414 FMR1Q06787 632 aaKnown RBP eCLIP10.42□□□□□ -0.74
PVT1-213ENST00000522414 AOC3Q16853 763 aa10.42□□□□□ -0.74
PVT1-213ENST00000522414 HSP90AB3PQ58FF7 597 aa10.42□□□□□ -0.74
PVT1-213ENST00000522414 HDGFL1Q5TGJ6 251 aa10.42□□□□□ -0.74
PVT1-213ENST00000522414 FAM89AQ96GI7 184 aa10.42□□□□□ -0.74
PVT1-213ENST00000522414 CNTNAP3BQ96NU0 1288 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms