RNA–Protein interactions for RNA: YOR339C

UBC11, Transcript of Ubiquitin-conjugating enzyme, yeastyeast

Gene UBC11, Length 471 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC11YOR339C APM4Q99186 491 aa6.16□□□□□ -1.42
UBC11YOR339C ATP1P07251 545 aaKnown RBP6.15□□□□□ -1.42
UBC11YOR339C GFA1P14742 717 aaKnown RBP6.15□□□□□ -1.42
UBC11YOR339C KGD2P19262 463 aaPredicted RBP6.15□□□□□ -1.42
UBC11YOR339C URK1P27515 501 aa6.15□□□□□ -1.42
UBC11YOR339C VPH1P32563 840 aaKnown RBP6.15□□□□□ -1.42
UBC11YOR339C PEP7P32609 515 aa6.15□□□□□ -1.42
UBC11YOR339C ABZ1P37254 787 aaPredicted RBP6.15□□□□□ -1.42
UBC11YOR339C YBR056WP38081 501 aa6.15□□□□□ -1.42
UBC11YOR339C SIF2P38262 535 aa6.15□□□□□ -1.42
UBC11YOR339C RRT2P38332 387 aa6.15□□□□□ -1.42
UBC11YOR339C HIS2P38635 335 aa6.15□□□□□ -1.42
UBC11YOR339C NDC80P40460 691 aa6.15□□□□□ -1.42
UBC11YOR339C ASG1P40467 964 aa6.15□□□□□ -1.42
UBC11YOR339C YIR016WP40572 265 aa6.15□□□□□ -1.42
UBC11YOR339C PFD1P46988 109 aa6.15□□□□□ -1.42
UBC11YOR339C BRO1P48582 844 aa6.15□□□□□ -1.42
UBC11YOR339C SLG1P54867 378 aa6.15□□□□□ -1.42
UBC11YOR339C ADA2Q02336 434 aa6.15□□□□□ -1.42
UBC11YOR339C YMR114CQ04471 368 aaKnown RBP6.15□□□□□ -1.42
UBC11YOR339C PRM6Q04705 352 aa6.15□□□□□ -1.42
UBC11YOR339C TAF10Q12030 206 aa6.15□□□□□ -1.42
UBC11YOR339C HRT3Q12347 344 aa6.15□□□□□ -1.42
UBC11YOR339C EMP46Q12396 444 aa6.15□□□□□ -1.42
UBC11YOR339C TAO3P40468 2376 aa6.14□□□□□ -1.43
UBC11YOR339C MAS1P10507 462 aa6.14□□□□□ -1.43
UBC11YOR339C IDI1P15496 288 aa6.14□□□□□ -1.43
UBC11YOR339C RAD27P26793 382 aa6.14□□□□□ -1.43
UBC11YOR339C SPT5P27692 1063 aaKnown RBP6.14□□□□□ -1.43
UBC11YOR339C PAP1P29468 568 aaKnown RBP6.14□□□□□ -1.43
UBC11YOR339C DBF4P32325 704 aa6.14□□□□□ -1.43
UBC11YOR339C ABD1P32783 436 aaPredicted RBP6.14□□□□□ -1.43
UBC11YOR339C SMF1P38925 575 aa6.14□□□□□ -1.43
UBC11YOR339C SPC72P39723 622 aa6.14□□□□□ -1.43
UBC11YOR339C TMN3P40071 706 aa6.14□□□□□ -1.43
UBC11YOR339C MMF1P40185 145 aaKnown RBP6.14□□□□□ -1.43
UBC11YOR339C SNZ3P43545 298 aa6.14□□□□□ -1.43
UBC11YOR339C SNZ2P53824 298 aa6.14□□□□□ -1.43
UBC11YOR339C ATG16Q03818 150 aa6.14□□□□□ -1.43
UBC11YOR339C SPO71Q03868 1245 aa6.14□□□□□ -1.43
UBC11YOR339C LEA1Q08963 238 aaPredicted RBP6.14□□□□□ -1.43
UBC11YOR339C YLR462WO13556 202 aa6.13□□□□□ -1.43
UBC11YOR339C ADE3P07245 946 aaKnown RBP6.13□□□□□ -1.43
UBC11YOR339C PUT4P15380 627 aa6.13□□□□□ -1.43
UBC11YOR339C PGS1P25578 521 aa6.13□□□□□ -1.43
UBC11YOR339C COQ8P27697 501 aa6.13□□□□□ -1.43
UBC11YOR339C SRB2P34162 210 aa6.13□□□□□ -1.43
UBC11YOR339C EDS1P38073 919 aa6.13□□□□□ -1.43
UBC11YOR339C RCK2P38623 610 aa6.13□□□□□ -1.43
UBC11YOR339C APM2P38700 605 aa6.13□□□□□ -1.43
UBC11YOR339C YHL049CP38722 271 aa6.13□□□□□ -1.43
UBC11YOR339C LCP5P40079 357 aaPredicted RBP6.13□□□□□ -1.43
UBC11YOR339C YER189WP40104 122 aa6.13□□□□□ -1.43
UBC11YOR339C CDC1P40986 491 aa6.13□□□□□ -1.43
UBC11YOR339C MAF1P41910 395 aa6.13□□□□□ -1.43
UBC11YOR339C YFL064CP43540 174 aa6.13□□□□□ -1.43
UBC11YOR339C TAF1P46677 1066 aa6.13□□□□□ -1.43
UBC11YOR339C SXM1Q04175 944 aaKnown RBP6.13□□□□□ -1.43
UBC11YOR339C ERV41Q04651 352 aa6.13□□□□□ -1.43
UBC11YOR339C TAF9Q05027 157 aa6.13□□□□□ -1.43
UBC11YOR339C RCL1Q08096 367 aaPredicted RBP6.13□□□□□ -1.43
UBC11YOR339C AIM39Q08223 395 aa6.13□□□□□ -1.43
UBC11YOR339C DDC1Q08949 612 aa6.13□□□□□ -1.43
UBC11YOR339C YRR1Q12172 810 aa6.13□□□□□ -1.43
UBC11YOR339C YBL111CQ3E7Y5 667 aa6.13□□□□□ -1.43
UBC11YOR339C POL3P15436 1097 aa6.12□□□□□ -1.43
UBC11YOR339C AEP2P22136 580 aa6.12□□□□□ -1.43
UBC11YOR339C TRX1P22217 103 aaKnown RBP6.12□□□□□ -1.43
UBC11YOR339C SEC1P30619 724 aaKnown RBP6.12□□□□□ -1.43
UBC11YOR339C YBL055CP34220 418 aaPredicted RBP6.12□□□□□ -1.43
UBC11YOR339C SEG2P34250 1132 aa6.12□□□□□ -1.43
UBC11YOR339C RGD1P38339 666 aa6.12□□□□□ -1.43
UBC11YOR339C REI1P38344 393 aaPredicted RBP6.12□□□□□ -1.43
UBC11YOR339C STB5P38699 743 aa6.12□□□□□ -1.43
UBC11YOR339C RAD55P38953 406 aa6.12□□□□□ -1.43
UBC11YOR339C AVT2P39981 480 aa6.12□□□□□ -1.43
UBC11YOR339C CWC22P53333 577 aaKnown RBP6.12□□□□□ -1.43
UBC11YOR339C NOG2P53742 486 aaKnown RBP6.12□□□□□ -1.43
UBC11YOR339C YPL062WQ02781 134 aa6.12□□□□□ -1.43
UBC11YOR339C ELP3Q02908 557 aaKnown RBP6.12□□□□□ -1.43
UBC11YOR339C UFO1Q04511 668 aa6.12□□□□□ -1.43
UBC11YOR339C POB3Q04636 552 aaKnown RBP6.12□□□□□ -1.43
UBC11YOR339C IVY1Q04934 453 aa6.12□□□□□ -1.43
UBC11YOR339C YLR257WQ06146 321 aaKnown RBP6.12□□□□□ -1.43
UBC11YOR339C PUF3Q07807 879 aaKnown RBP RIP-Chip data6.12□□□□□ -1.43not detected
UBC11YOR339C NBP2Q12163 236 aa6.12□□□□□ -1.43
UBC11YOR339C MNL2Q12205 849 aa6.12□□□□□ -1.43
UBC11YOR339C SPO21Q12411 609 aa6.12□□□□□ -1.43
UBC11YOR339C PDE1P22434 369 aa6.11□□□□□ -1.43
UBC11YOR339C STE11P23561 717 aa6.11□□□□□ -1.43
UBC11YOR339C PEX1P24004 1043 aa6.11□□□□□ -1.43
UBC11YOR339C DPB3P27344 201 aa6.11□□□□□ -1.43
UBC11YOR339C CAP1P28495 268 aaKnown RBP6.11□□□□□ -1.43
UBC11YOR339C MET4P32389 672 aa6.11□□□□□ -1.43
UBC11YOR339C YBR053CP38235 358 aa6.11□□□□□ -1.43
UBC11YOR339C HSL7P38274 827 aa6.11□□□□□ -1.43
UBC11YOR339C PMC1P38929 1173 aaPredicted RBP6.11□□□□□ -1.43
UBC11YOR339C FHL1P39521 936 aa6.11□□□□□ -1.43
UBC11YOR339C KHA1P40309 873 aa6.11□□□□□ -1.43
UBC11YOR339C PRK1P40494 810 aa6.11□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms