RNA–Protein interactions for RNA: snR62

snR62, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR62, Length 100 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR62	snR62	ROK1	P45818	564 aa	Predicted RBP	0.61	□□□□□ -2.31
snR62	snR62	MPS3	P47069	682 aa		0.61	□□□□□ -2.31
snR62	snR62	CHS5	Q12114	671 aa	Known RBP	0.61	□□□□□ -2.31
snR62	snR62	RPL7B	Q12213	244 aa	Known RBP	0.61	□□□□□ -2.31
snR62	snR62	UBX3	Q12229	455 aa		0.61	□□□□□ -2.31
snR62	snR62	RNR1	P21524	888 aa	Known RBP	0.6	□□□□□ -2.31
snR62	snR62	VBA5	P36172	582 aa		0.6	□□□□□ -2.31
snR62	snR62	HSL7	P38274	827 aa		0.6	□□□□□ -2.31
snR62	snR62	PIG2	P40187	538 aa		0.6	□□□□□ -2.31
snR62	snR62	GID8	P40208	455 aa		0.6	□□□□□ -2.31
snR62	snR62	KHA1	P40309	873 aa		0.6	□□□□□ -2.31
snR62	snR62	SAD1	P43589	448 aa		0.6	□□□□□ -2.31
snR62	snR62	TAD1	P53065	400 aa		0.6	□□□□□ -2.31
snR62	snR62	SNF12	P53628	566 aa		0.6	□□□□□ -2.31
snR62	snR62	UFO1	Q04511	668 aa		0.6	□□□□□ -2.31
snR62	snR62	YMR034C	Q05131	434 aa	Predicted RBP	0.6	□□□□□ -2.31
snR62	snR62	SRD1	P09007	221 aa		0.59	□□□□□ -2.31
snR62	snR62	AGP1	P25376	633 aa		0.59	□□□□□ -2.31
snR62	snR62	BIT2	P38346	545 aa		0.59	□□□□□ -2.31
snR62	snR62	SET5	P38890	526 aa	Known RBP	0.59	□□□□□ -2.31
snR62	snR62	EXO1	P39875	702 aa		0.59	□□□□□ -2.31
snR62	snR62	MCM21	Q06675	368 aa		0.59	□□□□□ -2.31
snR62	snR62	TIP41	Q12199	356 aa		0.59	□□□□□ -2.31
snR62	snR62	SEC3	P33332	1336 aa	Known RBP	0.59	□□□□□ -2.32
snR62	snR62	ERG20	P08524	352 aa	Known RBP	0.58	□□□□□ -2.32
snR62	snR62	SSA1	P10591	642 aa	Known RBP	0.58	□□□□□ -2.32
snR62	snR62	VBA3	P25594	458 aa		0.58	□□□□□ -2.32
snR62	snR62	MRPL7	P36519	292 aa		0.58	□□□□□ -2.32
snR62	snR62	MKT1	P40850	830 aa	Known RBP	0.58	□□□□□ -2.32
snR62	snR62	ZIP2	P53061	704 aa		0.58	□□□□□ -2.32
snR62	snR62	TPO2	P53283	614 aa		0.58	□□□□□ -2.32
snR62	snR62	TRS23	Q03784	219 aa		0.58	□□□□□ -2.32
snR62	snR62	TPO3	Q06451	622 aa		0.58	□□□□□ -2.32
snR62	snR62	RDL1	Q12305	139 aa	Known RBP	0.58	□□□□□ -2.32
snR62	snR62	YPR071W	Q12346	211 aa		0.58	□□□□□ -2.32
snR62	snR62	ZPS1	Q12512	249 aa		0.58	□□□□□ -2.32
snR62	snR62	GSY2	P27472	705 aa		0.57	□□□□□ -2.32
snR62	snR62	LOT5	P34234	306 aa		0.57	□□□□□ -2.32
snR62	snR62	MGE1	P38523	228 aa		0.57	□□□□□ -2.32
snR62	snR62	KRI1	P42846	591 aa	Known RBP	0.57	□□□□□ -2.32
snR62	snR62	NOP9	P47077	666 aa	Known RBP	0.57	□□□□□ -2.32
snR62	snR62	RFX1	P48743	811 aa		0.57	□□□□□ -2.32
snR62	snR62	NIT3	P49954	291 aa		0.57	□□□□□ -2.32
snR62	snR62	THI22	Q06490	572 aa		0.57	□□□□□ -2.32
snR62	snR62	STP4	Q07351	490 aa		0.57	□□□□□ -2.32
snR62	snR62	LDB16	P25587	256 aa		0.56	□□□□□ -2.32
snR62	snR62	ELF1	P36053	145 aa		0.56	□□□□□ -2.32
snR62	snR62	IPL1	P38991	367 aa		0.56	□□□□□ -2.32
snR62	snR62	SHR5	P41912	237 aa		0.56	□□□□□ -2.32
snR62	snR62	HMO1	Q03973	246 aa	Known RBP	0.56	□□□□□ -2.32
snR62	snR62	MLH2	Q07980	695 aa		0.56	□□□□□ -2.32
snR62	snR62	DIA2	Q08496	732 aa	Predicted RBP	0.56	□□□□□ -2.32
snR62	snR62	ECM3	Q99252	613 aa		0.56	□□□□□ -2.32
snR62	snR62	YMR084W	A2P2R3	262 aa		0.55	□□□□□ -2.32
snR62	snR62	RPL42A	P0CX27	106 aa	Known RBP	0.55	□□□□□ -2.32
snR62	snR62	RPL42B	P0CX28	106 aa	Known RBP	0.55	□□□□□ -2.32
snR62	snR62	FEN2	P25621	512 aa	Known RBP	0.55	□□□□□ -2.32
snR62	snR62	MSS1	P32559	526 aa	Predicted RBP	0.55	□□□□□ -2.32
snR62	snR62	SEC6	P32844	805 aa		0.55	□□□□□ -2.32
snR62	snR62	RPT3	P33298	428 aa	Known RBP	0.55	□□□□□ -2.32
snR62	snR62	YBR184W	P38299	523 aa		0.55	□□□□□ -2.32
snR62	snR62	IRC7	P43623	340 aa		0.55	□□□□□ -2.32
snR62	snR62	ORC4	P54791	529 aa		0.55	□□□□□ -2.32
snR62	snR62	DAK1	P54838	584 aa	Known RBP	0.55	□□□□□ -2.32
snR62	snR62	YLR352W	Q06479	807 aa		0.55	□□□□□ -2.32
snR62	snR62	ATX2	Q12067	313 aa		0.55	□□□□□ -2.32
snR62	snR62	YBR182C-A	Q8TGU6	64 aa		0.55	□□□□□ -2.32
snR62	snR62	CPA2	P03965	1118 aa	Known RBP	0.54	□□□□□ -2.32
snR62	snR62	SEC20	P28791	383 aa		0.54	□□□□□ -2.32
snR62	snR62	HBS1	P32769	611 aa	Known RBP	0.54	□□□□□ -2.32
snR62	snR62	YBR284W	P38150	797 aa		0.54	□□□□□ -2.32
snR62	snR62	SSF1	P38789	453 aa	Predicted RBP	0.54	□□□□□ -2.32
snR62	snR62	YJR107W	P47145	328 aa		0.54	□□□□□ -2.32
snR62	snR62	FAA4	P47912	694 aa	Known RBP	0.54	□□□□□ -2.32
snR62	snR62	COX18	P53239	316 aa		0.54	□□□□□ -2.32
snR62	snR62	REC102	Q02721	264 aa		0.54	□□□□□ -2.32
snR62	snR62	YPL071C	Q02864	156 aa		0.54	□□□□□ -2.32
snR62	snR62	FAL1	Q12099	399 aa	Known RBP	0.54	□□□□□ -2.32
snR62	snR62	NTH1	P32356	751 aa		0.53	□□□□□ -2.32
snR62	snR62	PIH1	P38768	344 aa		0.53	□□□□□ -2.32
snR62	snR62	YNL195C	P40168	261 aa		0.53	□□□□□ -2.32
snR62	snR62	THI6	P41835	540 aa		0.53	□□□□□ -2.32
snR62	snR62	RSC8	P43609	557 aa	Known RBP	0.53	□□□□□ -2.32
snR62	snR62	DIG1	Q03063	452 aa	Known RBP	0.53	□□□□□ -2.32
snR62	snR62	SHE9	Q04172	456 aa		0.53	□□□□□ -2.32
snR62	snR62	ACO1	P19414	778 aa	Known RBP RIP-Chip data	0.52	□□□□□ -2.33	not detected
snR62	snR62	COQ3	P27680	312 aa		0.52	□□□□□ -2.33
snR62	snR62	AKL1	P38080	1108 aa	Known RBP	0.52	□□□□□ -2.33
snR62	snR62	YIL077C	P40508	320 aa		0.52	□□□□□ -2.33
snR62	snR62	RLP7	P40693	322 aa	Known RBP	0.52	□□□□□ -2.33
snR62	snR62	YFL015C	P43578	164 aa		0.52	□□□□□ -2.33
snR62	snR62	YNL018C	P53976	612 aa		0.52	□□□□□ -2.33
snR62	snR62	SPN1	Q06505	410 aa	Predicted RBP	0.52	□□□□□ -2.33
snR62	snR62	TLG2	Q08144	397 aa		0.52	□□□□□ -2.33
snR62	snR62	DIF1	O13577	133 aa		0.51	□□□□□ -2.33
snR62	snR62	HES1	P35843	434 aa		0.51	□□□□□ -2.33
snR62	snR62	SWH1	P35845	1188 aa		0.51	□□□□□ -2.33
snR62	snR62	SCO2	P38072	301 aa		0.51	□□□□□ -2.33
snR62	snR62	YND1	P40009	630 aa		0.51	□□□□□ -2.33
snR62	snR62	RMD1	Q03441	430 aa		0.51	□□□□□ -2.33

Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms