RNA–Protein interactions for RNA: YMR107W

SPG4, Transcript of Protein required for high temperature survival during stationary phase, yeastyeast

Gene SPG4, Length 348 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPG4YMR107W PDX3P38075 228 aaKnown RBP5.54□□□□□ -1.52
SPG4YMR107W UBP13P38187 747 aa5.54□□□□□ -1.52
SPG4YMR107W KAP104P38217 918 aaKnown RBP5.54□□□□□ -1.52
SPG4YMR107W SPC97P38863 823 aa5.54□□□□□ -1.52
SPG4YMR107W ASG1P40467 964 aa5.54□□□□□ -1.52
SPG4YMR107W SEC27P41811 889 aaKnown RBP5.54□□□□□ -1.52
SPG4YMR107W CLA4P48562 842 aa5.54□□□□□ -1.52
SPG4YMR107W UBP15P50101 1230 aa5.54□□□□□ -1.52
SPG4YMR107W ATP22P50273 684 aaPredicted RBP5.54□□□□□ -1.52
SPG4YMR107W LSC1P53598 329 aaKnown RBP5.54□□□□□ -1.52
SPG4YMR107W RTC4P53850 401 aa5.54□□□□□ -1.52
SPG4YMR107W RAD30Q04049 632 aa5.54□□□□□ -1.52
SPG4YMR107W TOS4Q06266 489 aa5.54□□□□□ -1.52
SPG4YMR107W RAD61Q99359 647 aa5.54□□□□□ -1.52
SPG4YMR107W FIG2P25653 1609 aa5.54□□□□□ -1.52
SPG4YMR107W MYO1P08964 1928 aa5.54□□□□□ -1.52
SPG4YMR107W FLO11P08640 1367 aa5.54□□□□□ -1.52
SPG4YMR107W RAD10P06838 210 aa5.53□□□□□ -1.52
SPG4YMR107W HSF1P10961 833 aa5.53□□□□□ -1.52
SPG4YMR107W YSC84P32793 468 aa5.53□□□□□ -1.52
SPG4YMR107W PEX2P32800 271 aa5.53□□□□□ -1.52
SPG4YMR107W PRP40P33203 583 aaKnown RBP5.53□□□□□ -1.52
SPG4YMR107W XRS2P33301 854 aa5.53□□□□□ -1.52
SPG4YMR107W KTR2P33550 425 aa5.53□□□□□ -1.52
SPG4YMR107W TIF3P34167 436 aaKnown RBP5.53□□□□□ -1.52
SPG4YMR107W COY1P34237 679 aa5.53□□□□□ -1.52
SPG4YMR107W HCS1P34243 683 aa5.53□□□□□ -1.52
SPG4YMR107W TRZ1P36159 838 aaPredicted RBP5.53□□□□□ -1.52
SPG4YMR107W JNM1P36224 373 aa5.53□□□□□ -1.52
SPG4YMR107W SLM4P38247 162 aa5.53□□□□□ -1.52
SPG4YMR107W MSG5P38590 489 aa5.53□□□□□ -1.52
SPG4YMR107W GUA1P38625 525 aaKnown RBP5.53□□□□□ -1.52
SPG4YMR107W YHR112CP38716 378 aa5.53□□□□□ -1.52
SPG4YMR107W SHC1P39000 512 aa5.53□□□□□ -1.52
SPG4YMR107W CAB2P40506 365 aa5.53□□□□□ -1.52
SPG4YMR107W MAM33P40513 266 aa5.53□□□□□ -1.52
SPG4YMR107W HXT8P40886 569 aa5.53□□□□□ -1.52
SPG4YMR107W RSM26P47141 266 aa5.53□□□□□ -1.52
SPG4YMR107W CTR1P49573 406 aa5.53□□□□□ -1.52
SPG4YMR107W PAN2P53010 1115 aaPredicted RBP5.53□□□□□ -1.52
SPG4YMR107W ZIP2P53061 704 aa5.53□□□□□ -1.52
SPG4YMR107W DCP2P53550 970 aaKnown RBP5.53□□□□□ -1.52
SPG4YMR107W YTP1P53584 459 aa5.53□□□□□ -1.52
SPG4YMR107W ASI2P53895 289 aa5.53□□□□□ -1.52
SPG4YMR107W YML108WQ03759 105 aa5.53□□□□□ -1.52
SPG4YMR107W YDR239CQ03780 787 aa5.53□□□□□ -1.52
SPG4YMR107W SGO1Q08490 590 aa5.53□□□□□ -1.52
SPG4YMR107W BUD7Q08754 746 aa5.53□□□□□ -1.52
SPG4YMR107W FAP7Q12055 197 aaPredicted RBP5.53□□□□□ -1.52
SPG4YMR107W NBL1Q3E7Y6 73 aa5.53□□□□□ -1.52
SPG4YMR107W NHA1Q99271 985 aa5.53□□□□□ -1.52
SPG4YMR107W CYB2P00175 591 aa5.52□□□□□ -1.53
SPG4YMR107W SSA2P10592 639 aaKnown RBP5.52□□□□□ -1.53
SPG4YMR107W THR4P16120 514 aaKnown RBP5.52□□□□□ -1.53
SPG4YMR107W CKA2P19454 339 aa5.52□□□□□ -1.53
SPG4YMR107W SFL1P20134 766 aa5.52□□□□□ -1.53
SPG4YMR107W GBP2P25555 427 aaKnown RBP RIP-Chip data5.52□□□□□ -1.53not detected
SPG4YMR107W HSP30P25619 332 aa5.52□□□□□ -1.53
SPG4YMR107W TYE7P33122 291 aaPredicted RBP5.52□□□□□ -1.53
SPG4YMR107W YKR078WP36158 585 aaKnown RBP5.52□□□□□ -1.53
SPG4YMR107W BOI1P38041 980 aaKnown RBP5.52□□□□□ -1.53
SPG4YMR107W YBP1P38315 674 aa5.52□□□□□ -1.53
SPG4YMR107W RRT2P38332 387 aa5.52□□□□□ -1.53
SPG4YMR107W PET100P38958 111 aa5.52□□□□□ -1.53
SPG4YMR107W SAK1P38990 1142 aa5.52□□□□□ -1.53
SPG4YMR107W RPH1P39956 796 aa5.52□□□□□ -1.53
SPG4YMR107W AVT6P40074 448 aa5.52□□□□□ -1.53
SPG4YMR107W RRD1P40454 393 aaKnown RBP5.52□□□□□ -1.53
SPG4YMR107W AIR1P40507 360 aaKnown RBP5.52□□□□□ -1.53
SPG4YMR107W ALA1P40825 983 aaKnown RBP5.52□□□□□ -1.53
SPG4YMR107W DIM1P41819 318 aaKnown RBP5.52□□□□□ -1.53
SPG4YMR107W FIG4P42837 879 aa5.52□□□□□ -1.53
SPG4YMR107W CIT3P43635 486 aa5.52□□□□□ -1.53
SPG4YMR107W TOS3P43637 560 aa5.52□□□□□ -1.53
SPG4YMR107W BIR1P47134 954 aa5.52□□□□□ -1.53
SPG4YMR107W MSN5P52918 1224 aa5.52□□□□□ -1.53
SPG4YMR107W HOP2P53187 214 aa5.52□□□□□ -1.53
SPG4YMR107W SFB2P53953 876 aa5.52□□□□□ -1.53
SPG4YMR107W SED5Q01590 340 aa5.52□□□□□ -1.53
SPG4YMR107W RAT1Q02792 1006 aaKnown RBP5.52□□□□□ -1.53
SPG4YMR107W SWP1Q02795 286 aa5.52□□□□□ -1.53
SPG4YMR107W RNY1Q02933 434 aaKnown RBP5.52□□□□□ -1.53
SPG4YMR107W PUS5Q06244 254 aa5.52□□□□□ -1.53
SPG4YMR107W IMH1Q06704 911 aaKnown RBP5.52□□□□□ -1.53
SPG4YMR107W ASA1Q06822 443 aa5.52□□□□□ -1.53
SPG4YMR107W DSE3Q08729 430 aa5.52□□□□□ -1.53
SPG4YMR107W SCM3Q12334 223 aa5.52□□□□□ -1.53
SPG4YMR107W WHI5Q12416 295 aa5.52□□□□□ -1.53
SPG4YMR107W TCB1Q12466 1186 aa5.52□□□□□ -1.53
SPG4YMR107W FLO1P32768 1537 aa5.52□□□□□ -1.53
SPG4YMR107W ATR1P13090 542 aa5.51□□□□□ -1.53
SPG4YMR107W OM45P16547 393 aa5.51□□□□□ -1.53
SPG4YMR107W NPP1P25353 742 aa5.51□□□□□ -1.53
SPG4YMR107W ICL1P28240 557 aaPredicted RBP5.51□□□□□ -1.53
SPG4YMR107W AFG2P32794 780 aa5.51□□□□□ -1.53
SPG4YMR107W MUM2P38236 366 aa5.51□□□□□ -1.53
SPG4YMR107W VHC1P38329 1120 aa5.51□□□□□ -1.53
SPG4YMR107W YBR285WP38354 144 aa5.51□□□□□ -1.53
SPG4YMR107W GOS1P38736 223 aa5.51□□□□□ -1.53
SPG4YMR107W ETP1P38748 585 aaKnown RBP5.51□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 156 ms