RNA–Protein interactions for RNA: YLR411W

CTR3, Transcript of High-affinity copper transporter of the plasma membrane, yeastyeast

Gene CTR3, Length 726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTR3YLR411W MSE1P48525 536 aa6.18□□□□□ -1.42
CTR3YLR411W AIM14P53109 570 aa6.18□□□□□ -1.42
CTR3YLR411W MET13P53128 600 aa6.18□□□□□ -1.42
CTR3YLR411W NRG1Q03125 231 aa6.18□□□□□ -1.42
CTR3YLR411W TRM13Q12383 476 aa6.18□□□□□ -1.42
CTR3YLR411W RPO41P13433 1351 aaKnown RBP6.18□□□□□ -1.42
CTR3YLR411W SPC42P36094 363 aa6.17□□□□□ -1.42
CTR3YLR411W BRN1P38170 754 aa6.17□□□□□ -1.42
CTR3YLR411W MGS1P40151 587 aa6.17□□□□□ -1.42
CTR3YLR411W YJR142WP47173 342 aa6.17□□□□□ -1.42
CTR3YLR411W UBC9P50623 157 aaPredicted RBP6.17□□□□□ -1.42
CTR3YLR411W RPN7Q06103 429 aaKnown RBP6.17□□□□□ -1.42
CTR3YLR411W YLR040CQ07988 224 aa6.17□□□□□ -1.42
CTR3YLR411W GIN4Q12263 1142 aa6.17□□□□□ -1.42
CTR3YLR411W ADR1P07248 1323 aa6.17□□□□□ -1.42
CTR3YLR411W MET3P08536 511 aa6.16□□□□□ -1.42
CTR3YLR411W DAL5P15365 543 aa6.16□□□□□ -1.42
CTR3YLR411W MSP1P28737 362 aa6.16□□□□□ -1.42
CTR3YLR411W YBR259WP38338 688 aa6.16□□□□□ -1.42
CTR3YLR411W MIP6P38760 659 aaKnown RBP6.16□□□□□ -1.42
CTR3YLR411W DOT6P40059 670 aaKnown RBP6.16□□□□□ -1.42
CTR3YLR411W DLT1Q04216 342 aa6.16□□□□□ -1.42
CTR3YLR411W AUS1Q08409 1394 aa6.16□□□□□ -1.42
CTR3YLR411W CCR4P31384 837 aaKnown RBP6.15□□□□□ -1.42
CTR3YLR411W YKR018CP36114 725 aa6.15□□□□□ -1.42
CTR3YLR411W ELO3P40319 345 aa6.15□□□□□ -1.42
CTR3YLR411W PAP2P53632 584 aaKnown RBP6.15□□□□□ -1.42
CTR3YLR411W TGL5Q12043 749 aa6.15□□□□□ -1.42
CTR3YLR411W YGR161W-CQ3E744 92 aa6.15□□□□□ -1.42
CTR3YLR411W CAF20P12962 161 aaKnown RBP6.14□□□□□ -1.43
CTR3YLR411W ECM1P39715 212 aa6.14□□□□□ -1.43
CTR3YLR411W MAM1P40065 302 aa6.14□□□□□ -1.43
CTR3YLR411W MUP1P50276 574 aa6.14□□□□□ -1.43
CTR3YLR411W PCL10P53124 433 aa6.14□□□□□ -1.43
CTR3YLR411W YBP2P53169 641 aa6.14□□□□□ -1.43
CTR3YLR411W SDA1P53313 767 aaKnown RBP6.14□□□□□ -1.43
CTR3YLR411W ORC4P54791 529 aa6.14□□□□□ -1.43
CTR3YLR411W RTT109Q07794 436 aa6.14□□□□□ -1.43
CTR3YLR411W SUL1P38359 859 aa6.13□□□□□ -1.43
CTR3YLR411W CHS7P38843 316 aa6.13□□□□□ -1.43
CTR3YLR411W PRP31P49704 494 aaPredicted RBP6.13□□□□□ -1.43
CTR3YLR411W YNL050CP53952 270 aa6.13□□□□□ -1.43
CTR3YLR411W RNT1Q02555 471 aa6.13□□□□□ -1.43
CTR3YLR411W GUD1Q07729 489 aa6.13□□□□□ -1.43
CTR3YLR411W YOL073CQ08232 322 aa6.13□□□□□ -1.43
CTR3YLR411W ALG7P07286 448 aa6.12□□□□□ -1.43
CTR3YLR411W RAD50P12753 1312 aa6.12□□□□□ -1.43
CTR3YLR411W YBR053CP38235 358 aa6.12□□□□□ -1.43
CTR3YLR411W YIR042CP40586 236 aa6.12□□□□□ -1.43
CTR3YLR411W HLJ1P48353 224 aa6.12□□□□□ -1.43
CTR3YLR411W AMA1P50082 593 aa6.12□□□□□ -1.43
CTR3YLR411W ARP4P80428 489 aa6.12□□□□□ -1.43
CTR3YLR411W HIM1Q06674 414 aa6.12□□□□□ -1.43
CTR3YLR411W ADE6P38972 1358 aaKnown RBP6.11□□□□□ -1.43
CTR3YLR411W ADE2P21264 571 aaKnown RBP6.11□□□□□ -1.43
CTR3YLR411W PIL1P53252 339 aaKnown RBP6.11□□□□□ -1.43
CTR3YLR411W SLI1P53304 468 aa6.11□□□□□ -1.43
CTR3YLR411W TEX1P53851 422 aaKnown RBP6.11□□□□□ -1.43
CTR3YLR411W ARG5,6Q01217 863 aa6.11□□□□□ -1.43
CTR3YLR411W FRE5Q08908 694 aa6.11□□□□□ -1.43
CTR3YLR411W PPR1P07272 904 aaPredicted RBP6.1□□□□□ -1.43
CTR3YLR411W LAT1P12695 482 aaKnown RBP6.1□□□□□ -1.43
CTR3YLR411W APL2P36000 726 aaPredicted RBP6.1□□□□□ -1.43
CTR3YLR411W YNR029CP53729 429 aaKnown RBP6.1□□□□□ -1.43
CTR3YLR411W THI73Q07904 523 aa6.1□□□□□ -1.43
CTR3YLR411W PNS1Q12412 539 aa6.1□□□□□ -1.43
CTR3YLR411W ATG11Q12527 1178 aa6.1□□□□□ -1.43
CTR3YLR411W RPS19AP07280 144 aaKnown RBP6.09□□□□□ -1.43
CTR3YLR411W RPS19BP07281 144 aaPredicted RBP6.09□□□□□ -1.43
CTR3YLR411W AKL1P38080 1108 aaKnown RBP6.09□□□□□ -1.43
CTR3YLR411W YHR112CP38716 378 aa6.09□□□□□ -1.43
CTR3YLR411W CRP1P38845 465 aaKnown RBP6.09□□□□□ -1.43
CTR3YLR411W RIA1P53893 1110 aa6.09□□□□□ -1.43
CTR3YLR411W LEE1Q02799 301 aaKnown RBP6.09□□□□□ -1.43
CTR3YLR411W GAD1Q04792 585 aa6.09□□□□□ -1.43
CTR3YLR411W ADY4Q05955 493 aa6.09□□□□□ -1.43
CTR3YLR411W GID8P40208 455 aa6.08□□□□□ -1.44
CTR3YLR411W HOS4P40480 1083 aa6.08□□□□□ -1.44
CTR3YLR411W BAP3P41815 604 aa6.08□□□□□ -1.44
CTR3YLR411W BRE5P53741 515 aaKnown RBP6.08□□□□□ -1.44
CTR3YLR411W CTF4Q01454 927 aa6.08□□□□□ -1.44
CTR3YLR411W MCM21Q06675 368 aa6.08□□□□□ -1.44
CTR3YLR411W DCS2Q12123 353 aa6.08□□□□□ -1.44
CTR3YLR411W APC1P53886 1748 aa6.08□□□□□ -1.44
CTR3YLR411W SSD1P24276 1250 aaKnown RBP RIP-Chip data6.07□□□□□ -1.44not detected
CTR3YLR411W SSZ1P38788 538 aaKnown RBP6.07□□□□□ -1.44
CTR3YLR411W DJP1P40564 432 aa6.07□□□□□ -1.44
CTR3YLR411W YJL163CP46996 555 aa6.07□□□□□ -1.44
CTR3YLR411W YJR039WP47107 1121 aa6.07□□□□□ -1.44
CTR3YLR411W YJR096WP47137 282 aa6.07□□□□□ -1.44
CTR3YLR411W PMT3P47190 753 aa6.07□□□□□ -1.44
CTR3YLR411W NUP145P49687 1317 aa6.06□□□□□ -1.44
CTR3YLR411W CDC16P09798 840 aa6.06□□□□□ -1.44
CTR3YLR411W TRZ1P36159 838 aaPredicted RBP6.06□□□□□ -1.44
CTR3YLR411W CKB2P38930 258 aa6.06□□□□□ -1.44
CTR3YLR411W HYR1P40581 163 aaKnown RBP6.06□□□□□ -1.44
CTR3YLR411W DSD1P53095 428 aa6.06□□□□□ -1.44
CTR3YLR411W HMO1Q03973 246 aaKnown RBP6.06□□□□□ -1.44
CTR3YLR411W IRC13Q08630 104 aa6.06□□□□□ -1.44
CTR3YLR411W BNI1P41832 1953 aa6.06□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms