RNA–Protein interactions for RNA: YPL002C

SNF8, Transcript of Component of the ESCRT-II complex, yeast

Gene SNF8, Length 702 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNF8	YPL002C	YBL028C	P38202	106 aa		4.97	□□□□□ -1.61
SNF8	YPL002C	STU2	P46675	888 aa		4.97	□□□□□ -1.61
SNF8	YPL002C	GND2	P53319	492 aa		4.97	□□□□□ -1.61
SNF8	YPL002C	IRC10	Q08118	586 aa		4.97	□□□□□ -1.61
SNF8	YPL002C	MET7	Q08645	548 aa		4.97	□□□□□ -1.61
SNF8	YPL002C	FRE5	Q08908	694 aa		4.97	□□□□□ -1.61
SNF8	YPL002C	SUT2	Q12286	268 aa		4.97	□□□□□ -1.61
SNF8	YPL002C	FLO1	P32768	1537 aa		4.97	□□□□□ -1.61
SNF8	YPL002C	TOR2	P32600	2474 aa	Known RBP	4.97	□□□□□ -1.61
SNF8	YPL002C	MTH1	P35198	433 aa		4.96	□□□□□ -1.62
SNF8	YPL002C	NOP2	P40991	618 aa	Known RBP	4.96	□□□□□ -1.62
SNF8	YPL002C	TIM44	Q01852	431 aa		4.96	□□□□□ -1.62
SNF8	YPL002C	UBX5	Q06682	500 aa		4.96	□□□□□ -1.62
SNF8	YPL002C	YHR078W	P38799	552 aa		4.95	□□□□□ -1.62
SNF8	YPL002C	UBP12	P39538	1254 aa		4.95	□□□□□ -1.62
SNF8	YPL002C	ELO3	P40319	345 aa		4.95	□□□□□ -1.62
SNF8	YPL002C	FKH2	P41813	862 aa		4.95	□□□□□ -1.62
SNF8	YPL002C	SNU71	P53207	620 aa	Known RBP	4.95	□□□□□ -1.62
SNF8	YPL002C	UTP8	P53276	713 aa	Known RBP	4.95	□□□□□ -1.62
SNF8	YPL002C	THI22	Q06490	572 aa		4.95	□□□□□ -1.62
SNF8	YPL002C	RTT109	Q07794	436 aa		4.95	□□□□□ -1.62
SNF8	YPL002C	PCL8	Q08966	492 aa		4.95	□□□□□ -1.62
SNF8	YPL002C	ENV7	Q12003	364 aa		4.95	□□□□□ -1.62
SNF8	YPL002C	MDM20	Q12387	796 aa	Known RBP	4.95	□□□□□ -1.62
SNF8	YPL002C	RPS9A	O13516	197 aa	Known RBP	4.94	□□□□□ -1.62
SNF8	YPL002C	MET3	P08536	511 aa		4.94	□□□□□ -1.62
SNF8	YPL002C	MSD1	P15179	658 aa	Known RBP	4.94	□□□□□ -1.62
SNF8	YPL002C	PER1	P25625	357 aa		4.94	□□□□□ -1.62
SNF8	YPL002C	SPC42	P36094	363 aa		4.94	□□□□□ -1.62
SNF8	YPL002C	RPP1	P38786	293 aa		4.94	□□□□□ -1.62
SNF8	YPL002C	BRE5	P53741	515 aa	Known RBP	4.94	□□□□□ -1.62
SNF8	YPL002C	DLT1	Q04216	342 aa		4.94	□□□□□ -1.62
SNF8	YPL002C	VMA2	P16140	517 aa	Known RBP	4.93	□□□□□ -1.62
SNF8	YPL002C	PTK1	P36002	662 aa	Predicted RBP	4.93	□□□□□ -1.62
SNF8	YPL002C	PET10	P36139	283 aa		4.93	□□□□□ -1.62
SNF8	YPL002C	FUN12	P39730	1002 aa	Known RBP	4.93	□□□□□ -1.62
SNF8	YPL002C	ATF1	P40353	525 aa		4.93	□□□□□ -1.62
SNF8	YPL002C	VHR1	P40522	640 aa		4.93	□□□□□ -1.62
SNF8	YPL002C	MUP1	P50276	574 aa		4.93	□□□□□ -1.62
SNF8	YPL002C	ADY4	Q05955	493 aa		4.93	□□□□□ -1.62
SNF8	YPL002C	SSF2	Q12153	453 aa	Predicted RBP	4.93	□□□□□ -1.62
SNF8	YPL002C	HAL9	Q12180	1030 aa		4.93	□□□□□ -1.62
SNF8	YPL002C	RRI2	Q12348	645 aa		4.93	□□□□□ -1.62
SNF8	YPL002C	HBN1	Q96VH4	193 aa		4.93	□□□□□ -1.62
SNF8	YPL002C	HIP1	P06775	603 aa		4.92	□□□□□ -1.62
SNF8	YPL002C	MPH2	P0CD99	609 aa		4.92	□□□□□ -1.62
SNF8	YPL002C	TOP3	P13099	656 aa		4.92	□□□□□ -1.62
SNF8	YPL002C	RPL8B	P29453	256 aa	Known RBP	4.92	□□□□□ -1.62
SNF8	YPL002C	SWC3	P31376	625 aa		4.92	□□□□□ -1.62
SNF8	YPL002C	CDC11	P32458	415 aa		4.92	□□□□□ -1.62
SNF8	YPL002C	EUG1	P32474	517 aa		4.92	□□□□□ -1.62
SNF8	YPL002C	SDS3	P40505	327 aa		4.92	□□□□□ -1.62
SNF8	YPL002C	YIR042C	P40586	236 aa		4.92	□□□□□ -1.62
SNF8	YPL002C	PUS2	P53167	370 aa		4.92	□□□□□ -1.62
SNF8	YPL002C	ASI2	P53895	289 aa		4.92	□□□□□ -1.62
SNF8	YPL002C	INM2	Q05533	292 aa		4.92	□□□□□ -1.62
SNF8	YPL002C	YDL124W	Q07551	312 aa	Known RBP	4.92	□□□□□ -1.62
SNF8	YPL002C	DUR1,2	P32528	1835 aa	Known RBP	4.92	□□□□□ -1.62
SNF8	YPL002C	TUS1	Q06412	1307 aa		4.92	□□□□□ -1.62
SNF8	YPL002C	SNF3	P10870	884 aa		4.91	□□□□□ -1.62
SNF8	YPL002C	CST26	P38226	397 aa		4.91	□□□□□ -1.62
SNF8	YPL002C	YBR053C	P38235	358 aa		4.91	□□□□□ -1.62
SNF8	YPL002C	TOM71	P38825	639 aa	Known RBP	4.91	□□□□□ -1.62
SNF8	YPL002C	YHR131C	P38835	850 aa		4.91	□□□□□ -1.62
SNF8	YPL002C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
SNF8	YPL002C	PIP2	P52960	996 aa		4.91	□□□□□ -1.62
SNF8	YPL002C	EAF1	Q06337	982 aa		4.91	□□□□□ -1.62
SNF8	YPL002C	PIF1	P07271	859 aa		4.9	□□□□□ -1.63
SNF8	YPL002C	HEM1	P09950	548 aa	Predicted RBP	4.9	□□□□□ -1.63
SNF8	YPL002C	SEC18	P18759	758 aa	Known RBP	4.9	□□□□□ -1.63
SNF8	YPL002C	CYS3	P31373	394 aa	Known RBP	4.9	□□□□□ -1.63
SNF8	YPL002C	RGT1	P32862	1170 aa		4.9	□□□□□ -1.63
SNF8	YPL002C	KSP1	P38691	1029 aa	Known RBP	4.9	□□□□□ -1.63
SNF8	YPL002C	AFG3	P39925	761 aa		4.9	□□□□□ -1.63
SNF8	YPL002C	HBT1	Q07653	1046 aa	Known RBP	4.9	□□□□□ -1.63
SNF8	YPL002C	SRP40	P32583	406 aa	Predicted RBP	4.89	□□□□□ -1.63
SNF8	YPL002C	YKR018C	P36114	725 aa		4.89	□□□□□ -1.63
SNF8	YPL002C	YHL017W	P38745	532 aa		4.89	□□□□□ -1.63
SNF8	YPL002C	ERP6	P53198	216 aa		4.89	□□□□□ -1.63
SNF8	YPL002C	LGE1	Q02796	332 aa	Known RBP	4.89	□□□□□ -1.63
SNF8	YPL002C	NAN1	Q02931	896 aa	Known RBP	4.89	□□□□□ -1.63
SNF8	YPL002C	MUS81	Q04149	632 aa	Predicted RBP	4.89	□□□□□ -1.63
SNF8	YPL002C	KEL3	Q08979	651 aa	Predicted RBP	4.89	□□□□□ -1.63
SNF8	YPL002C	YOR022C	Q12204	715 aa		4.89	□□□□□ -1.63
SNF8	YPL002C	ECM29	P38737	1868 aa		4.89	□□□□□ -1.63
SNF8	YPL002C	TEL1	P38110	2787 aa		4.89	□□□□□ -1.63
SNF8	YPL002C	CYB2	P00175	591 aa		4.88	□□□□□ -1.63
SNF8	YPL002C	RAD24	P32641	659 aa		4.88	□□□□□ -1.63
SNF8	YPL002C	GGA2	P38817	585 aa	Known RBP	4.88	□□□□□ -1.63
SNF8	YPL002C	DAS1	P47005	663 aa		4.88	□□□□□ -1.63
SNF8	YPL002C	SPO75	Q07798	868 aa		4.88	□□□□□ -1.63
SNF8	YPL002C	MRH1	Q12117	320 aa	Predicted RBP	4.88	□□□□□ -1.63
SNF8	YPL002C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.88	□□□□□ -1.63	not detected
SNF8	YPL002C	YDR034W-B	Q6Q5X2	51 aa		4.88	□□□□□ -1.63
SNF8	YPL002C	KRS1	P15180	591 aa	Known RBP	4.87	□□□□□ -1.63
SNF8	YPL002C	DAL7	P21826	554 aa		4.87	□□□□□ -1.63
SNF8	YPL002C	YCL002C	P25565	263 aa		4.87	□□□□□ -1.63
SNF8	YPL002C	ARE1	P25628	610 aa		4.87	□□□□□ -1.63
SNF8	YPL002C	NOC2	P39744	710 aa	Known RBP	4.87	□□□□□ -1.63
SNF8	YPL002C	JHD1	P40034	492 aa		4.87	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms