RNA–Protein interactions for RNA: ENST00000439649.7

GFRA1-204, Transcript of GDNF family receptor alpha 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene GFRA1, Length 9,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1-204ENST00000439649 GEN1Q17RS7 908 aa13.75□□□□□ -0.21
GFRA1-204ENST00000439649 C8orf74Q6P047 294 aa13.75□□□□□ -0.21
GFRA1-204ENST00000439649 TRERF1Q96PN7 1200 aa13.75□□□□□ -0.21
GFRA1-204ENST00000439649 URB1O60287 2271 aaKnown RBP13.75□□□□□ -0.21
GFRA1-204ENST00000439649 CNNM4Q6P4Q7 775 aa13.75□□□□□ -0.21
GFRA1-204ENST00000439649 PPP2R3AQ06190 1150 aa13.74□□□□□ -0.21
GFRA1-204ENST00000439649 CCDC152Q4G0S7 254 aa13.74□□□□□ -0.21
GFRA1-204ENST00000439649 UBLCP1Q8WVY7 318 aaPredicted RBP13.74□□□□□ -0.21
GFRA1-204ENST00000439649 GUCA1BQ9UMX6 200 aa13.74□□□□□ -0.21
GFRA1-204ENST00000439649 NOX5Q96PH1 765 aa13.74□□□□□ -0.21
GFRA1-204ENST00000439649 PFDN4Q9NQP4 134 aa13.74□□□□□ -0.21
GFRA1-204ENST00000439649 TRMT112Q9UI30 125 aaKnown RBP13.74□□□□□ -0.21
GFRA1-204ENST00000439649 FAN1Q9Y2M0 1017 aa13.74□□□□□ -0.21
GFRA1-204ENST00000439649 NAIPQ13075 1403 aa13.74□□□□□ -0.21
GFRA1-204ENST00000439649 CYP26C1Q6V0L0 522 aa13.74□□□□□ -0.21
GFRA1-204ENST00000439649 PARP2Q9UGN5 583 aa13.74□□□□□ -0.21
GFRA1-204ENST00000439649 STX10O60499 249 aa13.74□□□□□ -0.21
GFRA1-204ENST00000439649 AKR1B15C9JRZ8 316 aaPredicted RBP13.74□□□□□ -0.21
GFRA1-204ENST00000439649 CCDC122Q5T0U0 273 aa13.74□□□□□ -0.21
GFRA1-204ENST00000439649 ARHGEF12Q9NZN5 1544 aa13.74□□□□□ -0.21
GFRA1-204ENST00000439649 GOLGA8QA0A0J9YX86 632 aa13.74□□□□□ -0.21
GFRA1-204ENST00000439649 GOLGA8OA6NCC3 632 aa13.74□□□□□ -0.21
GFRA1-204ENST00000439649 GOLGA8NF8WBI6 632 aa13.74□□□□□ -0.21
GFRA1-204ENST00000439649 FAM13AO94988 1023 aa13.74□□□□□ -0.21
GFRA1-204ENST00000439649 F13A1P00488 732 aa13.74□□□□□ -0.21
GFRA1-204ENST00000439649 GKAP1Q5VSY0 366 aaPredicted RBP13.74□□□□□ -0.21
GFRA1-204ENST00000439649 RNF10Q8N5U6 811 aaKnown RBP13.74□□□□□ -0.21
GFRA1-204ENST00000439649 BAG1Q99933 345 aaPredicted RBP13.74□□□□□ -0.21
GFRA1-204ENST00000439649 GOLGA6BA6NDN3 693 aa13.73□□□□□ -0.21
GFRA1-204ENST00000439649 LIN9Q5TKA1 542 aa13.73□□□□□ -0.21
GFRA1-204ENST00000439649 NUP160Q12769 1436 aa13.73□□□□□ -0.21
GFRA1-204ENST00000439649 E7EVH7 732 aa13.73□□□□□ -0.21
GFRA1-204ENST00000439649 KRT2P35908 639 aa13.73□□□□□ -0.21
GFRA1-204ENST00000439649 ITIH3Q06033 890 aa13.73□□□□□ -0.21
GFRA1-204ENST00000439649 ALG1Q9BT22 464 aa13.73□□□□□ -0.21
GFRA1-204ENST00000439649 CACNA1FO60840 1977 aa13.73□□□□□ -0.21
GFRA1-204ENST00000439649 ZFYVE9O95405 1425 aa13.73□□□□□ -0.21
GFRA1-204ENST00000439649 NUP58Q9BVL2 599 aa13.73□□□□□ -0.21
GFRA1-204ENST00000439649 ZNF830Q96NB3 372 aaPredicted RBP13.73□□□□□ -0.21
GFRA1-204ENST00000439649 FLOT1O75955 427 aa13.73□□□□□ -0.21
GFRA1-204ENST00000439649 EPB41P11171 864 aaKnown RBP13.73□□□□□ -0.21
GFRA1-204ENST00000439649 RRS1Q15050 365 aaKnown RBP13.73□□□□□ -0.21
GFRA1-204ENST00000439649 AOPEPQ8N6M6 819 aa13.73□□□□□ -0.21
GFRA1-204ENST00000439649 BIVM-ERCC5R4GMW8 1640 aa13.73□□□□□ -0.21
GFRA1-204ENST00000439649 SLC8A1P32418 973 aa13.73□□□□□ -0.21
GFRA1-204ENST00000439649 NAPGQ99747 312 aaPredicted RBP13.73□□□□□ -0.21
GFRA1-204ENST00000439649 GCC2Q8IWJ2 1684 aa13.73□□□□□ -0.21
GFRA1-204ENST00000439649 PLXNC1O60486 1568 aa13.73□□□□□ -0.21
GFRA1-204ENST00000439649 PLCD1P51178 756 aa13.73□□□□□ -0.21
GFRA1-204ENST00000439649 CLNS1AP54105 237 aaKnown RBP13.73□□□□□ -0.21
GFRA1-204ENST00000439649 PHLDB3Q6NSJ2 640 aa13.73□□□□□ -0.21
GFRA1-204ENST00000439649 P3H4Q92791 437 aa13.73□□□□□ -0.21
GFRA1-204ENST00000439649 SATB1Q01826 763 aa13.72□□□□□ -0.21
GFRA1-204ENST00000439649 EVI5O60447 810 aa13.72□□□□□ -0.21
GFRA1-204ENST00000439649 KRT79Q5XKE5 535 aa13.72□□□□□ -0.21
GFRA1-204ENST00000439649 LAMC3Q9Y6N6 1575 aa13.72□□□□□ -0.21
GFRA1-204ENST00000439649 HMGB3O15347 200 aaKnown RBP13.72□□□□□ -0.21
GFRA1-204ENST00000439649 ZNF354CQ86Y25 554 aa13.72□□□□□ -0.21
GFRA1-204ENST00000439649 RRP36Q96EU6 259 aaKnown RBP13.72□□□□□ -0.21
GFRA1-204ENST00000439649 MCMDC2Q4G0Z9 681 aa13.72□□□□□ -0.21
GFRA1-204ENST00000439649 DENND2CQ68D51 928 aa13.72□□□□□ -0.21
GFRA1-204ENST00000439649 IFT81Q8WYA0 676 aa13.72□□□□□ -0.21
GFRA1-204ENST00000439649 ZFP91Q96JP5 570 aaPredicted RBP13.72□□□□□ -0.21
GFRA1-204ENST00000439649 KCNK9Q9NPC2 374 aa13.72□□□□□ -0.21
GFRA1-204ENST00000439649 UBE3BQ7Z3V4 1068 aa13.72□□□□□ -0.21
GFRA1-204ENST00000439649 CCDC84Q86UT8 332 aaPredicted RBP13.72□□□□□ -0.21
GFRA1-204ENST00000439649 RFC1P35251 1148 aaPredicted RBP13.72□□□□□ -0.21
GFRA1-204ENST00000439649 FAM160A1Q05DH4 1040 aa13.72□□□□□ -0.21
GFRA1-204ENST00000439649 TMX3Q96JJ7 454 aa13.72□□□□□ -0.21
GFRA1-204ENST00000439649 WDR44Q5JSH3 913 aa13.72□□□□□ -0.21
GFRA1-204ENST00000439649 GIMAP6Q6P9H5 292 aa13.71□□□□□ -0.21
GFRA1-204ENST00000439649 FCHSD1Q86WN1 690 aa13.71□□□□□ -0.21
GFRA1-204ENST00000439649 RAPGEF6Q8TEU7 1601 aa13.71□□□□□ -0.21
GFRA1-204ENST00000439649 PAK2Q13177 524 aa13.71□□□□□ -0.21
GFRA1-204ENST00000439649 CCDC170Q8IYT3 715 aa13.71□□□□□ -0.21
GFRA1-204ENST00000439649 KIFC2Q96AC6 838 aa13.71□□□□□ -0.21
GFRA1-204ENST00000439649 RAB17Q9H0T7 212 aa13.71□□□□□ -0.21
GFRA1-204ENST00000439649 NAPAP54920 295 aa13.71□□□□□ -0.21
GFRA1-204ENST00000439649 HAUS3Q68CZ6 603 aa13.71□□□□□ -0.21
GFRA1-204ENST00000439649 KCNG1Q9UIX4 513 aa13.71□□□□□ -0.21
GFRA1-204ENST00000439649 PPFIA4O75335 1185 aa13.71□□□□□ -0.21
GFRA1-204ENST00000439649 ST5P78524 1137 aa13.71□□□□□ -0.21
GFRA1-204ENST00000439649 CCDC25Q86WR0 208 aa13.71□□□□□ -0.21
GFRA1-204ENST00000439649 CCDC125Q86Z20 511 aa13.71□□□□□ -0.22
GFRA1-204ENST00000439649 LARSQ9P2J5 1176 aaKnown RBP13.71□□□□□ -0.22
GFRA1-204ENST00000439649 MYH6P13533 1939 aa13.71□□□□□ -0.22
GFRA1-204ENST00000439649 TTLL12Q14166 644 aaPredicted RBP13.71□□□□□ -0.22
GFRA1-204ENST00000439649 HSP90AA5PQ58FG0 334 aa13.71□□□□□ -0.22
GFRA1-204ENST00000439649 PTGS1P23219 599 aa13.71□□□□□ -0.22
GFRA1-204ENST00000439649 MYL5Q02045 173 aa13.71□□□□□ -0.22
GFRA1-204ENST00000439649 USP48Q86UV5 1035 aa13.7□□□□□ -0.22
GFRA1-204ENST00000439649 ZNF804AQ7Z570 1209 aa13.7□□□□□ -0.22
GFRA1-204ENST00000439649 RNF216Q9NWF9 866 aaPredicted RBP13.7□□□□□ -0.22
GFRA1-204ENST00000439649 TOPBP1Q92547 1522 aa13.7□□□□□ -0.22
GFRA1-204ENST00000439649 MUM1L1Q5H9M0 696 aa13.7□□□□□ -0.22
GFRA1-204ENST00000439649 LLPHQ9BRT6 129 aaKnown RBP13.7□□□□□ -0.22
GFRA1-204ENST00000439649 MED4Q9NPJ6 270 aa13.7□□□□□ -0.22
GFRA1-204ENST00000439649 UNC13AQ9UPW8 1703 aa13.7□□□□□ -0.22
GFRA1-204ENST00000439649 GUCY1B3Q02153 619 aa13.7□□□□□ -0.22
GFRA1-204ENST00000439649 CFAP221Q4G0U5 840 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms