RNA–Protein interactions for RNA: ENSMUST00000071057.13

Ddx55-201, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx55, Length 2,799 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-201ENSMUST00000071057 Ufl1Q8CCJ3 793 aaKnown RBP13.19□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Tmem143Q8VD26 458 aa13.19□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Igbp1bQ9QZ29 343 aa13.19□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Gm17615E9Q9P2 165 aa13.18□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Lnx1O70263 728 aa13.18□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Vps33bP59016 617 aa13.18□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Limch1Q3UH68 1057 aa13.18□□□□□ -0.3
Ddx55-201ENSMUST00000071057 E4f1Q8CCE9 783 aa13.18□□□□□ -0.3
Ddx55-201ENSMUST00000071057 BrapQ99MP8 591 aa13.18□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Rbm33Q9CXK9 1231 aaKnown RBP13.18□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Ndufa8Q9DCJ5 172 aa13.18□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Sik3Q6P4S6 1311 aa13.18□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Pcdhb9E9Q5G2 828 aa13.18□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Speer4dL7N216 212 aa13.18□□□□□ -0.3
Ddx55-201ENSMUST00000071057 CltaO08585 235 aa13.18□□□□□ -0.3
Ddx55-201ENSMUST00000071057 TrhQ62361 256 aa13.18□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Acap3Q6NXL5 833 aa13.18□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Tspan18Q80WR1 248 aa13.18□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Med4Q9CQA5 270 aa13.18□□□□□ -0.3
Ddx55-201ENSMUST00000071057 CpvlQ9D3S9 478 aa13.18□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Myh7Q91Z83 1935 aa13.18□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Setdb1O88974 1307 aa13.18□□□□□ -0.3
Ddx55-201ENSMUST00000071057 GakQ99KY4 1305 aa13.18□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Stox1B2RQL2 990 aa13.17□□□□□ -0.3
Ddx55-201ENSMUST00000071057 MsnP26041 577 aaKnown RBP13.17□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Snai1Q02085 264 aa13.17□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Fam170aQ66LM6 333 aa13.17□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Ppp1r12aQ9DBR7 1029 aaKnown RBP13.17□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Letm1Q9Z2I0 738 aa13.17□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Gm13023A2A8N2 498 aa13.17□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Ubap1lG3UW59 384 aa13.17□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Znf496Q5SXI5 585 aa13.17□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Ncaph2Q8BSP2 607 aa13.17□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Slc39a11Q8BWY7 342 aa13.17□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Rufy2Q8R4C2 606 aa13.17□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Adam1bQ8R534 806 aa13.17□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Cnot6lQ8VEG6 555 aa13.17□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Chd1lQ9CXF7 900 aa13.17□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Gm4340L7N2C4 268 aa13.16□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Rnf216P58283 853 aa13.16□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Washc4Q3UMB9 1173 aa13.16□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Sil1Q9EPK6 465 aa13.16□□□□□ -0.3
Ddx55-201ENSMUST00000071057 MycbpQ9EQS3 103 aa13.16□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Rps6ka4Q9Z2B9 773 aa13.16□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Mroh6V9GX81 722 aa13.16□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Carmil3Q3UFQ8 1375 aa13.16□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Vmn2r23E9PXI5 849 aa13.16□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Prdm1Q60636 856 aa13.16□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Smarcc2Q6PDG5 1213 aa13.16□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Cep55Q8BT07 462 aa13.16□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Tmx4Q8C0L0 335 aa13.16□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Zfp317Q8C0Q5 607 aa13.16□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Plcd1Q8R3B1 756 aa13.16□□□□□ -0.3
Ddx55-201ENSMUST00000071057 IcoslgQ9JHJ8 322 aa13.16□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Rcan3Q9JKK0 239 aa13.16□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Pde4bB1AWC9 736 aa13.15□□□□□ -0.3
Ddx55-201ENSMUST00000071057 NcapgE9PWG6 1004 aa13.15□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Casp1P29452 402 aa13.15□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Pald1P70261 859 aa13.15□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Atp1b3P97370 278 aa13.15□□□□□ -0.3
Ddx55-201ENSMUST00000071057 ImmtQ8CAQ8 757 aaKnown RBP13.15□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Alg3Q8K2A8 438 aa13.15□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Ush1cQ9ES64 910 aa13.15□□□□□ -0.3
Ddx55-201ENSMUST00000071057 1700029H14RikE9PY36 240 aa13.15□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Bach1P97302 739 aa13.15□□□□□ -0.3
Ddx55-201ENSMUST00000071057 SowahdQ8BY98 327 aa13.15□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Mrpl44Q9CY73 333 aaKnown RBP13.15□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Krt85Q9Z2T6 507 aa13.15□□□□□ -0.3
Ddx55-201ENSMUST00000071057 Ccdc69Q3TCJ8 202 aa13.15□□□□□ -0.31
Ddx55-201ENSMUST00000071057 GapdhsQ64467 440 aa13.15□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Pdcl2Q78Y63 240 aa13.15□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Olfml1Q8BSH2 233 aa13.15□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Fsd2Q8BZ52 692 aa13.15□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Srgap1Q91Z69 1062 aa13.15□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Tktl2Q9D4D4 627 aa13.15□□□□□ -0.31
Ddx55-201ENSMUST00000071057 SufuQ9Z0P7 484 aa13.15□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Lrp5Q91VN0 1614 aa13.14□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Zscan25B2RX31 543 aa13.14□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Rgs9O54828 675 aa13.14□□□□□ -0.31
Ddx55-201ENSMUST00000071057 GscQ02591 256 aa13.14□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Tmem59lQ7TNI2 337 aa13.14□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Srp68Q8BMA6 625 aaKnown RBP13.14□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Znfx1Q8R151 1909 aaKnown RBP13.14□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Atp8b3Q6UQ17 1335 aa13.14□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Spata31d1bE9QA57 1361 aa13.14□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Zbtb7aO88939 569 aaKnown RBP13.14□□□□□ -0.31
Ddx55-201ENSMUST00000071057 IntuQ059U7 942 aa13.14□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Cep131Q62036 1060 aa13.14□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Ube3cQ80U95 1083 aa13.14□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Armcx6Q8K3A6 301 aa13.14□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Dbndd1Q9CZ00 160 aa13.14□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Lama4P97927 1816 aa13.14□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Col3a1P08121 1464 aa13.13□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Krt24A1L317 512 aa13.13□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Lipo1J3QME6 396 aa13.13□□□□□ -0.31
Ddx55-201ENSMUST00000071057 GabrdP22933 449 aa13.13□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Zfp51Q3U4L8 781 aa13.13□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Znf513Q6PD29 541 aa13.13□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Rps6ka5Q8C050 863 aa13.13□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Ces1dQ8VCT4 565 aa13.13□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 14.2 ms