RNA–Protein interactions for RNA: YLR421C

RPN13, Transcript of Subunit of the 19S regulatory particle of the 26S proteasome lid, yeast

Gene RPN13, Length 471 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN13	YLR421C	PTP1	P25044	335 aa		4.16	□□□□□ -1.74
RPN13	YLR421C	SAT4	P25333	603 aa	Known RBP	4.16	□□□□□ -1.74
RPN13	YLR421C	PPG1	P32838	368 aa		4.16	□□□□□ -1.74
RPN13	YLR421C	EBP2	P36049	427 aa	Known RBP	4.16	□□□□□ -1.74
RPN13	YLR421C	PMC1	P38929	1173 aa	Predicted RBP	4.16	□□□□□ -1.74
RPN13	YLR421C	DOT6	P40059	670 aa	Known RBP	4.16	□□□□□ -1.74
RPN13	YLR421C	SET2	P46995	733 aa	Known RBP	4.16	□□□□□ -1.74
RPN13	YLR421C	MPS3	P47069	682 aa		4.16	□□□□□ -1.74
RPN13	YLR421C	YGL081W	P53156	320 aa		4.16	□□□□□ -1.74
RPN13	YLR421C	BRE5	P53741	515 aa	Known RBP	4.16	□□□□□ -1.74
RPN13	YLR421C	LAM4	P38800	1345 aa		4.16	□□□□□ -1.74
RPN13	YLR421C	FEN2	P25621	512 aa	Known RBP	4.15	□□□□□ -1.75
RPN13	YLR421C	YMC1	P32331	307 aa		4.15	□□□□□ -1.75
RPN13	YLR421C	SEC6	P32844	805 aa		4.15	□□□□□ -1.75
RPN13	YLR421C	TOM20	P35180	183 aa		4.15	□□□□□ -1.75
RPN13	YLR421C	MNN4	P36044	1178 aa		4.15	□□□□□ -1.75
RPN13	YLR421C	NUG1	P40010	520 aa	Known RBP	4.15	□□□□□ -1.75
RPN13	YLR421C	XBP1	P40489	647 aa		4.15	□□□□□ -1.75
RPN13	YLR421C	BNA3	P47039	444 aa	Known RBP	4.15	□□□□□ -1.75
RPN13	YLR421C	RFX1	P48743	811 aa		4.15	□□□□□ -1.75
RPN13	YLR421C	ASN1	P49089	572 aa	Known RBP	4.15	□□□□□ -1.75
RPN13	YLR421C	RTS3	P53289	263 aa		4.15	□□□□□ -1.75
RPN13	YLR421C	ISA1	Q07821	250 aa	Predicted RBP	4.15	□□□□□ -1.75
RPN13	YLR421C	ADE5,7	P07244	802 aa	Known RBP	4.14	□□□□□ -1.75
RPN13	YLR421C	YIL077C	P40508	320 aa		4.14	□□□□□ -1.75
RPN13	YLR421C	AIM14	P53109	570 aa		4.14	□□□□□ -1.75
RPN13	YLR421C	POB3	Q04636	552 aa	Known RBP	4.14	□□□□□ -1.75
RPN13	YLR421C	BMS1	Q08965	1183 aa	Known RBP	4.14	□□□□□ -1.75
RPN13	YLR421C	GRX4	P32642	244 aa		4.13	□□□□□ -1.75
RPN13	YLR421C	UGP1	P32861	499 aa	Known RBP	4.13	□□□□□ -1.75
RPN13	YLR421C	SWE1	P32944	819 aa		4.13	□□□□□ -1.75
RPN13	YLR421C	CAB3	P36076	571 aa		4.13	□□□□□ -1.75
RPN13	YLR421C	CTP1	P38152	299 aa		4.13	□□□□□ -1.75
RPN13	YLR421C	KHA1	P40309	873 aa		4.13	□□□□□ -1.75
RPN13	YLR421C	PMT6	P42934	759 aa		4.13	□□□□□ -1.75
RPN13	YLR421C	MDM20	Q12387	796 aa	Known RBP	4.13	□□□□□ -1.75
RPN13	YLR421C	PGK1	P00560	416 aa	Known RBP	4.12	□□□□□ -1.75
RPN13	YLR421C	SSB1	P11484	613 aa	Known RBP	4.12	□□□□□ -1.75
RPN13	YLR421C	APL3	P38065	1025 aa		4.12	□□□□□ -1.75
RPN13	YLR421C	SSB2	P40150	613 aa	Known RBP	4.12	□□□□□ -1.75
RPN13	YLR421C	NUP82	P40368	713 aa		4.12	□□□□□ -1.75
RPN13	YLR421C	TAX4	P47030	604 aa		4.12	□□□□□ -1.75
RPN13	YLR421C	NET1	P47035	1189 aa		4.12	□□□□□ -1.75
RPN13	YLR421C	UTP14	Q04500	899 aa	Known RBP	4.12	□□□□□ -1.75
RPN13	YLR421C	YSH1	Q06224	779 aa	Predicted RBP	4.12	□□□□□ -1.75
RPN13	YLR421C	VPS36	Q06696	566 aa		4.12	□□□□□ -1.75
RPN13	YLR421C	ULA1	Q12059	462 aa		4.12	□□□□□ -1.75
RPN13	YLR421C	RKI1	Q12189	258 aa		4.12	□□□□□ -1.75
RPN13	YLR421C	HMG1	P12683	1054 aa		4.11	□□□□□ -1.75
RPN13	YLR421C	AKL1	P38080	1108 aa	Known RBP	4.11	□□□□□ -1.75
RPN13	YLR421C	ENP1	P38333	483 aa	Known RBP	4.11	□□□□□ -1.75
RPN13	YLR421C	SSZ1	P38788	538 aa	Known RBP	4.11	□□□□□ -1.75
RPN13	YLR421C	LTP1	P40347	161 aa		4.11	□□□□□ -1.75
RPN13	YLR421C	YJR008W	P47085	338 aa		4.11	□□□□□ -1.75
RPN13	YLR421C	DIP5	P53388	608 aa		4.11	□□□□□ -1.75
RPN13	YLR421C	HFD1	Q04458	532 aa		4.11	□□□□□ -1.75
RPN13	YLR421C	ATG33	Q06485	197 aa		4.11	□□□□□ -1.75
RPN13	YLR421C	POM34	Q12445	299 aa		4.11	□□□□□ -1.75
RPN13	YLR421C	SPP41	P38904	1435 aa		4.11	□□□□□ -1.75
RPN13	YLR421C	MON2	P48563	1636 aa	Predicted RBP	4.1	□□□□□ -1.75
RPN13	YLR421C	TPK2	P06245	380 aa		4.1	□□□□□ -1.75
RPN13	YLR421C	TSR4	P25040	408 aa		4.1	□□□□□ -1.75
RPN13	YLR421C	MSS1	P32559	526 aa	Predicted RBP	4.1	□□□□□ -1.75
RPN13	YLR421C	PEX6	P33760	1030 aa		4.1	□□□□□ -1.75
RPN13	YLR421C	COS111	P38308	924 aa		4.1	□□□□□ -1.75
RPN13	YLR421C	YHR202W	P38887	602 aa		4.1	□□□□□ -1.75
RPN13	YLR421C	MNN1	P39106	762 aa		4.1	□□□□□ -1.75
RPN13	YLR421C	UBP12	P39538	1254 aa		4.1	□□□□□ -1.75
RPN13	YLR421C	RGT2	Q12300	763 aa		4.1	□□□□□ -1.75
RPN13	YLR421C	TRM732	Q03496	1420 aa		4.1	□□□□□ -1.75
RPN13	YLR421C	ERG20	P08524	352 aa	Known RBP	4.09	□□□□□ -1.75
RPN13	YLR421C	PHO8	P11491	566 aa		4.09	□□□□□ -1.75
RPN13	YLR421C	SEC15	P22224	910 aa		4.09	□□□□□ -1.75
RPN13	YLR421C	APN1	P22936	367 aa		4.09	□□□□□ -1.75
RPN13	YLR421C	PCL2	P25693	308 aa		4.09	□□□□□ -1.75
RPN13	YLR421C	YJR142W	P47173	342 aa		4.09	□□□□□ -1.75
RPN13	YLR421C	YDR179W-A	Q03983	463 aa		4.09	□□□□□ -1.75
RPN13	YLR421C	YFT2	Q06676	274 aa		4.09	□□□□□ -1.75
RPN13	YLR421C	YLR125W	Q12138	136 aa		4.09	□□□□□ -1.75
RPN13	YLR421C	MSH2	P25847	964 aa		4.08	□□□□□ -1.76
RPN13	YLR421C	NTH1	P32356	751 aa		4.08	□□□□□ -1.76
RPN13	YLR421C	STH1	P32597	1359 aa		4.08	□□□□□ -1.76
RPN13	YLR421C	HSL1	P34244	1518 aa		4.08	□□□□□ -1.76
RPN13	YLR421C	ELF1	P36053	145 aa		4.08	□□□□□ -1.76
RPN13	YLR421C	YJR039W	P47107	1121 aa		4.08	□□□□□ -1.76
RPN13	YLR421C	SNF12	P53628	566 aa		4.08	□□□□□ -1.76
RPN13	YLR421C	GPD1	Q00055	391 aa	Known RBP	4.08	□□□□□ -1.76
RPN13	YLR421C	UFO1	Q04511	668 aa		4.08	□□□□□ -1.76
RPN13	YLR421C	TY1B-DR4	Q07793	1604 aa		4.08	□□□□□ -1.76
RPN13	YLR421C	VHS3	Q08438	674 aa		4.08	□□□□□ -1.76
RPN13	YLR421C	DCS2	Q12123	353 aa		4.08	□□□□□ -1.76
RPN13	YLR421C	GIN4	Q12263	1142 aa		4.08	□□□□□ -1.76
RPN13	YLR421C	THI4	P32318	326 aa		4.07	□□□□□ -1.76
RPN13	YLR421C	PCM1	P38628	557 aa	Known RBP	4.07	□□□□□ -1.76
RPN13	YLR421C	BIT61	P47041	543 aa		4.07	□□□□□ -1.76
RPN13	YLR421C	NGL2	Q03264	515 aa	Known RBP	4.07	□□□□□ -1.76
RPN13	YLR421C	YGR161W-C	Q3E744	92 aa		4.07	□□□□□ -1.76
RPN13	YLR421C	RPS9B	P05755	195 aa	Known RBP	4.06	□□□□□ -1.76
RPN13	YLR421C	FRS1	P15624	595 aa	Known RBP	4.06	□□□□□ -1.76
RPN13	YLR421C	SFL1	P20134	766 aa		4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 102 ms