RNA–Protein interactions for RNA: YPL047W

SGF11, Transcript of Integral subunit of SAGA histone acetyltransferase complex, yeastyeast

Gene SGF11, Length 300 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGF11YPL047W SNP1Q00916 300 aaPredicted RBP2.04□□□□□ -2.08
SGF11YPL047W NHX1Q04121 633 aa2.04□□□□□ -2.08
SGF11YPL047W UFO1Q04511 668 aa2.04□□□□□ -2.08
SGF11YPL047W RKI1Q12189 258 aa2.04□□□□□ -2.08
SGF11YPL047W AAD3P25612 363 aa2.03□□□□□ -2.08
SGF11YPL047W EUG1P32474 517 aa2.03□□□□□ -2.08
SGF11YPL047W SEC6P32844 805 aa2.03□□□□□ -2.08
SGF11YPL047W YIL077CP40508 320 aa2.03□□□□□ -2.08
SGF11YPL047W SET2P46995 733 aaKnown RBP2.03□□□□□ -2.08
SGF11YPL047W ATP23P53722 227 aa2.03□□□□□ -2.08
SGF11YPL047W ARG7Q04728 441 aa2.03□□□□□ -2.08
SGF11YPL047W POM34Q12445 299 aa2.03□□□□□ -2.08
SGF11YPL047W ERG20P08524 352 aaKnown RBP2.02□□□□□ -2.09
SGF11YPL047W MRPL9P31334 269 aa2.02□□□□□ -2.09
SGF11YPL047W BEM3P32873 1128 aa2.02□□□□□ -2.09
SGF11YPL047W COS111P38308 924 aa2.02□□□□□ -2.09
SGF11YPL047W DOT6P40059 670 aaKnown RBP2.02□□□□□ -2.09
SGF11YPL047W IRC8P47046 822 aa2.02□□□□□ -2.09
SGF11YPL047W DAK1P54838 584 aaKnown RBP2.02□□□□□ -2.09
SGF11YPL047W ARP4P80428 489 aa2.02□□□□□ -2.09
SGF11YPL047W LEE1Q02799 301 aaKnown RBP2.02□□□□□ -2.09
SGF11YPL047W ISA1Q07821 250 aaPredicted RBP2.02□□□□□ -2.09
SGF11YPL047W CDC9P04819 755 aa2.01□□□□□ -2.09
SGF11YPL047W STE4P18851 423 aa2.01□□□□□ -2.09
SGF11YPL047W GSY1P23337 708 aa2.01□□□□□ -2.09
SGF11YPL047W YEL1P34225 687 aa2.01□□□□□ -2.09
SGF11YPL047W ELF1P36053 145 aa2.01□□□□□ -2.09
SGF11YPL047W RIM4P38741 713 aa2.01□□□□□ -2.09
SGF11YPL047W THI6P41835 540 aa2.01□□□□□ -2.09
SGF11YPL047W PIP2P52960 996 aa2.01□□□□□ -2.09
SGF11YPL047W YGL117WP53133 265 aa2.01□□□□□ -2.09
SGF11YPL047W CPR8P53728 308 aa2.01□□□□□ -2.09
SGF11YPL047W YFT2Q06676 274 aa2.01□□□□□ -2.09
SGF11YPL047W CDC53Q12018 815 aaKnown RBP2.01□□□□□ -2.09
SGF11YPL047W RPS9BP05755 195 aaKnown RBP2□□□□□ -2.09
SGF11YPL047W TUP1P16649 713 aa2□□□□□ -2.09
SGF11YPL047W MIH1P23748 554 aa2□□□□□ -2.09
SGF11YPL047W TSR4P25040 408 aa2□□□□□ -2.09
SGF11YPL047W KIN82P25341 720 aa2□□□□□ -2.09
SGF11YPL047W HOG1P32485 435 aa2□□□□□ -2.09
SGF11YPL047W MSS1P32559 526 aaPredicted RBP2□□□□□ -2.09
SGF11YPL047W CHZ1P40019 153 aaPredicted RBP2□□□□□ -2.09
SGF11YPL047W SNF12P53628 566 aa2□□□□□ -2.09
SGF11YPL047W BRE5P53741 515 aaKnown RBP2□□□□□ -2.09
SGF11YPL047W ERG13P54839 491 aaKnown RBP2□□□□□ -2.09
SGF11YPL047W GPD1Q00055 391 aaKnown RBP2□□□□□ -2.09
SGF11YPL047W TRS23Q03784 219 aa2□□□□□ -2.09
SGF11YPL047W NEW1Q08972 1196 aaKnown RBP2□□□□□ -2.09
SGF11YPL047W ECM32P32644 1121 aaKnown RBP1.99□□□□□ -2.09
SGF11YPL047W MNN4P36044 1178 aa1.99□□□□□ -2.09
SGF11YPL047W AKL1P38080 1108 aaKnown RBP1.99□□□□□ -2.09
SGF11YPL047W PIH1P38768 344 aa1.99□□□□□ -2.09
SGF11YPL047W SSZ1P38788 538 aaKnown RBP1.99□□□□□ -2.09
SGF11YPL047W SPC97P38863 823 aa1.99□□□□□ -2.09
SGF11YPL047W YHR202WP38887 602 aa1.99□□□□□ -2.09
SGF11YPL047W DSS1P39112 969 aa1.99□□□□□ -2.09
SGF11YPL047W SNO3P43544 222 aa1.99□□□□□ -2.09
SGF11YPL047W NMD5P46970 1048 aa1.99□□□□□ -2.09
SGF11YPL047W BIT61P47041 543 aa1.99□□□□□ -2.09
SGF11YPL047W VBA4Q04602 768 aaKnown RBP1.99□□□□□ -2.09
SGF11YPL047W IZH3Q07959 543 aa1.99□□□□□ -2.09
SGF11YPL047W VHS3Q08438 674 aa1.99□□□□□ -2.09
SGF11YPL047W FRE7Q12333 620 aa1.99□□□□□ -2.09
SGF11YPL047W ZPS1Q12512 249 aa1.99□□□□□ -2.09
SGF11YPL047W MDM12Q92328 271 aa1.99□□□□□ -2.09
SGF11YPL047W HEM1P09950 548 aaPredicted RBP1.98□□□□□ -2.09
SGF11YPL047W STI1P15705 589 aaKnown RBP RIP-Chip data1.98□□□□□ -2.09not detected
SGF11YPL047W APD1P38281 316 aa1.98□□□□□ -2.09
SGF11YPL047W JHD1P40034 492 aa1.98□□□□□ -2.09
SGF11YPL047W MNT3P40549 630 aa1.98□□□□□ -2.09
SGF11YPL047W MAL11P53048 616 aa1.98□□□□□ -2.09
SGF11YPL047W SCW4P53334 386 aaKnown RBP1.98□□□□□ -2.09
SGF11YPL047W PRS5Q12265 496 aaKnown RBP1.98□□□□□ -2.09
SGF11YPL047W YOR131CQ12486 218 aa1.98□□□□□ -2.09
SGF11YPL047W SRD1P09007 221 aa1.97□□□□□ -2.09
SGF11YPL047W ERR1P0CX10 437 aa1.97□□□□□ -2.09
SGF11YPL047W ERR2P0CX11 437 aa1.97□□□□□ -2.09
SGF11YPL047W FRS1P15624 595 aaKnown RBP1.97□□□□□ -2.09
SGF11YPL047W PMA2P19657 947 aa1.97□□□□□ -2.09
SGF11YPL047W PRP22P24384 1145 aaKnown RBP1.97□□□□□ -2.09
SGF11YPL047W PET127P32606 800 aa1.97□□□□□ -2.09
SGF11YPL047W RPC34P32910 317 aa1.97□□□□□ -2.09
SGF11YPL047W YKR075CP36155 307 aa1.97□□□□□ -2.09
SGF11YPL047W PXL1P36166 706 aa1.97□□□□□ -2.09
SGF11YPL047W PCI8P40512 444 aa1.97□□□□□ -2.09
SGF11YPL047W NSE3Q05541 303 aa1.97□□□□□ -2.09
SGF11YPL047W LEU2P04173 364 aaPredicted RBP1.96□□□□□ -2.1
SGF11YPL047W RPL7AP05737 244 aaKnown RBP1.96□□□□□ -2.1
SGF11YPL047W URE2P23202 354 aaKnown RBP1.96□□□□□ -2.1
SGF11YPL047W ASK1P35734 292 aa1.96□□□□□ -2.1
SGF11YPL047W YJL043WP47053 257 aa1.96□□□□□ -2.1
SGF11YPL047W YJR039WP47107 1121 aa1.96□□□□□ -2.1
SGF11YPL047W LSC1P53598 329 aaKnown RBP1.96□□□□□ -2.1
SGF11YPL047W GIS2P53849 153 aaKnown RBP RIP-Chip data1.96□□□□□ -2.1 RIP-Chip
SGF11YPL047W ENT2Q05785 613 aa1.96□□□□□ -2.1
SGF11YPL047W YDL073WQ07454 984 aa1.96□□□□□ -2.1
SGF11YPL047W RPL7BQ12213 244 aaKnown RBP1.96□□□□□ -2.1
SGF11YPL047W YMR084WA2P2R3 262 aa1.95□□□□□ -2.1
SGF11YPL047W CPA2P03965 1118 aaKnown RBP1.95□□□□□ -2.1
SGF11YPL047W AQY1P0CD91 305 aa1.95□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms