RNA–Protein interactions for RNA: ENST00000519895.5

MCF2-208, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,346 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-208ENST00000519895 A0A1W2PRF3 423 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 A0A1W2PRM7 423 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 HMGB3O15347 200 aaKnown RBP2.27□□□□□ -2.05
MCF2-208ENST00000519895 IGHG2P01859 326 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 RAG2P55895 527 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 AP3S2P59780 193 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 ZNF45Q02386 682 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 CFHR3Q02985 330 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 IKZF1Q13422 519 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 ARFRP1Q13795 201 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 SLC9A3R2Q15599 337 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 AVPI1Q5T686 147 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 ZNF782Q6ZMW2 699 aaPredicted RBP2.27□□□□□ -2.05
MCF2-208ENST00000519895 SLC25A42Q86VD7 318 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 NDUFA11Q86Y39 141 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 FOXRED2Q8IWF2 684 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 ABHD12Q8N2K0 398 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 ZNF645Q8N7E2 425 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 GDPD1Q8N9F7 314 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 TMEM185AQ8NFB2 350 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 VSTM2AQ8TAG5 236 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 PIFOQ8TCI5 191 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 ABHD5Q8WTS1 349 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 SGCDQ92629 289 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 SLC25A38Q96DW6 304 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 ZNF48Q96MX3 618 aaPredicted RBP2.27□□□□□ -2.05
MCF2-208ENST00000519895 S1PR3Q99500 378 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 AGMATQ9BSE5 352 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 FUNDC2Q9BWH2 189 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 PRSS22Q9GZN4 317 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 ALX4Q9H161 411 aaPredicted RBP2.27□□□□□ -2.05
MCF2-208ENST00000519895 CEPT1Q9Y6K0 416 aa2.27□□□□□ -2.05
MCF2-208ENST00000519895 L7N2F9 121 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 TOR1AO14656 332 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 CRTAPO75718 401 aaPredicted RBP2.26□□□□□ -2.05
MCF2-208ENST00000519895 HOXB5P09067 269 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 HSMCR30P0CW71 290 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 HIST1H1BP16401 226 aaKnown RBP2.26□□□□□ -2.05
MCF2-208ENST00000519895 EDN2P20800 178 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 AADACP22760 399 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 PSMB9P28065 219 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 GPR12P47775 334 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 ZNF134P52741 427 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 EFNB2P52799 333 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 SRPXP78539 464 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 DHODHQ02127 395 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 FOXE3Q13461 319 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 LHFPL1Q86WI0 220 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 ODF3L1Q8IXM7 274 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 RDH10Q8IZV5 341 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 JAGN1Q8N5M9 183 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 NHLRC2Q8NBF2 726 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 ZNF114Q8NC26 417 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 TMEM104Q8NE00 496 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 OR5M8Q8NGP6 311 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 OR52E5Q8NH55 327 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 RNASE8Q8TDE3 154 aaKnown RBP2.26□□□□□ -2.05
MCF2-208ENST00000519895 S100ZQ8WXG8 99 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 C18orf15Q96N68 181 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 CITED1Q99966 193 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 CMSS1Q9BQ75 279 aaKnown RBP2.26□□□□□ -2.05
MCF2-208ENST00000519895 ZNF251Q9BRH9 671 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 CCDC32Q9BV29 185 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 TMED9Q9BVK6 235 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 SELENOIQ9C0D9 397 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 AMBNQ9NP70 447 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 PALMDQ9NP74 551 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 PLEKHJ1Q9NW61 149 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 COA4Q9NYJ1 87 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 BET1LQ9NYM9 111 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 MTFP1Q9UDX5 166 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 PLA2G2DQ9UNK4 145 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 DNAH9Q9NYC9 4486 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 PLCE1Q9P212 2302 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 DYNC1H1Q14204 4646 aaKnown RBP2.26□□□□□ -2.05
MCF2-208ENST00000519895 C12orf77C9JDV5 145 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 GEMIN2O14893 280 aaKnown RBP2.26□□□□□ -2.05
MCF2-208ENST00000519895 FABP7O15540 132 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 CDRT1O95170 752 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 PAHP00439 452 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 MOSP00540 346 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 HBZP02008 142 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 ZNF44P15621 663 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 NDUFB7P17568 137 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 S100GP29377 79 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 CD40LGP29965 261 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 BLVRBP30043 206 aaPredicted RBP2.26□□□□□ -2.05
MCF2-208ENST00000519895 GABRA2P47869 451 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 SNU13P55769 128 aaKnown RBP2.26□□□□□ -2.05
MCF2-208ENST00000519895 TAS2R31P59538 309 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 UBE2KP61086 200 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 BAMBIQ13145 260 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 TEPPQ6URK8 271 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 CCDC190Q86UF4 302 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 TMEM17Q86X19 198 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 SLC38A6Q8IZM9 456 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 LRTM2Q8N967 370 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 BHLHE23Q8NDY6 225 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 OR5AP2Q8NGF4 316 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 OR4C13Q8NGP0 309 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms