RNA–Protein interactions for RNA: YLR440C

SEC39, Transcript of Component of the Dsl1p tethering complex, yeast

Gene SEC39, Length 2,130 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC39	YLR440C	MIS1	P09440	975 aa	Known RBP	5.22	□□□□□ -1.57
SEC39	YLR440C	MRP7	P12687	371 aa		5.22	□□□□□ -1.57
SEC39	YLR440C	PRD1	P25375	712 aa		5.22	□□□□□ -1.57
SEC39	YLR440C	SEC21	P32074	935 aa	Known RBP	5.22	□□□□□ -1.57
SEC39	YLR440C	CDC12	P32468	407 aa	Known RBP	5.22	□□□□□ -1.57
SEC39	YLR440C	PMT1	P33775	817 aa		5.22	□□□□□ -1.57
SEC39	YLR440C	YUH1	P35127	236 aa		5.22	□□□□□ -1.57
SEC39	YLR440C	SRL3	P36167	246 aa		5.22	□□□□□ -1.57
SEC39	YLR440C	POL12	P38121	705 aa	Predicted RBP	5.22	□□□□□ -1.57
SEC39	YLR440C	RCR1	P38212	213 aa		5.22	□□□□□ -1.57
SEC39	YLR440C	RSC30	P38781	883 aa		5.22	□□□□□ -1.57
SEC39	YLR440C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	5.22	□□□□□ -1.57	not detected
SEC39	YLR440C	EDC3	P39998	551 aa	Known RBP	5.22	□□□□□ -1.57
SEC39	YLR440C	YER137C	P40083	148 aa	Known RBP	5.22	□□□□□ -1.57
SEC39	YLR440C	YRB2	P40517	327 aa		5.22	□□□□□ -1.57
SEC39	YLR440C	GFD1	Q04839	188 aa	Known RBP	5.22	□□□□□ -1.57
SEC39	YLR440C	RTT103	Q05543	409 aa		5.22	□□□□□ -1.57
SEC39	YLR440C	ECM7	Q06200	448 aa		5.22	□□□□□ -1.57
SEC39	YLR440C	GMC2	Q06201	188 aa		5.22	□□□□□ -1.57
SEC39	YLR440C	RTT10	Q08924	1013 aa		5.22	□□□□□ -1.57
SEC39	YLR440C	LAG2	Q92325	660 aa		5.22	□□□□□ -1.57
SEC39	YLR440C	LAM4	P38800	1345 aa		5.22	□□□□□ -1.57
SEC39	YLR440C	PET122	P10355	254 aa		5.21	□□□□□ -1.57
SEC39	YLR440C	HAP4	P14064	554 aa		5.21	□□□□□ -1.57
SEC39	YLR440C	YPK2	P18961	677 aa		5.21	□□□□□ -1.57
SEC39	YLR440C	CLN2	P20438	545 aa		5.21	□□□□□ -1.57
SEC39	YLR440C	RRP43	P25359	394 aa	Predicted RBP	5.21	□□□□□ -1.57
SEC39	YLR440C	TIM23	P32897	222 aa		5.21	□□□□□ -1.57
SEC39	YLR440C	JLP2	P40206	208 aa		5.21	□□□□□ -1.57
SEC39	YLR440C	CIT3	P43635	486 aa		5.21	□□□□□ -1.57
SEC39	YLR440C	LIA1	P47120	325 aa	Known RBP	5.21	□□□□□ -1.57
SEC39	YLR440C	TOF1	P53840	1238 aa		5.21	□□□□□ -1.57
SEC39	YLR440C	ADE16	P54113	591 aa	Known RBP	5.21	□□□□□ -1.57
SEC39	YLR440C	DAK1	P54838	584 aa	Known RBP	5.21	□□□□□ -1.57
SEC39	YLR440C	GTR1	Q00582	310 aa		5.21	□□□□□ -1.57
SEC39	YLR440C	ABZ2	Q03266	374 aa		5.21	□□□□□ -1.57
SEC39	YLR440C	ATG29	Q12092	213 aa		5.21	□□□□□ -1.57
SEC39	YLR440C	RRG1	Q12167	365 aa	Predicted RBP	5.21	□□□□□ -1.57
SEC39	YLR440C	AVL9	Q12500	764 aa		5.21	□□□□□ -1.57
SEC39	YLR440C	SIR4	P11978	1358 aa		5.21	□□□□□ -1.57
SEC39	YLR440C	HXK1	P04806	485 aa	Known RBP	5.21	□□□□□ -1.58
SEC39	YLR440C	RCY1	P39531	840 aa		5.21	□□□□□ -1.58
SEC39	YLR440C	SAW1	P39735	261 aa		5.21	□□□□□ -1.58
SEC39	YLR440C	BUD16	P39988	312 aa		5.21	□□□□□ -1.58
SEC39	YLR440C	DUG1	P43616	481 aa	Known RBP	5.21	□□□□□ -1.58
SEC39	YLR440C	HSH155	P49955	971 aa	Known RBP	5.21	□□□□□ -1.58
SEC39	YLR440C	GUP1	P53154	560 aa		5.21	□□□□□ -1.58
SEC39	YLR440C	YBP2	P53169	641 aa		5.21	□□□□□ -1.58
SEC39	YLR440C	YNL035C	P53962	389 aa	Known RBP	5.21	□□□□□ -1.58
SEC39	YLR440C	BET4	Q00618	327 aa		5.21	□□□□□ -1.58
SEC39	YLR440C	KAP120	Q02932	1032 aa		5.21	□□□□□ -1.58
SEC39	YLR440C	PKH3	Q03306	898 aa	Predicted RBP	5.21	□□□□□ -1.58
SEC39	YLR440C	SHE9	Q04172	456 aa		5.21	□□□□□ -1.58
SEC39	YLR440C	YPD1	Q07688	167 aa		5.21	□□□□□ -1.58
SEC39	YLR440C	GAS4	Q08271	471 aa		5.21	□□□□□ -1.58
SEC39	YLR440C	YOR296W	Q08748	1289 aa		5.21	□□□□□ -1.58
SEC39	YLR440C	SFI1	Q12369	946 aa		5.21	□□□□□ -1.58
SEC39	YLR440C	YKL068W-A	Q3E826	78 aa		5.21	□□□□□ -1.58
SEC39	YLR440C	PGK1	P00560	416 aa	Known RBP	5.2	□□□□□ -1.58
SEC39	YLR440C	KGD2	P19262	463 aa	Predicted RBP	5.2	□□□□□ -1.58
SEC39	YLR440C	CDC15	P27636	974 aa		5.2	□□□□□ -1.58
SEC39	YLR440C	OXP1	P28273	1286 aa		5.2	□□□□□ -1.58
SEC39	YLR440C	PTP2	P29461	750 aa		5.2	□□□□□ -1.58
SEC39	YLR440C	THI4	P32318	326 aa		5.2	□□□□□ -1.58
SEC39	YLR440C	YME1	P32795	747 aa		5.2	□□□□□ -1.58
SEC39	YLR440C	DHR2	P36009	735 aa	Predicted RBP	5.2	□□□□□ -1.58
SEC39	YLR440C	YER156C	P40093	338 aa	Known RBP	5.2	□□□□□ -1.58
SEC39	YLR440C	MND2	P40577	368 aa		5.2	□□□□□ -1.58
SEC39	YLR440C	YDL183C	P48569	320 aa		5.2	□□□□□ -1.58
SEC39	YLR440C	BSC5	P53755	489 aa		5.2	□□□□□ -1.58
SEC39	YLR440C	GOR1	P53839	350 aa		5.2	□□□□□ -1.58
SEC39	YLR440C	ESBP6	P53918	673 aa		5.2	□□□□□ -1.58
SEC39	YLR440C	VPS9	P54787	451 aa		5.2	□□□□□ -1.58
SEC39	YLR440C	JIP4	Q03361	876 aa		5.2	□□□□□ -1.58
SEC39	YLR440C	CWC15	Q03772	175 aa	Known RBP	5.2	□□□□□ -1.58
SEC39	YLR440C	SYF1	Q04048	859 aa	Predicted RBP	5.2	□□□□□ -1.58
SEC39	YLR440C	YCG1	Q06680	1035 aa		5.2	□□□□□ -1.58
SEC39	YLR440C	GRS2	Q06817	618 aa		5.2	□□□□□ -1.58
SEC39	YLR440C	HSH49	Q99181	213 aa	Predicted RBP	5.2	□□□□□ -1.58
SEC39	YLR440C	SNF2	P22082	1703 aa		5.2	□□□□□ -1.58
SEC39	YLR440C	LAT1	P12695	482 aa	Known RBP	5.2	□□□□□ -1.58
SEC39	YLR440C	MET8	P15807	274 aa		5.2	□□□□□ -1.58
SEC39	YLR440C	KNS1	P32350	737 aa	Predicted RBP	5.2	□□□□□ -1.58
SEC39	YLR440C	SMI1	P32566	505 aa		5.2	□□□□□ -1.58
SEC39	YLR440C	PHO11	P35842	467 aa		5.2	□□□□□ -1.58
SEC39	YLR440C	NUP133	P36161	1157 aa		5.2	□□□□□ -1.58
SEC39	YLR440C	CHK1	P38147	527 aa		5.2	□□□□□ -1.58
SEC39	YLR440C	SEA4	P38164	1038 aa		5.2	□□□□□ -1.58
SEC39	YLR440C	PHO12	P38693	467 aa		5.2	□□□□□ -1.58
SEC39	YLR440C	MDJ2	P42834	146 aa		5.2	□□□□□ -1.58
SEC39	YLR440C	POL31	P46957	487 aa		5.2	□□□□□ -1.58
SEC39	YLR440C	COX16	P47081	118 aa		5.2	□□□□□ -1.58
SEC39	YLR440C	HAM1	P47119	197 aa	Known RBP	5.2	□□□□□ -1.58
SEC39	YLR440C	YGR237C	P50089	785 aa		5.2	□□□□□ -1.58
SEC39	YLR440C	PSD2	P53037	1138 aa	Known RBP	5.2	□□□□□ -1.58
SEC39	YLR440C	MGR3	Q04472	501 aa		5.2	□□□□□ -1.58
SEC39	YLR440C	RSA3	Q05942	220 aa	Known RBP	5.2	□□□□□ -1.58
SEC39	YLR440C	ATG20	Q07528	640 aa		5.2	□□□□□ -1.58
SEC39	YLR440C	FMP40	Q08968	688 aa	Predicted RBP	5.2	□□□□□ -1.58
SEC39	YLR440C	FAL1	Q12099	399 aa	Known RBP	5.2	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms