RNA–Protein interactions for RNA: YMR118C

SHH3, Transcript of Putative mitochondrial inner membrane protein of unknown function, yeastyeast

Gene SHH3, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH3YMR118C YEL076C-AP0CX16 216 aa3.67□□□□□ -1.82
SHH3YMR118C YLR464WP0CX17 216 aa3.67□□□□□ -1.82
SHH3YMR118C GSY1P23337 708 aa3.67□□□□□ -1.82
SHH3YMR118C RPL5P26321 297 aaKnown RBP3.67□□□□□ -1.82
SHH3YMR118C EUG1P32474 517 aa3.67□□□□□ -1.82
SHH3YMR118C GCD6P32501 712 aaKnown RBP3.67□□□□□ -1.82
SHH3YMR118C TOA1P32773 286 aa3.67□□□□□ -1.82
SHH3YMR118C MRE11P32829 692 aa3.67□□□□□ -1.82
SHH3YMR118C TFC4P33339 1025 aa3.67□□□□□ -1.82
SHH3YMR118C YKL050CP35736 922 aa3.67□□□□□ -1.82
SHH3YMR118C YKR075CP36155 307 aa3.67□□□□□ -1.82
SHH3YMR118C ECM4P36156 370 aa3.67□□□□□ -1.82
SHH3YMR118C HSM3P38348 480 aa3.67□□□□□ -1.82
SHH3YMR118C MMS21P38632 267 aa3.67□□□□□ -1.82
SHH3YMR118C HIS2P38635 335 aa3.67□□□□□ -1.82
SHH3YMR118C YHL049CP38722 271 aa3.67□□□□□ -1.82
SHH3YMR118C BEM4P39011 633 aa3.67□□□□□ -1.82
SHH3YMR118C SPC72P39723 622 aa3.67□□□□□ -1.82
SHH3YMR118C UBP5P39944 805 aa3.67□□□□□ -1.82
SHH3YMR118C YEL076CP39971 216 aa3.67□□□□□ -1.82
SHH3YMR118C YEL075CP39972 122 aa3.67□□□□□ -1.82
SHH3YMR118C LCP5P40079 357 aaPredicted RBP3.67□□□□□ -1.82
SHH3YMR118C YER189WP40104 122 aa3.67□□□□□ -1.82
SHH3YMR118C PSY2P40164 858 aa3.67□□□□□ -1.82
SHH3YMR118C SIP5P40210 489 aaKnown RBP3.67□□□□□ -1.82
SHH3YMR118C YIL165CP40446 119 aa3.67□□□□□ -1.82
SHH3YMR118C GCN20P43535 752 aaKnown RBP3.67□□□□□ -1.82
SHH3YMR118C YFL064CP43540 174 aa3.67□□□□□ -1.82
SHH3YMR118C BRO1P48582 844 aa3.67□□□□□ -1.82
SHH3YMR118C ZIP2P53061 704 aa3.67□□□□□ -1.82
SHH3YMR118C YNL040WP53960 456 aaPredicted RBP3.67□□□□□ -1.82
SHH3YMR118C RPL22BP56628 122 aaKnown RBP3.67□□□□□ -1.82
SHH3YMR118C RAT1Q02792 1006 aaKnown RBP3.67□□□□□ -1.82
SHH3YMR118C LGE1Q02796 332 aaKnown RBP3.67□□□□□ -1.82
SHH3YMR118C MTG1Q03151 367 aaPredicted RBP3.67□□□□□ -1.82
SHH3YMR118C ATP25Q03153 612 aa3.67□□□□□ -1.82
SHH3YMR118C INP2Q03824 705 aa3.67□□□□□ -1.82
SHH3YMR118C ARO80Q04052 950 aa3.67□□□□□ -1.82
SHH3YMR118C TCO89Q08921 799 aa3.67□□□□□ -1.82
SHH3YMR118C REC8Q12188 680 aa3.67□□□□□ -1.82
SHH3YMR118C MED1Q12321 566 aa3.67□□□□□ -1.82
SHH3YMR118C YBL111CQ3E7Y5 667 aa3.67□□□□□ -1.82
SHH3YMR118C ILV2P07342 687 aaKnown RBP3.66□□□□□ -1.82
SHH3YMR118C PEP5P12868 1029 aa3.66□□□□□ -1.82
SHH3YMR118C CLN3P13365 580 aa3.66□□□□□ -1.82
SHH3YMR118C TYR1P20049 452 aa3.66□□□□□ -1.82
SHH3YMR118C EFB1P32471 206 aaKnown RBP3.66□□□□□ -1.82
SHH3YMR118C CBF2P32504 956 aa3.66□□□□□ -1.82
SHH3YMR118C VPS35P34110 944 aa3.66□□□□□ -1.82
SHH3YMR118C LHS1P36016 881 aa3.66□□□□□ -1.82
SHH3YMR118C RRP14P36080 434 aaKnown RBP3.66□□□□□ -1.82
SHH3YMR118C PBP2P38151 413 aaKnown RBP RIP-Chip data3.66□□□□□ -1.82not detected
SHH3YMR118C RRT2P38332 387 aa3.66□□□□□ -1.82
SHH3YMR118C MSG5P38590 489 aa3.66□□□□□ -1.82
SHH3YMR118C ERP5P38819 212 aa3.66□□□□□ -1.82
SHH3YMR118C LAM1P38851 1228 aa3.66□□□□□ -1.82
SHH3YMR118C END3P39013 349 aa3.66□□□□□ -1.82
SHH3YMR118C ALG5P40350 334 aa3.66□□□□□ -1.82
SHH3YMR118C INP51P40559 946 aaKnown RBP3.66□□□□□ -1.82
SHH3YMR118C YFH7P43591 353 aa3.66□□□□□ -1.82
SHH3YMR118C COS5P47187 383 aa3.66□□□□□ -1.82
SHH3YMR118C NBP1P52919 319 aaPredicted RBP3.66□□□□□ -1.82
SHH3YMR118C TAF6P53040 516 aa3.66□□□□□ -1.82
SHH3YMR118C MCM6P53091 1017 aaKnown RBP3.66□□□□□ -1.82
SHH3YMR118C ATG1P53104 897 aa3.66□□□□□ -1.82
SHH3YMR118C GUP1P53154 560 aa3.66□□□□□ -1.82
SHH3YMR118C HOP2P53187 214 aa3.66□□□□□ -1.82
SHH3YMR118C ALD6P54115 500 aaKnown RBP3.66□□□□□ -1.82
SHH3YMR118C IRC4Q03036 179 aa3.66□□□□□ -1.82
SHH3YMR118C BUL2Q03758 920 aaKnown RBP3.66□□□□□ -1.82
SHH3YMR118C DIB1Q06819 143 aaPredicted RBP3.66□□□□□ -1.82
SHH3YMR118C ACM1Q08981 209 aa3.66□□□□□ -1.82
SHH3YMR118C PSF3Q12146 194 aa3.66□□□□□ -1.82
SHH3YMR118C YVC1Q12324 675 aa3.66□□□□□ -1.82
SHH3YMR118C RTP1Q12751 981 aa3.66□□□□□ -1.82
SHH3YMR118C SWI6P09959 803 aa3.65□□□□□ -1.83
SHH3YMR118C SNF3P10870 884 aa3.65□□□□□ -1.83
SHH3YMR118C NAT1P12945 854 aaKnown RBP3.65□□□□□ -1.83
SHH3YMR118C SNA3P14359 133 aa3.65□□□□□ -1.83
SHH3YMR118C PFK1P16861 987 aaKnown RBP3.65□□□□□ -1.83
SHH3YMR118C MRPL25P23369 157 aa3.65□□□□□ -1.83
SHH3YMR118C LCB1P25045 558 aaKnown RBP3.65□□□□□ -1.83
SHH3YMR118C SPS22P25380 463 aa3.65□□□□□ -1.83
SHH3YMR118C SRO9P25567 434 aaKnown RBP3.65□□□□□ -1.83
SHH3YMR118C GPI10P30777 616 aa3.65□□□□□ -1.83
SHH3YMR118C SEC21P32074 935 aaKnown RBP3.65□□□□□ -1.83
SHH3YMR118C PYC2P32327 1180 aaKnown RBP3.65□□□□□ -1.83
SHH3YMR118C ISC10P32645 267 aa3.65□□□□□ -1.83
SHH3YMR118C YKL023WP36103 277 aaKnown RBP3.65□□□□□ -1.83
SHH3YMR118C CCL1P37366 393 aa3.65□□□□□ -1.83
SHH3YMR118C YBR032WP38223 100 aa3.65□□□□□ -1.83
SHH3YMR118C VHC1P38329 1120 aa3.65□□□□□ -1.83
SHH3YMR118C RFC3P38629 340 aa3.65□□□□□ -1.83
SHH3YMR118C PAN5P38787 379 aa3.65□□□□□ -1.83
SHH3YMR118C GAA1P39012 614 aa3.65□□□□□ -1.83
SHH3YMR118C SCS2P40075 244 aaKnown RBP3.65□□□□□ -1.83
SHH3YMR118C JEM1P40358 645 aa3.65□□□□□ -1.83
SHH3YMR118C NUP82P40368 713 aa3.65□□□□□ -1.83
SHH3YMR118C IAH1P41734 238 aa3.65□□□□□ -1.83
SHH3YMR118C SPO74P45819 413 aa3.65□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 30.5 ms