RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 ARXQ96QS3 562 aa7.9□□□□□ -1.15
USP46-202ENST00000451218 ALX1Q15699 326 aa7.89□□□□□ -1.15
USP46-202ENST00000451218 CCDC152Q4G0S7 254 aa7.89□□□□□ -1.15
USP46-202ENST00000451218 LCORLQ8N3X6 602 aa7.89□□□□□ -1.15
USP46-202ENST00000451218 TRAK2O60296 914 aa7.89□□□□□ -1.15
USP46-202ENST00000451218 JAK2O60674 1132 aa7.89□□□□□ -1.15
USP46-202ENST00000451218 SLC27A3Q5K4L6 730 aa7.89□□□□□ -1.15
USP46-202ENST00000451218 FAM177BA6PVY3 158 aa7.89□□□□□ -1.15
USP46-202ENST00000451218 PLSCR1O15162 318 aa7.89□□□□□ -1.15
USP46-202ENST00000451218 PRKAB2O43741 272 aa7.89□□□□□ -1.15
USP46-202ENST00000451218 GADD45BO75293 160 aaPredicted RBP7.89□□□□□ -1.15
USP46-202ENST00000451218 GYG1P46976 350 aa7.89□□□□□ -1.15
USP46-202ENST00000451218 CDC37L1Q7L3B6 337 aa7.89□□□□□ -1.15
USP46-202ENST00000451218 NSUN7Q8NE18 718 aaKnown RBP7.89□□□□□ -1.15
USP46-202ENST00000451218 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.88□□□□□ -1.15
USP46-202ENST00000451218 KRT27Q7Z3Y8 459 aa7.88□□□□□ -1.15
USP46-202ENST00000451218 TMEM63CQ9P1W3 806 aa7.88□□□□□ -1.15
USP46-202ENST00000451218 WDR19Q8NEZ3 1342 aa7.88□□□□□ -1.15
USP46-202ENST00000451218 RBBP6Q7Z6E9 1792 aaKnown RBP7.88□□□□□ -1.15
USP46-202ENST00000451218 PFKFB2O60825 505 aa7.88□□□□□ -1.15
USP46-202ENST00000451218 TRIM37O94972 964 aa7.88□□□□□ -1.15
USP46-202ENST00000451218 IGDCC4Q8TDY8 1250 aa7.88□□□□□ -1.15
USP46-202ENST00000451218 HOXA10P31260 410 aaPredicted RBP7.88□□□□□ -1.15
USP46-202ENST00000451218 FKBP4Q02790 459 aaKnown RBP eCLIP7.88□□□□□ -1.15
USP46-202ENST00000451218 NTRK3Q16288 839 aa7.88□□□□□ -1.15
USP46-202ENST00000451218 TTC39AQ5SRH9 613 aa7.88□□□□□ -1.15
USP46-202ENST00000451218 POTEAQ6S8J7 498 aa7.88□□□□□ -1.15
USP46-202ENST00000451218 Q6ZUG5 572 aa7.88□□□□□ -1.15
USP46-202ENST00000451218 CCDC83Q8IWF9 413 aa7.88□□□□□ -1.15
USP46-202ENST00000451218 LRRC2Q9BYS8 371 aa7.88□□□□□ -1.15
USP46-202ENST00000451218 ANO8Q9HCE9 1232 aaPredicted RBP7.88□□□□□ -1.15
USP46-202ENST00000451218 NOL8Q76FK4 1167 aaKnown RBP7.88□□□□□ -1.15
USP46-202ENST00000451218 NEK1Q96PY6 1258 aa7.88□□□□□ -1.15
USP46-202ENST00000451218 FUCA2Q9BTY2 467 aa7.88□□□□□ -1.15
USP46-202ENST00000451218 PARP14Q460N5 1801 aa7.88□□□□□ -1.15
USP46-202ENST00000451218 UBE2Q2LH0YL09 131 aa7.87□□□□□ -1.15
USP46-202ENST00000451218 PDIA3P30101 505 aaKnown RBP7.87□□□□□ -1.15
USP46-202ENST00000451218 COL23A1Q86Y22 540 aaPredicted RBP7.87□□□□□ -1.15
USP46-202ENST00000451218 ROBO3Q96MS0 1386 aa7.87□□□□□ -1.15
USP46-202ENST00000451218 GJB2P29033 226 aa7.87□□□□□ -1.15
USP46-202ENST00000451218 UBE4AQ14139 1066 aa7.87□□□□□ -1.15
USP46-202ENST00000451218 TXNRD1Q16881 649 aa7.87□□□□□ -1.15
USP46-202ENST00000451218 KLHL40Q2TBA0 621 aa7.87□□□□□ -1.15
USP46-202ENST00000451218 NSUN4Q96CB9 384 aaKnown RBP7.87□□□□□ -1.15
USP46-202ENST00000451218 CNNM1Q9NRU3 951 aa7.87□□□□□ -1.15
USP46-202ENST00000451218 CYP46A1Q9Y6A2 500 aa7.87□□□□□ -1.15
USP46-202ENST00000451218 PCNTO95613 3336 aa7.87□□□□□ -1.15
USP46-202ENST00000451218 ZFYP08048 801 aaPredicted RBP7.87□□□□□ -1.15
USP46-202ENST00000451218 RESTQ13127 1097 aa7.87□□□□□ -1.15
USP46-202ENST00000451218 ANAPC4Q9UJX5 808 aa7.87□□□□□ -1.15
USP46-202ENST00000451218 RTCBQ9Y3I0 505 aaKnown RBP7.87□□□□□ -1.15
USP46-202ENST00000451218 MYH4Q9Y623 1939 aa7.87□□□□□ -1.15
USP46-202ENST00000451218 CHST3Q7LGC8 479 aa7.87□□□□□ -1.15
USP46-202ENST00000451218 ZSCAN22P10073 491 aaPredicted RBP7.86□□□□□ -1.15
USP46-202ENST00000451218 MCCP23508 829 aa7.86□□□□□ -1.15
USP46-202ENST00000451218 CCDC158Q5M9N0 1113 aa7.86□□□□□ -1.15
USP46-202ENST00000451218 SLC9C2Q5TAH2 1124 aa7.86□□□□□ -1.15
USP46-202ENST00000451218 DHX32Q7L7V1 743 aaKnown RBP7.86□□□□□ -1.15
USP46-202ENST00000451218 LY9Q9HBG7 655 aa7.86□□□□□ -1.15
USP46-202ENST00000451218 ZNF652Q9Y2D9 606 aa7.86□□□□□ -1.15
USP46-202ENST00000451218 NBPF11Q86T75 865 aa7.86□□□□□ -1.15
USP46-202ENST00000451218 RANBP6O60518 1105 aaKnown RBP7.86□□□□□ -1.15
USP46-202ENST00000451218 F13A1P00488 732 aa7.86□□□□□ -1.15
USP46-202ENST00000451218 XRCC6P12956 609 aaKnown RBP eCLIP7.86□□□□□ -1.15
USP46-202ENST00000451218 NUCB2P80303 420 aa7.86□□□□□ -1.15
USP46-202ENST00000451218 SH2B1Q9NRF2 756 aaPredicted RBP7.86□□□□□ -1.15
USP46-202ENST00000451218 GPSM2P81274 684 aa7.85□□□□□ -1.15
USP46-202ENST00000451218 APOBRQ0VD83 1088 aa7.85□□□□□ -1.15
USP46-202ENST00000451218 SEC23AQ15436 765 aa7.85□□□□□ -1.15
USP46-202ENST00000451218 CAMKK2Q96RR4 588 aa7.85□□□□□ -1.15
USP46-202ENST00000451218 POLLQ9UGP5 575 aa7.85□□□□□ -1.15
USP46-202ENST00000451218 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.85□□□□□ -1.15
USP46-202ENST00000451218 SH2B2O14492 632 aaPredicted RBP7.85□□□□□ -1.15
USP46-202ENST00000451218 STX6O43752 255 aa7.85□□□□□ -1.15
USP46-202ENST00000451218 PHF14O94880 888 aa7.85□□□□□ -1.15
USP46-202ENST00000451218 SLC5A1P13866 664 aa7.85□□□□□ -1.15
USP46-202ENST00000451218 CDC27P30260 824 aa7.85□□□□□ -1.15
USP46-202ENST00000451218 ZNF445P59923 1031 aa7.85□□□□□ -1.15
USP46-202ENST00000451218 FUT2Q10981 343 aa7.85□□□□□ -1.15
USP46-202ENST00000451218 GRAPQ13588 217 aa7.85□□□□□ -1.15
USP46-202ENST00000451218 TDRD7Q8NHU6 1098 aaKnown RBP7.85□□□□□ -1.15
USP46-202ENST00000451218 GRAPLQ8TC17 118 aaPredicted RBP7.85□□□□□ -1.15
USP46-202ENST00000451218 GPR101Q96P66 508 aaPredicted RBP7.85□□□□□ -1.15
USP46-202ENST00000451218 PANK2Q9BZ23 570 aa7.85□□□□□ -1.15
USP46-202ENST00000451218 PDGFDQ9GZP0 370 aaPredicted RBP7.85□□□□□ -1.15
USP46-202ENST00000451218 C10orf71Q711Q0 1435 aa7.85□□□□□ -1.15
USP46-202ENST00000451218 UQCRFS1P1P0C7P4 283 aa7.85□□□□□ -1.15
USP46-202ENST00000451218 MKRN4PQ13434 485 aaPredicted RBP7.85□□□□□ -1.15
USP46-202ENST00000451218 OLFM4Q6UX06 510 aa7.85□□□□□ -1.15
USP46-202ENST00000451218 BICDL1Q6ZP65 573 aa7.85□□□□□ -1.15
USP46-202ENST00000451218 MAGEB6Q8N7X4 407 aa7.85□□□□□ -1.15
USP46-202ENST00000451218 RBM27Q9P2N5 1060 aaKnown RBP7.85□□□□□ -1.15
USP46-202ENST00000451218 IL1R1P14778 569 aa7.85□□□□□ -1.15
USP46-202ENST00000451218 RPS8P62241 208 aaKnown RBP7.85□□□□□ -1.15
USP46-202ENST00000451218 BLOC1S2Q6QNY1 142 aa7.85□□□□□ -1.15
USP46-202ENST00000451218 IFNL3Q8IZI9 196 aa7.85□□□□□ -1.15
USP46-202ENST00000451218 STAG1Q8WVM7 1258 aa7.85□□□□□ -1.15
USP46-202ENST00000451218 ARMT1Q9H993 441 aa7.85□□□□□ -1.15
USP46-202ENST00000451218 NCOA5Q9HCD5 579 aaKnown RBP7.85□□□□□ -1.15
USP46-202ENST00000451218 ATAD5Q96QE3 1844 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms