RNA–Protein interactions for RNA: YNL039W

BDP1, Transcript of Essential subunit of RNA polymerase III transcription factor (TFIIIB), yeast

Gene BDP1, Length 1,785 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BDP1	YNL039W	RBG2	P53295	368 aa	Known RBP	5.22	□□□□□ -1.57
BDP1	YNL039W	CBK1	P53894	756 aa		5.22	□□□□□ -1.57
BDP1	YNL039W	TDA9	Q04545	1251 aa		5.22	□□□□□ -1.57
BDP1	YNL039W	TRI1	Q05024	226 aa		5.22	□□□□□ -1.57
BDP1	YNL039W	IWR1	Q07532	353 aa	Predicted RBP	5.22	□□□□□ -1.57
BDP1	YNL039W	GPR1	Q12361	961 aa		5.22	□□□□□ -1.57
BDP1	YNL039W	SEM1	O94742	89 aa		5.21	□□□□□ -1.57
BDP1	YNL039W	SIR1	P21691	654 aa		5.21	□□□□□ -1.57
BDP1	YNL039W	CMK1	P27466	446 aa	Known RBP	5.21	□□□□□ -1.57
BDP1	YNL039W	IFA38	P38286	347 aa		5.21	□□□□□ -1.57
BDP1	YNL039W	UBS1	P38290	277 aa		5.21	□□□□□ -1.57
BDP1	YNL039W	YHR078W	P38799	552 aa		5.21	□□□□□ -1.57
BDP1	YNL039W	PEX7	P39108	375 aa		5.21	□□□□□ -1.57
BDP1	YNL039W	GID8	P40208	455 aa		5.21	□□□□□ -1.57
BDP1	YNL039W	SDP1	P40479	209 aa		5.21	□□□□□ -1.57
BDP1	YNL039W	YNR071C	P53757	342 aa		5.21	□□□□□ -1.57
BDP1	YNL039W	RCM1	P53972	490 aa		5.21	□□□□□ -1.57
BDP1	YNL039W	NSE5	Q03718	556 aa		5.21	□□□□□ -1.57
BDP1	YNL039W	RSM24	Q03976	319 aa		5.21	□□□□□ -1.57
BDP1	YNL039W	ARA2	Q04212	335 aa		5.21	□□□□□ -1.57
BDP1	YNL039W	CSR1	Q06705	408 aa	Known RBP	5.21	□□□□□ -1.57
BDP1	YNL039W	ISA1	Q07821	250 aa	Predicted RBP	5.21	□□□□□ -1.57
BDP1	YNL039W	SCM3	Q12334	223 aa		5.21	□□□□□ -1.57
BDP1	YNL039W	AI3	P03877	415 aa		5.21	□□□□□ -1.58
BDP1	YNL039W	MRPL36	P36531	177 aa		5.21	□□□□□ -1.58
BDP1	YNL039W	NPR3	P38742	1146 aa		5.21	□□□□□ -1.58
BDP1	YNL039W	SAK1	P38990	1142 aa		5.21	□□□□□ -1.58
BDP1	YNL039W	UME6	P39001	836 aa		5.21	□□□□□ -1.58
BDP1	YNL039W	RRT6	P53117	311 aa	Predicted RBP	5.21	□□□□□ -1.58
BDP1	YNL039W	RSC1	P53236	928 aa		5.21	□□□□□ -1.58
BDP1	YNL039W	YAP1802	P53309	568 aa		5.21	□□□□□ -1.58
BDP1	YNL039W	SXM1	Q04175	944 aa	Known RBP	5.21	□□□□□ -1.58
BDP1	YNL039W	ASM4	Q05166	528 aa		5.21	□□□□□ -1.58
BDP1	YNL039W	TRE1	Q08919	783 aa		5.21	□□□□□ -1.58
BDP1	YNL039W	CDC16	P09798	840 aa		5.2	□□□□□ -1.58
BDP1	YNL039W	HOM3	P10869	527 aa		5.2	□□□□□ -1.58
BDP1	YNL039W	IME1	P21190	360 aa		5.2	□□□□□ -1.58
BDP1	YNL039W	PET127	P32606	800 aa		5.2	□□□□□ -1.58
BDP1	YNL039W	ATG19	P35193	415 aa		5.2	□□□□□ -1.58
BDP1	YNL039W	PZF1	P39933	429 aa		5.2	□□□□□ -1.58
BDP1	YNL039W	OYE3	P41816	400 aa	Predicted RBP	5.2	□□□□□ -1.58
BDP1	YNL039W	SPN1	Q06505	410 aa	Predicted RBP	5.2	□□□□□ -1.58
BDP1	YNL039W	TAH18	Q12181	623 aa		5.2	□□□□□ -1.58
BDP1	YNL039W	FUM1	P08417	488 aa	Known RBP	5.19	□□□□□ -1.58
BDP1	YNL039W	MET8	P15807	274 aa		5.19	□□□□□ -1.58
BDP1	YNL039W	PGS1	P25578	521 aa		5.19	□□□□□ -1.58
BDP1	YNL039W	CBF2	P32504	956 aa		5.19	□□□□□ -1.58
BDP1	YNL039W	YKL050C	P35736	922 aa		5.19	□□□□□ -1.58
BDP1	YNL039W	YBR138C	P38277	524 aa		5.19	□□□□□ -1.58
BDP1	YNL039W	YHR033W	P38690	423 aa		5.19	□□□□□ -1.58
BDP1	YNL039W	TAF4	P50105	388 aa		5.19	□□□□□ -1.58
BDP1	YNL039W	YBP2	P53169	641 aa		5.19	□□□□□ -1.58
BDP1	YNL039W	MRPL19	P53875	158 aa		5.19	□□□□□ -1.58
BDP1	YNL039W	YLR287C	Q05881	355 aa		5.19	□□□□□ -1.58
BDP1	YNL039W	PYC1	P11154	1178 aa	Known RBP	5.19	□□□□□ -1.58
BDP1	YNL039W	FRS1	P15624	595 aa	Known RBP	5.19	□□□□□ -1.58
BDP1	YNL039W	CWH43	P25618	953 aa		5.19	□□□□□ -1.58
BDP1	YNL039W	DHR2	P36009	735 aa	Predicted RBP	5.19	□□□□□ -1.58
BDP1	YNL039W	PTC7	P38797	343 aa		5.19	□□□□□ -1.58
BDP1	YNL039W	GTS1	P40956	396 aa		5.19	□□□□□ -1.58
BDP1	YNL039W	IRC6	P43615	237 aa		5.19	□□□□□ -1.58
BDP1	YNL039W	ARI1	P53111	347 aa	Known RBP	5.19	□□□□□ -1.58
BDP1	YNL039W	PEF1	P53238	335 aa		5.19	□□□□□ -1.58
BDP1	YNL039W	YNR014W	P53719	212 aa		5.19	□□□□□ -1.58
BDP1	YNL039W	TIM50	Q02776	476 aa		5.19	□□□□□ -1.58
BDP1	YNL039W	RCR2	Q03446	210 aa	Known RBP	5.19	□□□□□ -1.58
BDP1	YNL039W	YKU80	Q04437	629 aa		5.19	□□□□□ -1.58
BDP1	YNL039W	YLR352W	Q06479	807 aa		5.19	□□□□□ -1.58
BDP1	YNL039W	AAD4	Q07747	329 aa		5.19	□□□□□ -1.58
BDP1	YNL039W	ATG11	Q12527	1178 aa		5.19	□□□□□ -1.58
BDP1	YNL039W	HSH49	Q99181	213 aa	Predicted RBP	5.19	□□□□□ -1.58
BDP1	YNL039W	SPE1	P08432	466 aa		5.18	□□□□□ -1.58
BDP1	YNL039W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	5.18	□□□□□ -1.58	not detected
BDP1	YNL039W	BET2	P20133	325 aa		5.18	□□□□□ -1.58
BDP1	YNL039W	PEX5	P35056	612 aa		5.18	□□□□□ -1.58
BDP1	YNL039W	PFA3	P42836	336 aa		5.18	□□□□□ -1.58
BDP1	YNL039W	MUS81	Q04149	632 aa	Predicted RBP	5.18	□□□□□ -1.58
BDP1	YNL039W	TAF11	Q04226	346 aa		5.18	□□□□□ -1.58
BDP1	YNL039W	HOS1	Q12214	470 aa		5.18	□□□□□ -1.58
BDP1	YNL039W	FUR1	P18562	216 aa	Known RBP	5.17	□□□□□ -1.58
BDP1	YNL039W	RAD16	P31244	790 aa		5.17	□□□□□ -1.58
BDP1	YNL039W	TEF4	P36008	412 aa	Known RBP	5.17	□□□□□ -1.58
BDP1	YNL039W	SET3	P36124	751 aa		5.17	□□□□□ -1.58
BDP1	YNL039W	AKR1	P39010	764 aa		5.17	□□□□□ -1.58
BDP1	YNL039W	CCT3	P39077	534 aa	Known RBP	5.17	□□□□□ -1.58
BDP1	YNL039W	BUD8	P41698	603 aa		5.17	□□□□□ -1.58
BDP1	YNL039W	PXA1	P41909	870 aa		5.17	□□□□□ -1.58
BDP1	YNL039W	PPN1	Q04119	674 aa		5.17	□□□□□ -1.58
BDP1	YNL039W	YCG1	Q06680	1035 aa		5.17	□□□□□ -1.58
BDP1	YNL039W	CRD1	Q07560	283 aa		5.17	□□□□□ -1.58
BDP1	YNL039W	ADE3	P07245	946 aa	Known RBP	5.16	□□□□□ -1.58
BDP1	YNL039W	RIT1	P23796	513 aa		5.16	□□□□□ -1.58
BDP1	YNL039W	SWI4	P25302	1093 aa	Known RBP	5.16	□□□□□ -1.58
BDP1	YNL039W	VMA8	P32610	256 aa	Known RBP	5.16	□□□□□ -1.58
BDP1	YNL039W	FRD1	P32614	470 aa	Known RBP	5.16	□□□□□ -1.58
BDP1	YNL039W	RPS0A	P32905	252 aa	Known RBP	5.16	□□□□□ -1.58
BDP1	YNL039W	PRM2	P40534	656 aa		5.16	□□□□□ -1.58
BDP1	YNL039W	MND2	P40577	368 aa		5.16	□□□□□ -1.58
BDP1	YNL039W	PRP31	P49704	494 aa	Predicted RBP	5.16	□□□□□ -1.58
BDP1	YNL039W	IMA1	P53051	589 aa		5.16	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms